RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
MRPL55-234ENST00000497758 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
MRPL55-234ENST00000497758 JPH4Q96JJ6 628 aa19.63■□□□□ 0.73
MRPL55-234ENST00000497758 EEA1Q15075 1411 aa19.61■□□□□ 0.73
MRPL55-234ENST00000497758 PRG4Q92954 1404 aaPredicted RBP19.6■□□□□ 0.73
MRPL55-234ENST00000497758 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
MRPL55-234ENST00000497758 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.73
MRPL55-234ENST00000497758 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
MRPL55-234ENST00000497758 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
MRPL55-234ENST00000497758 IQGAP2Q13576 1575 aa19.53■□□□□ 0.72
MRPL55-234ENST00000497758 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
MRPL55-234ENST00000497758 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
MRPL55-234ENST00000497758 UGGT2Q9NYU1 1516 aa19.41■□□□□ 0.7
MRPL55-234ENST00000497758 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
MRPL55-234ENST00000497758 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
MRPL55-234ENST00000497758 PTPRGP23470 1445 aa19.38■□□□□ 0.69
MRPL55-234ENST00000497758 KIF21BO75037 1637 aa19.37■□□□□ 0.69
MRPL55-234ENST00000497758 DISP1Q96F81 1524 aa19.37■□□□□ 0.69
MRPL55-234ENST00000497758 GOLGA3Q08378 1498 aa19.35■□□□□ 0.69
MRPL55-234ENST00000497758 KIAA0556O60303 1618 aa19.33■□□□□ 0.69
MRPL55-234ENST00000497758 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
MRPL55-234ENST00000497758 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
MRPL55-234ENST00000497758 NPM1P06748 294 aaKnown RBP eCLIP19.31■□□□□ 0.68
MRPL55-234ENST00000497758 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
MRPL55-234ENST00000497758 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
MRPL55-234ENST00000497758 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
MRPL55-234ENST00000497758 UACAQ9BZF9 1416 aa19.24■□□□□ 0.67
MRPL55-234ENST00000497758 P3H3Q8IVL6 736 aa19.23■□□□□ 0.67
MRPL55-234ENST00000497758 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
MRPL55-234ENST00000497758 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
MRPL55-234ENST00000497758 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
MRPL55-234ENST00000497758 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
MRPL55-234ENST00000497758 MAPKBP1O60336 1514 aa19.15■□□□□ 0.66
MRPL55-234ENST00000497758 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
MRPL55-234ENST00000497758 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
MRPL55-234ENST00000497758 ABCA8O94911 1581 aa19.1■□□□□ 0.65
MRPL55-234ENST00000497758 KDM5BQ9UGL1 1544 aa19.1■□□□□ 0.65
MRPL55-234ENST00000497758 FAM69CQ0P6D2 419 aa19.08■□□□□ 0.64
MRPL55-234ENST00000497758 ABCC10Q5T3U5 1492 aa19.08■□□□□ 0.64
MRPL55-234ENST00000497758 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
MRPL55-234ENST00000497758 ZCCHC11Q5TAX3 1644 aaKnown RBP19.06■□□□□ 0.64
MRPL55-234ENST00000497758 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
MRPL55-234ENST00000497758 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
MRPL55-234ENST00000497758 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
MRPL55-234ENST00000497758 DIP2BQ9P265 1576 aa19.02■□□□□ 0.64
MRPL55-234ENST00000497758 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.63
MRPL55-234ENST00000497758 FMN1Q68DA7 1419 aa18.99■□□□□ 0.63
MRPL55-234ENST00000497758 WDR7Q9Y4E6 1490 aa18.98■□□□□ 0.63
MRPL55-234ENST00000497758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
MRPL55-234ENST00000497758 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
MRPL55-234ENST00000497758 ATP10BO94823 1461 aa18.97■□□□□ 0.63
MRPL55-234ENST00000497758 CLIP1P30622 1438 aa18.96■□□□□ 0.63
MRPL55-234ENST00000497758 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
MRPL55-234ENST00000497758 EPRSP07814 1512 aaKnown RBP18.95■□□□□ 0.62
MRPL55-234ENST00000497758 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
MRPL55-234ENST00000497758 GLI2P10070 1586 aa18.93■□□□□ 0.62
MRPL55-234ENST00000497758 KCNH8Q96L42 1107 aa18.92■□□□□ 0.62
MRPL55-234ENST00000497758 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
MRPL55-234ENST00000497758 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
MRPL55-234ENST00000497758 TSPOAP1O95153 1857 aa18.87■□□□□ 0.61
MRPL55-234ENST00000497758 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
MRPL55-234ENST00000497758 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
MRPL55-234ENST00000497758 MAP3K4Q9Y6R4 1608 aa18.83■□□□□ 0.61
MRPL55-234ENST00000497758 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
MRPL55-234ENST00000497758 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
MRPL55-234ENST00000497758 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
MRPL55-234ENST00000497758 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
MRPL55-234ENST00000497758 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
MRPL55-234ENST00000497758 CDK11AQ9UQ88 783 aaPredicted RBP18.8■□□□□ 0.6
MRPL55-234ENST00000497758 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
MRPL55-234ENST00000497758 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
MRPL55-234ENST00000497758 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.59
MRPL55-234ENST00000497758 PPRC1Q5VV67 1664 aaKnown RBP18.76■□□□□ 0.59
MRPL55-234ENST00000497758 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
MRPL55-234ENST00000497758 KDM6BO15054 1643 aa18.74■□□□□ 0.59
MRPL55-234ENST00000497758 ABCA9Q8IUA7 1624 aa18.74■□□□□ 0.59
MRPL55-234ENST00000497758 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
MRPL55-234ENST00000497758 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
MRPL55-234ENST00000497758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
MRPL55-234ENST00000497758 KIF14Q15058 1648 aa18.66■□□□□ 0.58
MRPL55-234ENST00000497758 TTC37Q6PGP7 1564 aa18.65■□□□□ 0.58
MRPL55-234ENST00000497758 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
MRPL55-234ENST00000497758 PHLDB1Q86UU1 1377 aa18.64■□□□□ 0.57
MRPL55-234ENST00000497758 VPS8Q8N3P4 1428 aa18.63■□□□□ 0.57
MRPL55-234ENST00000497758 NEO1Q92859 1461 aa18.63■□□□□ 0.57
MRPL55-234ENST00000497758 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
MRPL55-234ENST00000497758 FANCAO15360 1455 aa18.6■□□□□ 0.57
MRPL55-234ENST00000497758 MTUS2Q5JR59 1369 aa18.59■□□□□ 0.57
MRPL55-234ENST00000497758 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
MRPL55-234ENST00000497758 PLCH2O75038 1416 aa18.58■□□□□ 0.57
MRPL55-234ENST00000497758 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.56
MRPL55-234ENST00000497758 AKNAQ7Z591 1439 aa18.56■□□□□ 0.56
MRPL55-234ENST00000497758 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
MRPL55-234ENST00000497758 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
MRPL55-234ENST00000497758 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
MRPL55-234ENST00000497758 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
MRPL55-234ENST00000497758 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.56
MRPL55-234ENST00000497758 DENND4BO75064 1496 aaPredicted RBP18.51■□□□□ 0.55
MRPL55-234ENST00000497758 ADGRL1O94910 1474 aa18.5■□□□□ 0.55
MRPL55-234ENST00000497758 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms