RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 JPH4Q96JJ6 628 aa28.16■■■□□ 2.1
ABCF3-218ENST00000498136 KIAA0586Q9BVV6 1533 aa28.14■■■□□ 2.1
ABCF3-218ENST00000498136 PRG4Q92954 1404 aaPredicted RBP28.14■■■□□ 2.1
ABCF3-218ENST00000498136 RAPGEF2Q9Y4G8 1499 aa28.13■■■□□ 2.09
ABCF3-218ENST00000498136 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
ABCF3-218ENST00000498136 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
ABCF3-218ENST00000498136 PRXQ9BXM0 1461 aa27.95■■■□□ 2.06
ABCF3-218ENST00000498136 EEA1Q15075 1411 aa27.94■■■□□ 2.06
ABCF3-218ENST00000498136 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
ABCF3-218ENST00000498136 CTTNBP2Q8WZ74 1663 aa27.93■■■□□ 2.06
ABCF3-218ENST00000498136 FAM9AQ8IZU1 332 aaPredicted RBP27.92■■■□□ 2.06
ABCF3-218ENST00000498136 CARMIL2Q6F5E8 1435 aa27.89■■■□□ 2.06
ABCF3-218ENST00000498136 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
ABCF3-218ENST00000498136 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
ABCF3-218ENST00000498136 UGGT2Q9NYU1 1516 aa27.81■■■□□ 2.04
ABCF3-218ENST00000498136 PTPRGP23470 1445 aa27.78■■■□□ 2.04
ABCF3-218ENST00000498136 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
ABCF3-218ENST00000498136 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
ABCF3-218ENST00000498136 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
ABCF3-218ENST00000498136 ADCY10Q96PN6 1610 aa27.72■■■□□ 2.03
ABCF3-218ENST00000498136 NPM1P06748 294 aaKnown RBP eCLIP27.71■■■□□ 2.03
ABCF3-218ENST00000498136 KIF21BO75037 1637 aa27.68■■■□□ 2.02
ABCF3-218ENST00000498136 GOLGA3Q08378 1498 aa27.68■■■□□ 2.02
ABCF3-218ENST00000498136 EHMT2Q96KQ7 1210 aa27.62■■■□□ 2.01
ABCF3-218ENST00000498136 UACAQ9BZF9 1416 aa27.58■■■□□ 2
ABCF3-218ENST00000498136 RANGAP1P46060 587 aaPredicted RBP27.57■■■□□ 2
ABCF3-218ENST00000498136 MAPKBP1O60336 1514 aa27.54■■■□□ 2
ABCF3-218ENST00000498136 P3H3Q8IVL6 736 aa27.54■■■□□ 2
ABCF3-218ENST00000498136 ABCC2Q92887 1545 aa27.54■■■□□ 2
ABCF3-218ENST00000498136 UHRF1BP1LA0JNW5 1464 aa27.53■■■□□ 2
ABCF3-218ENST00000498136 UBTFP17480 764 aaKnown RBP27.51■■□□□ 1.99
ABCF3-218ENST00000498136 KIF13AQ9H1H9 1805 aa27.5■■□□□ 1.99
ABCF3-218ENST00000498136 SAMD9Q5K651 1589 aa27.49■■□□□ 1.99
ABCF3-218ENST00000498136 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
ABCF3-218ENST00000498136 ABCC10Q5T3U5 1492 aa27.44■■□□□ 1.98
ABCF3-218ENST00000498136 FAM69CQ0P6D2 419 aa27.43■■□□□ 1.98
ABCF3-218ENST00000498136 ZCCHC11Q5TAX3 1644 aaKnown RBP27.42■■□□□ 1.98
ABCF3-218ENST00000498136 ABCA8O94911 1581 aa27.41■■□□□ 1.98
ABCF3-218ENST00000498136 DIP2BQ9P265 1576 aa27.41■■□□□ 1.98
ABCF3-218ENST00000498136 KDM5BQ9UGL1 1544 aa27.41■■□□□ 1.98
ABCF3-218ENST00000498136 ASXL2Q76L83 1435 aa27.39■■□□□ 1.97
ABCF3-218ENST00000498136 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
ABCF3-218ENST00000498136 EFCAB5A4FU69 1503 aa27.36■■□□□ 1.97
ABCF3-218ENST00000498136 RAPGEF6Q8TEU7 1601 aa27.3■■□□□ 1.96
ABCF3-218ENST00000498136 TSPOAP1O95153 1857 aa27.29■■□□□ 1.96
ABCF3-218ENST00000498136 ARID3CA6NKF2 412 aa27.28■■□□□ 1.96
ABCF3-218ENST00000498136 WDR7Q9Y4E6 1490 aa27.23■■□□□ 1.95
ABCF3-218ENST00000498136 EPRSP07814 1512 aaKnown RBP27.21■■□□□ 1.95
ABCF3-218ENST00000498136 GLI2P10070 1586 aa27.21■■□□□ 1.95
ABCF3-218ENST00000498136 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
ABCF3-218ENST00000498136 ATP10BO94823 1461 aa27.19■■□□□ 1.94
ABCF3-218ENST00000498136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.18■■□□□ 1.94
ABCF3-218ENST00000498136 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
ABCF3-218ENST00000498136 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
ABCF3-218ENST00000498136 NUP153P49790 1475 aaKnown RBP27.14■■□□□ 1.94
ABCF3-218ENST00000498136 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
ABCF3-218ENST00000498136 MAP3K4Q9Y6R4 1608 aa27.12■■□□□ 1.93
ABCF3-218ENST00000498136 ATP1B4Q9UN42 357 aaPredicted RBP27.09■■□□□ 1.93
ABCF3-218ENST00000498136 PPRC1Q5VV67 1664 aaKnown RBP27.08■■□□□ 1.92
ABCF3-218ENST00000498136 KDM6BO15054 1643 aa27.05■■□□□ 1.92
ABCF3-218ENST00000498136 CFAP43Q8NDM7 1665 aa27.05■■□□□ 1.92
ABCF3-218ENST00000498136 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
ABCF3-218ENST00000498136 CLIP1P30622 1438 aa27.02■■□□□ 1.92
ABCF3-218ENST00000498136 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
ABCF3-218ENST00000498136 CD109Q6YHK3 1445 aa27■■□□□ 1.91
ABCF3-218ENST00000498136 CDK13Q14004 1512 aaKnown RBP27■■□□□ 1.91
ABCF3-218ENST00000498136 PLEKHD1A6NEE1 506 aa26.99■■□□□ 1.91
ABCF3-218ENST00000498136 ABCA9Q8IUA7 1624 aa26.93■■□□□ 1.9
ABCF3-218ENST00000498136 PCF11O94913 1555 aaKnown RBP26.92■■□□□ 1.9
ABCF3-218ENST00000498136 MAGI3Q5TCQ9 1506 aa26.91■■□□□ 1.9
ABCF3-218ENST00000498136 LOC105371045A0A1W2PR82 267 aa26.89■■□□□ 1.9
ABCF3-218ENST00000498136 LRRIQ1Q96JM4 1722 aa26.88■■□□□ 1.89
ABCF3-218ENST00000498136 CEP162Q5TB80 1403 aa26.87■■□□□ 1.89
ABCF3-218ENST00000498136 CASKIN1Q8WXD9 1431 aa26.86■■□□□ 1.89
ABCF3-218ENST00000498136 CDK11AQ9UQ88 783 aaPredicted RBP26.85■■□□□ 1.89
ABCF3-218ENST00000498136 FYCO1Q9BQS8 1478 aa26.81■■□□□ 1.88
ABCF3-218ENST00000498136 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
ABCF3-218ENST00000498136 COL17A1Q9UMD9 1497 aaPredicted RBP26.8■■□□□ 1.88
ABCF3-218ENST00000498136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.8■■□□□ 1.88
ABCF3-218ENST00000498136 TTC37Q6PGP7 1564 aa26.78■■□□□ 1.88
ABCF3-218ENST00000498136 KIF14Q15058 1648 aa26.74■■□□□ 1.87
ABCF3-218ENST00000498136 TROQ12816 1431 aaPredicted RBP26.73■■□□□ 1.87
ABCF3-218ENST00000498136 NEO1Q92859 1461 aa26.71■■□□□ 1.87
ABCF3-218ENST00000498136 PHLDB1Q86UU1 1377 aa26.7■■□□□ 1.86
ABCF3-218ENST00000498136 CFAP74Q9C0B2 1584 aa26.69■■□□□ 1.86
ABCF3-218ENST00000498136 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
ABCF3-218ENST00000498136 MYO5CQ9NQX4 1742 aa26.68■■□□□ 1.86
ABCF3-218ENST00000498136 FANCAO15360 1455 aa26.67■■□□□ 1.86
ABCF3-218ENST00000498136 PLCH2O75038 1416 aa26.61■■□□□ 1.85
ABCF3-218ENST00000498136 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
ABCF3-218ENST00000498136 RAPGEF3O95398 923 aa26.59■■□□□ 1.85
ABCF3-218ENST00000498136 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
ABCF3-218ENST00000498136 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
ABCF3-218ENST00000498136 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
ABCF3-218ENST00000498136 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
ABCF3-218ENST00000498136 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
ABCF3-218ENST00000498136 DENND4BO75064 1496 aaPredicted RBP26.55■■□□□ 1.84
ABCF3-218ENST00000498136 ADGRL1O94910 1474 aa26.53■■□□□ 1.84
ABCF3-218ENST00000498136 FRMPD1Q5SYB0 1578 aa26.53■■□□□ 1.84
ABCF3-218ENST00000498136 RICTORQ6R327 1708 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms