RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 DIP2BQ9P265 1576 aa17.48■□□□□ 0.39
SCNM1-206ENST00000497147 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
SCNM1-206ENST00000497147 KDM6BO15054 1643 aa17.44■□□□□ 0.38
SCNM1-206ENST00000497147 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
SCNM1-206ENST00000497147 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
SCNM1-206ENST00000497147 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
SCNM1-206ENST00000497147 ADCY10Q96PN6 1610 aa17.4■□□□□ 0.38
SCNM1-206ENST00000497147 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
SCNM1-206ENST00000497147 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
SCNM1-206ENST00000497147 TSPOAP1O95153 1857 aa17.33■□□□□ 0.37
SCNM1-206ENST00000497147 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
SCNM1-206ENST00000497147 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
SCNM1-206ENST00000497147 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
SCNM1-206ENST00000497147 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
SCNM1-206ENST00000497147 COL17A1Q9UMD9 1497 aaPredicted RBP17.21■□□□□ 0.35
SCNM1-206ENST00000497147 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
SCNM1-206ENST00000497147 PTPRGP23470 1445 aa17.18■□□□□ 0.34
SCNM1-206ENST00000497147 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
SCNM1-206ENST00000497147 ABCC2Q92887 1545 aa17.16■□□□□ 0.34
SCNM1-206ENST00000497147 GLI2P10070 1586 aa17.15■□□□□ 0.34
SCNM1-206ENST00000497147 TTBK1Q5TCY1 1321 aaPredicted RBP17.15■□□□□ 0.34
SCNM1-206ENST00000497147 PLB1Q6P1J6 1458 aa17.13■□□□□ 0.33
SCNM1-206ENST00000497147 IGF1RP08069 1367 aa17.13■□□□□ 0.33
SCNM1-206ENST00000497147 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
SCNM1-206ENST00000497147 FBXO41Q8TF61 875 aa17.06■□□□□ 0.32
SCNM1-206ENST00000497147 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
SCNM1-206ENST00000497147 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
SCNM1-206ENST00000497147 MAP3K4Q9Y6R4 1608 aa17.04■□□□□ 0.32
SCNM1-206ENST00000497147 CUL7Q14999 1698 aa17.04■□□□□ 0.32
SCNM1-206ENST00000497147 CARMIL2Q6F5E8 1435 aa17.03■□□□□ 0.32
SCNM1-206ENST00000497147 UACAQ9BZF9 1416 aa17.02■□□□□ 0.31
SCNM1-206ENST00000497147 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
SCNM1-206ENST00000497147 KDM5BQ9UGL1 1544 aa16.99■□□□□ 0.31
SCNM1-206ENST00000497147 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
SCNM1-206ENST00000497147 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
SCNM1-206ENST00000497147 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
SCNM1-206ENST00000497147 IQGAP2Q13576 1575 aa16.94■□□□□ 0.3
SCNM1-206ENST00000497147 ZCCHC11Q5TAX3 1644 aaKnown RBP16.92■□□□□ 0.3
SCNM1-206ENST00000497147 WDR7Q9Y4E6 1490 aa16.89■□□□□ 0.29
SCNM1-206ENST00000497147 CD109Q6YHK3 1445 aa16.86■□□□□ 0.29
SCNM1-206ENST00000497147 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
SCNM1-206ENST00000497147 KIF21BO75037 1637 aa16.85■□□□□ 0.29
SCNM1-206ENST00000497147 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
SCNM1-206ENST00000497147 KCNH8Q96L42 1107 aa16.82■□□□□ 0.28
SCNM1-206ENST00000497147 PTPRMP28827 1452 aa16.81■□□□□ 0.28
SCNM1-206ENST00000497147 KIAA0556O60303 1618 aa16.8■□□□□ 0.28
SCNM1-206ENST00000497147 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
SCNM1-206ENST00000497147 LMTK3Q96Q04 1460 aa16.77■□□□□ 0.28
SCNM1-206ENST00000497147 ARAP3Q8WWN8 1544 aa16.75■□□□□ 0.27
SCNM1-206ENST00000497147 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
SCNM1-206ENST00000497147 PCF11O94913 1555 aaKnown RBP16.72■□□□□ 0.27
SCNM1-206ENST00000497147 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
SCNM1-206ENST00000497147 ABCA8O94911 1581 aa16.7■□□□□ 0.26
SCNM1-206ENST00000497147 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
SCNM1-206ENST00000497147 ILDR2Q71H61 639 aa16.68■□□□□ 0.26
SCNM1-206ENST00000497147 HSPA2P54652 639 aa16.65■□□□□ 0.26
SCNM1-206ENST00000497147 MADDQ8WXG6 1647 aa16.65■□□□□ 0.26
SCNM1-206ENST00000497147 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
SCNM1-206ENST00000497147 CERKQ8TCT0 537 aa16.63■□□□□ 0.25
SCNM1-206ENST00000497147 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
SCNM1-206ENST00000497147 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
SCNM1-206ENST00000497147 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
SCNM1-206ENST00000497147 SOCS7O14512 581 aa16.61■□□□□ 0.25
SCNM1-206ENST00000497147 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
SCNM1-206ENST00000497147 FRMPD1Q5SYB0 1578 aa16.6■□□□□ 0.25
SCNM1-206ENST00000497147 ATP10BO94823 1461 aa16.59■□□□□ 0.25
SCNM1-206ENST00000497147 DISP3Q9P2K9 1392 aa16.58■□□□□ 0.24
SCNM1-206ENST00000497147 ABCA9Q8IUA7 1624 aa16.58■□□□□ 0.24
SCNM1-206ENST00000497147 NEO1Q92859 1461 aa16.56■□□□□ 0.24
SCNM1-206ENST00000497147 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
SCNM1-206ENST00000497147 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
SCNM1-206ENST00000497147 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
SCNM1-206ENST00000497147 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
SCNM1-206ENST00000497147 ARHGEF40Q8TER5 1519 aa16.5■□□□□ 0.23
SCNM1-206ENST00000497147 SIGLEC1Q9BZZ2 1709 aa16.46■□□□□ 0.23
SCNM1-206ENST00000497147 DENND4BO75064 1496 aaPredicted RBP16.44■□□□□ 0.22
SCNM1-206ENST00000497147 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
SCNM1-206ENST00000497147 RICTORQ6R327 1708 aa16.43■□□□□ 0.22
SCNM1-206ENST00000497147 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
SCNM1-206ENST00000497147 POGZQ7Z3K3 1410 aa16.42■□□□□ 0.22
SCNM1-206ENST00000497147 YEATS2Q9ULM3 1422 aa16.42■□□□□ 0.22
SCNM1-206ENST00000497147 FANCAO15360 1455 aa16.42■□□□□ 0.22
SCNM1-206ENST00000497147 MLECQ14165 292 aa16.41■□□□□ 0.22
SCNM1-206ENST00000497147 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
SCNM1-206ENST00000497147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
SCNM1-206ENST00000497147 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
SCNM1-206ENST00000497147 FAM9AQ8IZU1 332 aaPredicted RBP16.4■□□□□ 0.22
SCNM1-206ENST00000497147 ZMYM4Q5VZL5 1548 aa16.38■□□□□ 0.21
SCNM1-206ENST00000497147 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
SCNM1-206ENST00000497147 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
SCNM1-206ENST00000497147 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
SCNM1-206ENST00000497147 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
SCNM1-206ENST00000497147 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
SCNM1-206ENST00000497147 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
SCNM1-206ENST00000497147 CEBPAP49715 358 aaPredicted RBP16.36■□□□□ 0.21
SCNM1-206ENST00000497147 FER1L4A9Z1Z3 1794 aa16.34■□□□□ 0.21
SCNM1-206ENST00000497147 STRCQ7RTU9 1775 aa16.34■□□□□ 0.21
SCNM1-206ENST00000497147 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
SCNM1-206ENST00000497147 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
SCNM1-206ENST00000497147 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms