RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
ABCB1-209ENST00000496821 CUL7Q14999 1698 aa28.28■■■□□ 2.12
ABCB1-209ENST00000496821 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
ABCB1-209ENST00000496821 KIF13AQ9H1H9 1805 aa28.19■■■□□ 2.1
ABCB1-209ENST00000496821 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.1
ABCB1-209ENST00000496821 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
ABCB1-209ENST00000496821 MAPKBP1O60336 1514 aa28.13■■■□□ 2.09
ABCB1-209ENST00000496821 ABCC10Q5T3U5 1492 aa28.09■■■□□ 2.09
ABCB1-209ENST00000496821 NPM1P06748 294 aaKnown RBP eCLIP28.03■■■□□ 2.08
ABCB1-209ENST00000496821 DIP2BQ9P265 1576 aa28.02■■■□□ 2.08
ABCB1-209ENST00000496821 FAM69CQ0P6D2 419 aa28■■■□□ 2.07
ABCB1-209ENST00000496821 PTPRGP23470 1445 aa27.98■■■□□ 2.07
ABCB1-209ENST00000496821 IQGAP2Q13576 1575 aa27.98■■■□□ 2.07
ABCB1-209ENST00000496821 AEBP2Q6ZN18 517 aaPredicted RBP27.94■■■□□ 2.06
ABCB1-209ENST00000496821 CARMIL2Q6F5E8 1435 aa27.93■■■□□ 2.06
ABCB1-209ENST00000496821 TNIKQ9UKE5 1360 aa27.93■■■□□ 2.06
ABCB1-209ENST00000496821 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.05
ABCB1-209ENST00000496821 DISP1Q96F81 1524 aa27.88■■■□□ 2.05
ABCB1-209ENST00000496821 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
ABCB1-209ENST00000496821 UHRF1BP1LA0JNW5 1464 aa27.83■■■□□ 2.05
ABCB1-209ENST00000496821 UGGT2Q9NYU1 1516 aa27.83■■■□□ 2.05
ABCB1-209ENST00000496821 TTBK1Q5TCY1 1321 aaPredicted RBP27.82■■■□□ 2.04
ABCB1-209ENST00000496821 UACAQ9BZF9 1416 aa27.77■■■□□ 2.04
ABCB1-209ENST00000496821 ASXL2Q76L83 1435 aa27.76■■■□□ 2.04
ABCB1-209ENST00000496821 PLB1Q6P1J6 1458 aa27.74■■■□□ 2.03
ABCB1-209ENST00000496821 KDM6BO15054 1643 aa27.74■■■□□ 2.03
ABCB1-209ENST00000496821 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
ABCB1-209ENST00000496821 TSPOAP1O95153 1857 aa27.73■■■□□ 2.03
ABCB1-209ENST00000496821 GLI2P10070 1586 aa27.71■■■□□ 2.03
ABCB1-209ENST00000496821 KDM5BQ9UGL1 1544 aa27.71■■■□□ 2.03
ABCB1-209ENST00000496821 PPRC1Q5VV67 1664 aaKnown RBP27.65■■■□□ 2.02
ABCB1-209ENST00000496821 CTTNBP2Q8WZ74 1663 aa27.64■■■□□ 2.02
ABCB1-209ENST00000496821 PRXQ9BXM0 1461 aa27.64■■■□□ 2.01
ABCB1-209ENST00000496821 ZCCHC11Q5TAX3 1644 aaKnown RBP27.61■■■□□ 2.01
ABCB1-209ENST00000496821 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
ABCB1-209ENST00000496821 MAP3K4Q9Y6R4 1608 aa27.56■■■□□ 2
ABCB1-209ENST00000496821 GOLGA3Q08378 1498 aa27.54■■■□□ 2
ABCB1-209ENST00000496821 KDM4FA0A1W2PPD8 638 aa27.51■■□□□ 1.99
ABCB1-209ENST00000496821 ABCA8O94911 1581 aa27.5■■□□□ 1.99
ABCB1-209ENST00000496821 WDR7Q9Y4E6 1490 aa27.5■■□□□ 1.99
ABCB1-209ENST00000496821 COL17A1Q9UMD9 1497 aaPredicted RBP27.48■■□□□ 1.99
ABCB1-209ENST00000496821 TEX14Q8IWB6 1497 aa27.44■■□□□ 1.98
ABCB1-209ENST00000496821 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
ABCB1-209ENST00000496821 MAGI3Q5TCQ9 1506 aa27.32■■□□□ 1.96
ABCB1-209ENST00000496821 CFAP43Q8NDM7 1665 aa27.31■■□□□ 1.96
ABCB1-209ENST00000496821 CD109Q6YHK3 1445 aa27.3■■□□□ 1.96
ABCB1-209ENST00000496821 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
ABCB1-209ENST00000496821 ADGRL1O94910 1474 aa27.28■■□□□ 1.96
ABCB1-209ENST00000496821 P3H3Q8IVL6 736 aa27.26■■□□□ 1.95
ABCB1-209ENST00000496821 ATP10BO94823 1461 aa27.25■■□□□ 1.95
ABCB1-209ENST00000496821 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
ABCB1-209ENST00000496821 EEA1Q15075 1411 aa27.24■■□□□ 1.95
ABCB1-209ENST00000496821 ARID3CA6NKF2 412 aa27.18■■□□□ 1.94
ABCB1-209ENST00000496821 RAPGEF6Q8TEU7 1601 aa27.16■■□□□ 1.94
ABCB1-209ENST00000496821 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
ABCB1-209ENST00000496821 ABCA9Q8IUA7 1624 aa27.13■■□□□ 1.93
ABCB1-209ENST00000496821 ARAP3Q8WWN8 1544 aa27.11■■□□□ 1.93
ABCB1-209ENST00000496821 NUP153P49790 1475 aaKnown RBP27.11■■□□□ 1.93
ABCB1-209ENST00000496821 FHOD3Q2V2M9 1422 aa27.08■■□□□ 1.93
ABCB1-209ENST00000496821 KIF21BO75037 1637 aa27.05■■□□□ 1.92
ABCB1-209ENST00000496821 PHLDB1Q86UU1 1377 aa27.02■■□□□ 1.92
ABCB1-209ENST00000496821 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
ABCB1-209ENST00000496821 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
ABCB1-209ENST00000496821 NEO1Q92859 1461 aa26.99■■□□□ 1.91
ABCB1-209ENST00000496821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.95■■□□□ 1.9
ABCB1-209ENST00000496821 HNRNPUL2Q1KMD3 747 aaKnown RBP26.95■■□□□ 1.9
ABCB1-209ENST00000496821 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
ABCB1-209ENST00000496821 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
ABCB1-209ENST00000496821 RAPGEF3O95398 923 aa26.9■■□□□ 1.9
ABCB1-209ENST00000496821 PLEKHD1A6NEE1 506 aa26.86■■□□□ 1.89
ABCB1-209ENST00000496821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.85■■□□□ 1.89
ABCB1-209ENST00000496821 CDK13Q14004 1512 aaKnown RBP26.81■■□□□ 1.88
ABCB1-209ENST00000496821 TTC37Q6PGP7 1564 aa26.81■■□□□ 1.88
ABCB1-209ENST00000496821 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
ABCB1-209ENST00000496821 ADAMTSL3P82987 1691 aa26.81■■□□□ 1.88
ABCB1-209ENST00000496821 FANCAO15360 1455 aa26.79■■□□□ 1.88
ABCB1-209ENST00000496821 AKNAQ7Z591 1439 aa26.78■■□□□ 1.88
ABCB1-209ENST00000496821 RICTORQ6R327 1708 aa26.77■■□□□ 1.88
ABCB1-209ENST00000496821 DENND4BO75064 1496 aaPredicted RBP26.77■■□□□ 1.88
ABCB1-209ENST00000496821 ARHGAP35Q9NRY4 1499 aa26.77■■□□□ 1.88
ABCB1-209ENST00000496821 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.87
ABCB1-209ENST00000496821 ARHGEF40Q8TER5 1519 aa26.75■■□□□ 1.87
ABCB1-209ENST00000496821 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
ABCB1-209ENST00000496821 FMN1Q68DA7 1419 aa26.73■■□□□ 1.87
ABCB1-209ENST00000496821 PTPRMP28827 1452 aa26.73■■□□□ 1.87
ABCB1-209ENST00000496821 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
ABCB1-209ENST00000496821 BCORL1Q5H9F3 1711 aa26.72■■□□□ 1.87
ABCB1-209ENST00000496821 ZMYM4Q5VZL5 1548 aa26.7■■□□□ 1.87
ABCB1-209ENST00000496821 HECW1Q76N89 1606 aa26.7■■□□□ 1.86
ABCB1-209ENST00000496821 PLCH2O75038 1416 aa26.67■■□□□ 1.86
ABCB1-209ENST00000496821 MADDQ8WXG6 1647 aa26.66■■□□□ 1.86
ABCB1-209ENST00000496821 ILDR1Q86SU0 546 aaPredicted RBP26.66■■□□□ 1.86
ABCB1-209ENST00000496821 ARID4BQ4LE39 1312 aaPredicted RBP26.63■■□□□ 1.85
ABCB1-209ENST00000496821 YEATS2Q9ULM3 1422 aa26.62■■□□□ 1.85
ABCB1-209ENST00000496821 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
ABCB1-209ENST00000496821 POGZQ7Z3K3 1410 aa26.6■■□□□ 1.85
ABCB1-209ENST00000496821 MAGI2Q86UL8 1455 aa26.6■■□□□ 1.85
ABCB1-209ENST00000496821 SIGLEC1Q9BZZ2 1709 aa26.59■■□□□ 1.85
ABCB1-209ENST00000496821 KIF14Q15058 1648 aa26.59■■□□□ 1.85
ABCB1-209ENST00000496821 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms