RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
NUP50-219ENST00000497960 RUSC2Q8N2Y8 1516 aa26.07■■□□□ 1.76
NUP50-219ENST00000497960 TRHP20396 242 aaPredicted RBP26.05■■□□□ 1.76
NUP50-219ENST00000497960 KIAA0586Q9BVV6 1533 aa26.04■■□□□ 1.76
NUP50-219ENST00000497960 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
NUP50-219ENST00000497960 IQGAP2Q13576 1575 aa25.82■■□□□ 1.72
NUP50-219ENST00000497960 CARMIL2Q6F5E8 1435 aa25.81■■□□□ 1.72
NUP50-219ENST00000497960 NPM1P06748 294 aaKnown RBP eCLIP25.77■■□□□ 1.72
NUP50-219ENST00000497960 PTPRGP23470 1445 aa25.76■■□□□ 1.71
NUP50-219ENST00000497960 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
NUP50-219ENST00000497960 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
NUP50-219ENST00000497960 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
NUP50-219ENST00000497960 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
NUP50-219ENST00000497960 UGGT2Q9NYU1 1516 aa25.68■■□□□ 1.7
NUP50-219ENST00000497960 EEA1Q15075 1411 aa25.67■■□□□ 1.7
NUP50-219ENST00000497960 DISP1Q96F81 1524 aa25.66■■□□□ 1.7
NUP50-219ENST00000497960 ADCY10Q96PN6 1610 aa25.66■■□□□ 1.7
NUP50-219ENST00000497960 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
NUP50-219ENST00000497960 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
NUP50-219ENST00000497960 MAPKBP1O60336 1514 aa25.58■■□□□ 1.68
NUP50-219ENST00000497960 KIAA0556O60303 1618 aa25.57■■□□□ 1.68
NUP50-219ENST00000497960 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
NUP50-219ENST00000497960 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
NUP50-219ENST00000497960 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
NUP50-219ENST00000497960 FAM69CQ0P6D2 419 aa25.54■■□□□ 1.68
NUP50-219ENST00000497960 UHRF1BP1LA0JNW5 1464 aa25.53■■□□□ 1.68
NUP50-219ENST00000497960 ABCC10Q5T3U5 1492 aa25.53■■□□□ 1.68
NUP50-219ENST00000497960 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
NUP50-219ENST00000497960 KIF13AQ9H1H9 1805 aa25.48■■□□□ 1.67
NUP50-219ENST00000497960 DIP2BQ9P265 1576 aa25.43■■□□□ 1.66
NUP50-219ENST00000497960 PLB1Q6P1J6 1458 aa25.4■■□□□ 1.66
NUP50-219ENST00000497960 ASXL2Q76L83 1435 aa25.4■■□□□ 1.66
NUP50-219ENST00000497960 KDM5BQ9UGL1 1544 aa25.39■■□□□ 1.66
NUP50-219ENST00000497960 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
NUP50-219ENST00000497960 KIF21BO75037 1637 aa25.36■■□□□ 1.65
NUP50-219ENST00000497960 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
NUP50-219ENST00000497960 ABCA8O94911 1581 aa25.31■■□□□ 1.64
NUP50-219ENST00000497960 ZCCHC11Q5TAX3 1644 aaKnown RBP25.3■■□□□ 1.64
NUP50-219ENST00000497960 SAMD9Q5K651 1589 aa25.28■■□□□ 1.64
NUP50-219ENST00000497960 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
NUP50-219ENST00000497960 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
NUP50-219ENST00000497960 GLI2P10070 1586 aa25.25■■□□□ 1.63
NUP50-219ENST00000497960 TSPOAP1O95153 1857 aa25.23■■□□□ 1.63
NUP50-219ENST00000497960 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
NUP50-219ENST00000497960 WDR7Q9Y4E6 1490 aa25.22■■□□□ 1.63
NUP50-219ENST00000497960 ARID3CA6NKF2 412 aa25.19■■□□□ 1.62
NUP50-219ENST00000497960 FHOD3Q2V2M9 1422 aa25.19■■□□□ 1.62
NUP50-219ENST00000497960 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
NUP50-219ENST00000497960 KCNH8Q96L42 1107 aa25.16■■□□□ 1.62
NUP50-219ENST00000497960 ATP10BO94823 1461 aa25.14■■□□□ 1.61
NUP50-219ENST00000497960 KDM6BO15054 1643 aa25.12■■□□□ 1.61
NUP50-219ENST00000497960 RAPGEF6Q8TEU7 1601 aa25.12■■□□□ 1.61
NUP50-219ENST00000497960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.11■■□□□ 1.61
NUP50-219ENST00000497960 HNRNPUL2Q1KMD3 747 aaKnown RBP25.11■■□□□ 1.61
NUP50-219ENST00000497960 MAP3K4Q9Y6R4 1608 aa25.09■■□□□ 1.61
NUP50-219ENST00000497960 TEX14Q8IWB6 1497 aa25.09■■□□□ 1.61
NUP50-219ENST00000497960 PPRC1Q5VV67 1664 aaKnown RBP25.07■■□□□ 1.6
NUP50-219ENST00000497960 NUP153P49790 1475 aaKnown RBP25.05■■□□□ 1.6
NUP50-219ENST00000497960 CD109Q6YHK3 1445 aa25.04■■□□□ 1.6
NUP50-219ENST00000497960 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
NUP50-219ENST00000497960 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
NUP50-219ENST00000497960 MAGI3Q5TCQ9 1506 aa24.98■■□□□ 1.59
NUP50-219ENST00000497960 AEBP2Q6ZN18 517 aaPredicted RBP24.98■■□□□ 1.59
NUP50-219ENST00000497960 FMN1Q68DA7 1419 aa24.97■■□□□ 1.59
NUP50-219ENST00000497960 PLEKHD1A6NEE1 506 aa24.97■■□□□ 1.59
NUP50-219ENST00000497960 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
NUP50-219ENST00000497960 COL17A1Q9UMD9 1497 aaPredicted RBP24.92■■□□□ 1.58
NUP50-219ENST00000497960 ABCA9Q8IUA7 1624 aa24.88■■□□□ 1.57
NUP50-219ENST00000497960 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
NUP50-219ENST00000497960 CDK13Q14004 1512 aaKnown RBP24.84■■□□□ 1.57
NUP50-219ENST00000497960 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
NUP50-219ENST00000497960 CDK11AQ9UQ88 783 aaPredicted RBP24.82■■□□□ 1.56
NUP50-219ENST00000497960 CLIP1P30622 1438 aa24.78■■□□□ 1.56
NUP50-219ENST00000497960 NEO1Q92859 1461 aa24.77■■□□□ 1.56
NUP50-219ENST00000497960 ARAP3Q8WWN8 1544 aa24.76■■□□□ 1.55
NUP50-219ENST00000497960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
NUP50-219ENST00000497960 CASKIN1Q8WXD9 1431 aa24.73■■□□□ 1.55
NUP50-219ENST00000497960 KDM4FA0A1W2PPD8 638 aa24.71■■□□□ 1.55
NUP50-219ENST00000497960 TROQ12816 1431 aaPredicted RBP24.68■■□□□ 1.54
NUP50-219ENST00000497960 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
NUP50-219ENST00000497960 RAPGEF3O95398 923 aa24.67■■□□□ 1.54
NUP50-219ENST00000497960 PCF11O94913 1555 aaKnown RBP24.67■■□□□ 1.54
NUP50-219ENST00000497960 FANCAO15360 1455 aa24.66■■□□□ 1.54
NUP50-219ENST00000497960 CCDC18Q5T9S5 1454 aa24.66■■□□□ 1.54
NUP50-219ENST00000497960 AKNAQ7Z591 1439 aa24.65■■□□□ 1.54
NUP50-219ENST00000497960 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.54
NUP50-219ENST00000497960 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
NUP50-219ENST00000497960 PLCH2O75038 1416 aa24.62■■□□□ 1.53
NUP50-219ENST00000497960 DENND4BO75064 1496 aaPredicted RBP24.61■■□□□ 1.53
NUP50-219ENST00000497960 ADGRL1O94910 1474 aa24.61■■□□□ 1.53
NUP50-219ENST00000497960 LRRIQ1Q96JM4 1722 aa24.61■■□□□ 1.53
NUP50-219ENST00000497960 KIF14Q15058 1648 aa24.61■■□□□ 1.53
NUP50-219ENST00000497960 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
NUP50-219ENST00000497960 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
NUP50-219ENST00000497960 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
NUP50-219ENST00000497960 MYO5CQ9NQX4 1742 aa24.53■■□□□ 1.52
NUP50-219ENST00000497960 FRMPD1Q5SYB0 1578 aa24.53■■□□□ 1.52
NUP50-219ENST00000497960 SCAPERQ9BY12 1400 aa24.52■■□□□ 1.52
NUP50-219ENST00000497960 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
NUP50-219ENST00000497960 RICTORQ6R327 1708 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms