RNA–Protein interactions for RNA: ENST00000498509.2

PHF7-209, Transcript of PHD finger protein 7, humanhuman

TSL 1 (best)

Gene PHF7, Length 1,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF7-209ENST00000498509 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
PHF7-209ENST00000498509 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
PHF7-209ENST00000498509 CLIP1P30622 1438 aa12.72□□□□□ -0.37
PHF7-209ENST00000498509 ABCC8Q09428 1581 aa12.72□□□□□ -0.37
PHF7-209ENST00000498509 IPO9Q96P70 1041 aaKnown RBP12.72□□□□□ -0.37
PHF7-209ENST00000498509 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
PHF7-209ENST00000498509 NBR1Q14596 966 aa12.71□□□□□ -0.37
PHF7-209ENST00000498509 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
PHF7-209ENST00000498509 ANP32CO43423 234 aa12.71□□□□□ -0.38
PHF7-209ENST00000498509 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.38
PHF7-209ENST00000498509 ANP32AP39687 249 aaKnown RBP12.69□□□□□ -0.38
PHF7-209ENST00000498509 TOP2AP11388 1531 aaKnown RBP12.69□□□□□ -0.38
PHF7-209ENST00000498509 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
PHF7-209ENST00000498509 PEG3Q9GZU2 1588 aa12.68□□□□□ -0.38
PHF7-209ENST00000498509 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
PHF7-209ENST00000498509 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
PHF7-209ENST00000498509 SOGA1O94964 1423 aa12.67□□□□□ -0.38
PHF7-209ENST00000498509 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
PHF7-209ENST00000498509 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
PHF7-209ENST00000498509 SMARCA2P51531 1590 aa12.66□□□□□ -0.38
PHF7-209ENST00000498509 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
PHF7-209ENST00000498509 TRIM52Q96A61 297 aa12.65□□□□□ -0.38
PHF7-209ENST00000498509 KCNA4P22459 653 aa12.64□□□□□ -0.39
PHF7-209ENST00000498509 DDX10Q13206 875 aaKnown RBP12.63□□□□□ -0.39
PHF7-209ENST00000498509 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
PHF7-209ENST00000498509 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
PHF7-209ENST00000498509 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
PHF7-209ENST00000498509 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
PHF7-209ENST00000498509 WDR97A6NE52 1622 aa12.57□□□□□ -0.4
PHF7-209ENST00000498509 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
PHF7-209ENST00000498509 RUSC2Q8N2Y8 1516 aa12.53□□□□□ -0.4
PHF7-209ENST00000498509 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
PHF7-209ENST00000498509 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
PHF7-209ENST00000498509 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
PHF7-209ENST00000498509 NEFMP07197 916 aa12.5□□□□□ -0.41
PHF7-209ENST00000498509 GSE1Q14687 1217 aa12.5□□□□□ -0.41
PHF7-209ENST00000498509 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
PHF7-209ENST00000498509 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
PHF7-209ENST00000498509 B4GALNT3Q6L9W6 998 aa12.48□□□□□ -0.41
PHF7-209ENST00000498509 SYNJ1O43426 1573 aa12.48□□□□□ -0.41
PHF7-209ENST00000498509 ADRA2BP18089 450 aa12.47□□□□□ -0.41
PHF7-209ENST00000498509 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
PHF7-209ENST00000498509 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
PHF7-209ENST00000498509 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
PHF7-209ENST00000498509 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
PHF7-209ENST00000498509 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
PHF7-209ENST00000498509 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
PHF7-209ENST00000498509 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
PHF7-209ENST00000498509 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
PHF7-209ENST00000498509 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
PHF7-209ENST00000498509 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
PHF7-209ENST00000498509 SMG6Q86US8 1419 aaKnown RBP12.41□□□□□ -0.42
PHF7-209ENST00000498509 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
PHF7-209ENST00000498509 MS4A1P11836 297 aa12.4□□□□□ -0.42
PHF7-209ENST00000498509 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
PHF7-209ENST00000498509 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.42
PHF7-209ENST00000498509 ARAP1Q96P48 1450 aa12.39□□□□□ -0.43
PHF7-209ENST00000498509 NCOA2Q15596 1464 aa12.38□□□□□ -0.43
PHF7-209ENST00000498509 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
PHF7-209ENST00000498509 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
PHF7-209ENST00000498509 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
PHF7-209ENST00000498509 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
PHF7-209ENST00000498509 CNTLNQ9NXG0 1405 aa12.31□□□□□ -0.44
PHF7-209ENST00000498509 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
PHF7-209ENST00000498509 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
PHF7-209ENST00000498509 NFKBIBQ15653 356 aa12.31□□□□□ -0.44
PHF7-209ENST00000498509 KANK4Q5T7N3 995 aaPredicted RBP12.31□□□□□ -0.44
PHF7-209ENST00000498509 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
PHF7-209ENST00000498509 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
PHF7-209ENST00000498509 PDE4AP27815 886 aa12.28□□□□□ -0.44
PHF7-209ENST00000498509 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
PHF7-209ENST00000498509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
PHF7-209ENST00000498509 CFTRP13569 1480 aa12.27□□□□□ -0.44
PHF7-209ENST00000498509 HSP90AA1P07900 732 aaKnown RBP12.27□□□□□ -0.45
PHF7-209ENST00000498509 SIN3AQ96ST3 1273 aa12.27□□□□□ -0.45
PHF7-209ENST00000498509 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
PHF7-209ENST00000498509 PRXQ9BXM0 1461 aa12.25□□□□□ -0.45
PHF7-209ENST00000498509 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
PHF7-209ENST00000498509 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
PHF7-209ENST00000498509 L1TD1Q5T7N2 865 aaKnown RBP12.25□□□□□ -0.45
PHF7-209ENST00000498509 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
PHF7-209ENST00000498509 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
PHF7-209ENST00000498509 CLCN1P35523 988 aa12.21□□□□□ -0.45
PHF7-209ENST00000498509 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
PHF7-209ENST00000498509 AKNAQ7Z591 1439 aa12.21□□□□□ -0.46
PHF7-209ENST00000498509 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
PHF7-209ENST00000498509 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
PHF7-209ENST00000498509 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
PHF7-209ENST00000498509 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
PHF7-209ENST00000498509 HIRIP3Q9BW71 556 aaPredicted RBP12.18□□□□□ -0.46
PHF7-209ENST00000498509 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
PHF7-209ENST00000498509 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
PHF7-209ENST00000498509 RRAGDQ9NQL2 400 aaPredicted RBP12.18□□□□□ -0.46
PHF7-209ENST00000498509 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
PHF7-209ENST00000498509 NCOA1Q15788 1441 aa12.17□□□□□ -0.46
PHF7-209ENST00000498509 AAMPQ13685 434 aa12.16□□□□□ -0.46
PHF7-209ENST00000498509 SLC4A1APQ9BWU0 796 aaKnown RBP12.16□□□□□ -0.46
PHF7-209ENST00000498509 UACAQ9BZF9 1416 aa12.16□□□□□ -0.46
PHF7-209ENST00000498509 FGD1P98174 961 aa12.15□□□□□ -0.46
PHF7-209ENST00000498509 PDCL3Q9H2J4 239 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms