RNA–Protein interactions for RNA: ENST00000497611.1

CDC7-205, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-205ENST00000497611 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
CDC7-205ENST00000497611 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
CDC7-205ENST00000497611 CUL7Q14999 1698 aa23.9■■□□□ 1.42
CDC7-205ENST00000497611 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
CDC7-205ENST00000497611 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
CDC7-205ENST00000497611 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
CDC7-205ENST00000497611 RAPGEF2Q9Y4G8 1499 aa23.69■■□□□ 1.38
CDC7-205ENST00000497611 PTPRGP23470 1445 aa23.68■■□□□ 1.38
CDC7-205ENST00000497611 ADCY10Q96PN6 1610 aa23.67■■□□□ 1.38
CDC7-205ENST00000497611 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
CDC7-205ENST00000497611 CARMIL2Q6F5E8 1435 aa23.65■■□□□ 1.38
CDC7-205ENST00000497611 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
CDC7-205ENST00000497611 TNIKQ9UKE5 1360 aa23.64■■□□□ 1.37
CDC7-205ENST00000497611 KIF13AQ9H1H9 1805 aa23.59■■□□□ 1.37
CDC7-205ENST00000497611 ABCC10Q5T3U5 1492 aa23.59■■□□□ 1.37
CDC7-205ENST00000497611 DISP1Q96F81 1524 aa23.59■■□□□ 1.37
CDC7-205ENST00000497611 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
CDC7-205ENST00000497611 UGGT2Q9NYU1 1516 aa23.53■■□□□ 1.36
CDC7-205ENST00000497611 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
CDC7-205ENST00000497611 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
CDC7-205ENST00000497611 UACAQ9BZF9 1416 aa23.49■■□□□ 1.35
CDC7-205ENST00000497611 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
CDC7-205ENST00000497611 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
CDC7-205ENST00000497611 UHRF1BP1LA0JNW5 1464 aa23.44■■□□□ 1.34
CDC7-205ENST00000497611 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
CDC7-205ENST00000497611 ASXL2Q76L83 1435 aa23.42■■□□□ 1.34
CDC7-205ENST00000497611 CTTNBP2Q8WZ74 1663 aa23.39■■□□□ 1.34
CDC7-205ENST00000497611 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
CDC7-205ENST00000497611 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
CDC7-205ENST00000497611 KDM5BQ9UGL1 1544 aa23.35■■□□□ 1.33
CDC7-205ENST00000497611 FAM9AQ8IZU1 332 aaPredicted RBP23.34■■□□□ 1.33
CDC7-205ENST00000497611 TSPOAP1O95153 1857 aa23.34■■□□□ 1.33
CDC7-205ENST00000497611 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
CDC7-205ENST00000497611 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
CDC7-205ENST00000497611 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
CDC7-205ENST00000497611 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
CDC7-205ENST00000497611 GLI2P10070 1586 aa23.27■■□□□ 1.32
CDC7-205ENST00000497611 KDM6BO15054 1643 aa23.25■■□□□ 1.31
CDC7-205ENST00000497611 EEA1Q15075 1411 aa23.24■■□□□ 1.31
CDC7-205ENST00000497611 ABCA8O94911 1581 aa23.23■■□□□ 1.31
CDC7-205ENST00000497611 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
CDC7-205ENST00000497611 ARID3CA6NKF2 412 aa23.21■■□□□ 1.31
CDC7-205ENST00000497611 PPRC1Q5VV67 1664 aaKnown RBP23.19■■□□□ 1.3
CDC7-205ENST00000497611 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
CDC7-205ENST00000497611 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
CDC7-205ENST00000497611 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
CDC7-205ENST00000497611 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
CDC7-205ENST00000497611 MAP3K4Q9Y6R4 1608 aa23.14■■□□□ 1.29
CDC7-205ENST00000497611 COL17A1Q9UMD9 1497 aaPredicted RBP23.13■■□□□ 1.29
CDC7-205ENST00000497611 SAMD9Q5K651 1589 aa23.11■■□□□ 1.29
CDC7-205ENST00000497611 ATP10BO94823 1461 aa23.11■■□□□ 1.29
CDC7-205ENST00000497611 KDM4FA0A1W2PPD8 638 aa23.08■■□□□ 1.29
CDC7-205ENST00000497611 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
CDC7-205ENST00000497611 CD109Q6YHK3 1445 aa23.07■■□□□ 1.28
CDC7-205ENST00000497611 TEX14Q8IWB6 1497 aa23.06■■□□□ 1.28
CDC7-205ENST00000497611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
CDC7-205ENST00000497611 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
CDC7-205ENST00000497611 KIF21BO75037 1637 aa23.03■■□□□ 1.28
CDC7-205ENST00000497611 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
CDC7-205ENST00000497611 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
CDC7-205ENST00000497611 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
CDC7-205ENST00000497611 NUP153P49790 1475 aaKnown RBP22.97■■□□□ 1.27
CDC7-205ENST00000497611 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
CDC7-205ENST00000497611 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
CDC7-205ENST00000497611 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
CDC7-205ENST00000497611 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
CDC7-205ENST00000497611 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
CDC7-205ENST00000497611 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
CDC7-205ENST00000497611 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
CDC7-205ENST00000497611 ARAP3Q8WWN8 1544 aa22.81■■□□□ 1.24
CDC7-205ENST00000497611 RAPGEF3O95398 923 aa22.8■■□□□ 1.24
CDC7-205ENST00000497611 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
CDC7-205ENST00000497611 PHLDB1Q86UU1 1377 aa22.76■■□□□ 1.23
CDC7-205ENST00000497611 NEO1Q92859 1461 aa22.74■■□□□ 1.23
CDC7-205ENST00000497611 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
CDC7-205ENST00000497611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.23
CDC7-205ENST00000497611 AKNAQ7Z591 1439 aa22.66■■□□□ 1.22
CDC7-205ENST00000497611 TTC37Q6PGP7 1564 aa22.66■■□□□ 1.22
CDC7-205ENST00000497611 HECW1Q76N89 1606 aa22.65■■□□□ 1.22
CDC7-205ENST00000497611 FANCAO15360 1455 aa22.65■■□□□ 1.22
CDC7-205ENST00000497611 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
CDC7-205ENST00000497611 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
CDC7-205ENST00000497611 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
CDC7-205ENST00000497611 PLCH2O75038 1416 aa22.59■■□□□ 1.21
CDC7-205ENST00000497611 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
CDC7-205ENST00000497611 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
CDC7-205ENST00000497611 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
CDC7-205ENST00000497611 LRRIQ1Q96JM4 1722 aa22.54■■□□□ 1.2
CDC7-205ENST00000497611 KIF14Q15058 1648 aa22.53■■□□□ 1.2
CDC7-205ENST00000497611 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
CDC7-205ENST00000497611 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
CDC7-205ENST00000497611 CFAP74Q9C0B2 1584 aa22.53■■□□□ 1.2
CDC7-205ENST00000497611 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
CDC7-205ENST00000497611 CLIP1P30622 1438 aa22.52■■□□□ 1.2
CDC7-205ENST00000497611 PCF11O94913 1555 aaKnown RBP22.51■■□□□ 1.19
CDC7-205ENST00000497611 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
CDC7-205ENST00000497611 ARHGEF40Q8TER5 1519 aa22.47■■□□□ 1.19
CDC7-205ENST00000497611 ADAMTSL3P82987 1691 aa22.46■■□□□ 1.19
CDC7-205ENST00000497611 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
CDC7-205ENST00000497611 HECW2Q9P2P5 1572 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms