RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 SLC4A1APQ9BWU0 796 aaKnown RBP9.79□□□□□ -0.84
MACF1-226ENST00000497964 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
MACF1-226ENST00000497964 CCNB3Q8WWL7 1395 aa9.78□□□□□ -0.84
MACF1-226ENST00000497964 WIZO95785 1651 aa9.78□□□□□ -0.84
MACF1-226ENST00000497964 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
MACF1-226ENST00000497964 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
MACF1-226ENST00000497964 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
MACF1-226ENST00000497964 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
MACF1-226ENST00000497964 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
MACF1-226ENST00000497964 EIF5BO60841 1220 aaKnown RBP9.76□□□□□ -0.85
MACF1-226ENST00000497964 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
MACF1-226ENST00000497964 NACADO15069 1562 aa9.73□□□□□ -0.85
MACF1-226ENST00000497964 DHX57Q6P158 1386 aaKnown RBP9.72□□□□□ -0.85
MACF1-226ENST00000497964 FBLN2P98095 1184 aa9.72□□□□□ -0.85
MACF1-226ENST00000497964 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.85
MACF1-226ENST00000497964 RAB3GAP2Q9H2M9 1393 aa9.71□□□□□ -0.85
MACF1-226ENST00000497964 KDM2AQ9Y2K7 1162 aa9.71□□□□□ -0.86
MACF1-226ENST00000497964 CCER2I3L3R5 266 aa9.69□□□□□ -0.86
MACF1-226ENST00000497964 KIF27Q86VH2 1401 aa9.69□□□□□ -0.86
MACF1-226ENST00000497964 RTN4Q9NQC3 1192 aaKnown RBP9.68□□□□□ -0.86
MACF1-226ENST00000497964 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
MACF1-226ENST00000497964 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
MACF1-226ENST00000497964 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
MACF1-226ENST00000497964 CANXP27824 592 aaKnown RBP9.66□□□□□ -0.86
MACF1-226ENST00000497964 DEKP35659 375 aaKnown RBP9.66□□□□□ -0.86
MACF1-226ENST00000497964 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
MACF1-226ENST00000497964 NOP58Q9Y2X3 529 aaKnown RBP9.66□□□□□ -0.86
MACF1-226ENST00000497964 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
MACF1-226ENST00000497964 ARXQ96QS3 562 aa9.64□□□□□ -0.87
MACF1-226ENST00000497964 HSPA5P11021 654 aaKnown RBP9.63□□□□□ -0.87
MACF1-226ENST00000497964 TIMELESSQ9UNS1 1208 aa9.63□□□□□ -0.87
MACF1-226ENST00000497964 FOXD1Q16676 465 aa9.62□□□□□ -0.87
MACF1-226ENST00000497964 TOP2AP11388 1531 aaKnown RBP9.6□□□□□ -0.87
MACF1-226ENST00000497964 NEFMP07197 916 aa9.59□□□□□ -0.87
MACF1-226ENST00000497964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.59□□□□□ -0.879e-7■■■■□ 25.6
MACF1-226ENST00000497964 CARMIL1Q5VZK9 1371 aa9.58□□□□□ -0.88
MACF1-226ENST00000497964 RGL3Q3MIN7 710 aa9.57□□□□□ -0.88
MACF1-226ENST00000497964 CUX2O14529 1486 aa9.56□□□□□ -0.88
MACF1-226ENST00000497964 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
MACF1-226ENST00000497964 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
MACF1-226ENST00000497964 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
MACF1-226ENST00000497964 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
MACF1-226ENST00000497964 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
MACF1-226ENST00000497964 RGS3P49796 1198 aa9.52□□□□□ -0.89
MACF1-226ENST00000497964 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
MACF1-226ENST00000497964 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.51□□□□□ -0.89
MACF1-226ENST00000497964 ARHGAP35Q9NRY4 1499 aa9.51□□□□□ -0.89
MACF1-226ENST00000497964 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
MACF1-226ENST00000497964 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
MACF1-226ENST00000497964 PPM1GO15355 546 aaPredicted RBP9.5□□□□□ -0.89
MACF1-226ENST00000497964 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
MACF1-226ENST00000497964 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
MACF1-226ENST00000497964 MPHOSPH9Q99550 1183 aa9.49□□□□□ -0.89
MACF1-226ENST00000497964 CFDP1Q9UEE9 299 aaPredicted RBP9.49□□□□□ -0.89
MACF1-226ENST00000497964 SMARCA2P51531 1590 aa9.49□□□□□ -0.89
MACF1-226ENST00000497964 KIF21BO75037 1637 aa9.48□□□□□ -0.89
MACF1-226ENST00000497964 SMARCA4P51532 1647 aa9.47□□□□□ -0.89
MACF1-226ENST00000497964 FANCIQ9NVI1 1328 aa9.47□□□□□ -0.89
MACF1-226ENST00000497964 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
MACF1-226ENST00000497964 PRKRIP1Q9H875 184 aaPredicted RBP9.47□□□□□ -0.89
MACF1-226ENST00000497964 HSP90AA1P07900 732 aaKnown RBP9.47□□□□□ -0.89
MACF1-226ENST00000497964 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
MACF1-226ENST00000497964 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
MACF1-226ENST00000497964 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.46□□□□□ -0.89
MACF1-226ENST00000497964 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.9
MACF1-226ENST00000497964 NUDCQ9Y266 331 aa9.45□□□□□ -0.9
MACF1-226ENST00000497964 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
MACF1-226ENST00000497964 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
MACF1-226ENST00000497964 PHLDB1Q86UU1 1377 aa9.43□□□□□ -0.9
MACF1-226ENST00000497964 ARAP1Q96P48 1450 aa9.42□□□□□ -0.9
MACF1-226ENST00000497964 PKD2Q13563 968 aa9.42□□□□□ -0.9
MACF1-226ENST00000497964 FMN1Q68DA7 1419 aa9.42□□□□□ -0.9
MACF1-226ENST00000497964 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
MACF1-226ENST00000497964 MSH5O43196 834 aa9.41□□□□□ -0.9
MACF1-226ENST00000497964 KNSTRNQ9Y448 316 aa9.41□□□□□ -0.9
MACF1-226ENST00000497964 ATAD2BQ9ULI0 1458 aa9.41□□□□□ -0.9
MACF1-226ENST00000497964 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
MACF1-226ENST00000497964 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
MACF1-226ENST00000497964 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
MACF1-226ENST00000497964 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.9
MACF1-226ENST00000497964 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.91
MACF1-226ENST00000497964 TCERG1O14776 1098 aaKnown RBP9.39□□□□□ -0.91
MACF1-226ENST00000497964 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
MACF1-226ENST00000497964 BECN1Q14457 450 aa9.39□□□□□ -0.91
MACF1-226ENST00000497964 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
MACF1-226ENST00000497964 PHF23Q9BUL5 403 aaPredicted RBP9.39□□□□□ -0.91
MACF1-226ENST00000497964 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
MACF1-226ENST00000497964 PLIN1O60240 522 aa9.38□□□□□ -0.91
MACF1-226ENST00000497964 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
MACF1-226ENST00000497964 EXOC6Q8TAG9 804 aa9.38□□□□□ -0.91
MACF1-226ENST00000497964 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
MACF1-226ENST00000497964 RRBP1Q9P2E9 1410 aaKnown RBP9.38□□□□□ -0.91
MACF1-226ENST00000497964 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
MACF1-226ENST00000497964 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
MACF1-226ENST00000497964 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
MACF1-226ENST00000497964 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
MACF1-226ENST00000497964 PDE4AP27815 886 aa9.36□□□□□ -0.91
MACF1-226ENST00000497964 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
MACF1-226ENST00000497964 GLIPR1L2Q4G1C9 344 aa9.36□□□□□ -0.91
MACF1-226ENST00000497964 IGF1RP08069 1367 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms