RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
MACF1-224ENST00000496804 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
MACF1-224ENST00000496804 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
MACF1-224ENST00000496804 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
MACF1-224ENST00000496804 TNNT2P45379 298 aaPredicted RBP11.69□□□□□ -0.54
MACF1-224ENST00000496804 CLIP1P30622 1438 aa11.69□□□□□ -0.54
MACF1-224ENST00000496804 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
MACF1-224ENST00000496804 BECN1Q14457 450 aa11.68□□□□□ -0.54
MACF1-224ENST00000496804 L1TD1Q5T7N2 865 aaKnown RBP11.66□□□□□ -0.54
MACF1-224ENST00000496804 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
MACF1-224ENST00000496804 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
MACF1-224ENST00000496804 HSP90AA2PQ14568 343 aaPredicted RBP11.65□□□□□ -0.54
MACF1-224ENST00000496804 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
MACF1-224ENST00000496804 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
MACF1-224ENST00000496804 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
MACF1-224ENST00000496804 MSH5O43196 834 aa11.62□□□□□ -0.55
MACF1-224ENST00000496804 GSE1Q14687 1217 aa11.62□□□□□ -0.55
MACF1-224ENST00000496804 UBE2Q2Q8WVN8 375 aa11.61□□□□□ -0.55
MACF1-224ENST00000496804 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
MACF1-224ENST00000496804 SIN3AQ96ST3 1273 aa11.6□□□□□ -0.55
MACF1-224ENST00000496804 EEA1Q15075 1411 aa11.6□□□□□ -0.55
MACF1-224ENST00000496804 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
MACF1-224ENST00000496804 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
MACF1-224ENST00000496804 TCERG1O14776 1098 aaKnown RBP11.58□□□□□ -0.56
MACF1-224ENST00000496804 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
MACF1-224ENST00000496804 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
MACF1-224ENST00000496804 PODXL2Q9NZ53 605 aa11.54□□□□□ -0.56
MACF1-224ENST00000496804 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.57
MACF1-224ENST00000496804 CDK11BP21127 795 aaKnown RBP11.52□□□□□ -0.57
MACF1-224ENST00000496804 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
MACF1-224ENST00000496804 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
MACF1-224ENST00000496804 RGS3P49796 1198 aa11.5□□□□□ -0.57
MACF1-224ENST00000496804 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
MACF1-224ENST00000496804 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
MACF1-224ENST00000496804 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
MACF1-224ENST00000496804 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
MACF1-224ENST00000496804 MSNP26038 577 aaKnown RBP11.46□□□□□ -0.57
MACF1-224ENST00000496804 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
MACF1-224ENST00000496804 GOLGA6L3A6NEY3 463 aa11.46□□□□□ -0.57
MACF1-224ENST00000496804 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.57
MACF1-224ENST00000496804 PDE4AP27815 886 aa11.46□□□□□ -0.58
MACF1-224ENST00000496804 CCNB3Q8WWL7 1395 aa11.46□□□□□ -0.58
MACF1-224ENST00000496804 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
MACF1-224ENST00000496804 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
MACF1-224ENST00000496804 SCRIBQ14160 1630 aa11.43□□□□□ -0.58
MACF1-224ENST00000496804 A0A0U1RQG5 324 aaPredicted RBP11.43□□□□□ -0.58
MACF1-224ENST00000496804 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
MACF1-224ENST00000496804 VPS8Q8N3P4 1428 aa11.43□□□□□ -0.58
MACF1-224ENST00000496804 PTMAP06454 111 aaKnown RBP11.43□□□□□ -0.58
MACF1-224ENST00000496804 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
MACF1-224ENST00000496804 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
MACF1-224ENST00000496804 SLKQ9H2G2 1235 aaPredicted RBP11.41□□□□□ -0.58
MACF1-224ENST00000496804 ARID3AQ99856 593 aa11.41□□□□□ -0.58
MACF1-224ENST00000496804 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
MACF1-224ENST00000496804 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
MACF1-224ENST00000496804 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
MACF1-224ENST00000496804 NFKBIBQ15653 356 aa11.4□□□□□ -0.58
MACF1-224ENST00000496804 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
MACF1-224ENST00000496804 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
MACF1-224ENST00000496804 SOGA1O94964 1423 aa11.39□□□□□ -0.59
MACF1-224ENST00000496804 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
MACF1-224ENST00000496804 CHIC2Q9UKJ5 165 aa11.38□□□□□ -0.59
MACF1-224ENST00000496804 SETD5Q9C0A6 1442 aa11.38□□□□□ -0.59
MACF1-224ENST00000496804 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
MACF1-224ENST00000496804 RAB3GAP2Q9H2M9 1393 aa11.38□□□□□ -0.59
MACF1-224ENST00000496804 ZBED9Q6R2W3 1325 aa11.37□□□□□ -0.59
MACF1-224ENST00000496804 MS4A1P11836 297 aa11.36□□□□□ -0.59
MACF1-224ENST00000496804 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
MACF1-224ENST00000496804 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
MACF1-224ENST00000496804 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
MACF1-224ENST00000496804 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
MACF1-224ENST00000496804 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
MACF1-224ENST00000496804 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
MACF1-224ENST00000496804 BAZ1BQ9UIG0 1483 aaKnown RBP11.31□□□□□ -0.6
MACF1-224ENST00000496804 RRP7BPQ9NSQ0 103 aa11.31□□□□□ -0.6
MACF1-224ENST00000496804 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
MACF1-224ENST00000496804 EXOC6Q8TAG9 804 aa11.3□□□□□ -0.6
MACF1-224ENST00000496804 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
MACF1-224ENST00000496804 GBP4Q96PP9 640 aa11.28□□□□□ -0.6
MACF1-224ENST00000496804 ABCC9O60706 1549 aa11.28□□□□□ -0.6
MACF1-224ENST00000496804 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
MACF1-224ENST00000496804 PTMSP20962 102 aa11.27□□□□□ -0.61
MACF1-224ENST00000496804 CHAF1AQ13111 956 aaPredicted RBP11.27□□□□□ -0.61
MACF1-224ENST00000496804 PRKRIP1Q9H875 184 aaPredicted RBP11.27□□□□□ -0.61
MACF1-224ENST00000496804 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
MACF1-224ENST00000496804 CCDC88BA6NC98 1476 aa11.27□□□□□ -0.61
MACF1-224ENST00000496804 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
MACF1-224ENST00000496804 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
MACF1-224ENST00000496804 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
MACF1-224ENST00000496804 TPM2P07951 284 aa11.25□□□□□ -0.61
MACF1-224ENST00000496804 MAP7D2Q96T17 732 aa11.23□□□□□ -0.61
MACF1-224ENST00000496804 ARID3CA6NKF2 412 aa11.23□□□□□ -0.61
MACF1-224ENST00000496804 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
MACF1-224ENST00000496804 ZBTB7CA1YPR0 619 aa11.22□□□□□ -0.61
MACF1-224ENST00000496804 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
MACF1-224ENST00000496804 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
MACF1-224ENST00000496804 CARD11Q9BXL7 1154 aa11.21□□□□□ -0.61
MACF1-224ENST00000496804 PLCB2Q00722 1185 aa11.21□□□□□ -0.61
MACF1-224ENST00000496804 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.21□□□□□ -0.61
MACF1-224ENST00000496804 BACH2Q9BYV9 841 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms