RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
U2AF1-212ENST00000496462 IGF1RP08069 1367 aa13.58□□□□□ -0.24
U2AF1-212ENST00000496462 RAPGEF2Q9Y4G8 1499 aa13.58□□□□□ -0.24
U2AF1-212ENST00000496462 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
U2AF1-212ENST00000496462 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
U2AF1-212ENST00000496462 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
U2AF1-212ENST00000496462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
U2AF1-212ENST00000496462 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
U2AF1-212ENST00000496462 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
U2AF1-212ENST00000496462 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
U2AF1-212ENST00000496462 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
U2AF1-212ENST00000496462 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
U2AF1-212ENST00000496462 PRG4Q92954 1404 aaPredicted RBP13.48□□□□□ -0.25
U2AF1-212ENST00000496462 CUL7Q14999 1698 aa13.48□□□□□ -0.25
U2AF1-212ENST00000496462 NUP160Q12769 1436 aa13.47□□□□□ -0.25
U2AF1-212ENST00000496462 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
U2AF1-212ENST00000496462 RUSC2Q8N2Y8 1516 aa13.46□□□□□ -0.25
U2AF1-212ENST00000496462 CEP170Q5SW79 1584 aa13.46□□□□□ -0.25
U2AF1-212ENST00000496462 P3H3Q8IVL6 736 aa13.44□□□□□ -0.26
U2AF1-212ENST00000496462 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
U2AF1-212ENST00000496462 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
U2AF1-212ENST00000496462 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
U2AF1-212ENST00000496462 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
U2AF1-212ENST00000496462 PRXQ9BXM0 1461 aa13.37□□□□□ -0.27
U2AF1-212ENST00000496462 PTPRGP23470 1445 aa13.36□□□□□ -0.27
U2AF1-212ENST00000496462 CLIP1P30622 1438 aa13.35□□□□□ -0.27
U2AF1-212ENST00000496462 ARID3CA6NKF2 412 aa13.33□□□□□ -0.27
U2AF1-212ENST00000496462 KIF21BO75037 1637 aa13.31□□□□□ -0.28
U2AF1-212ENST00000496462 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
U2AF1-212ENST00000496462 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
U2AF1-212ENST00000496462 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
U2AF1-212ENST00000496462 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
U2AF1-212ENST00000496462 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
U2AF1-212ENST00000496462 CEP162Q5TB80 1403 aa13.24□□□□□ -0.29
U2AF1-212ENST00000496462 EFCAB5A4FU69 1503 aa13.22□□□□□ -0.29
U2AF1-212ENST00000496462 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
U2AF1-212ENST00000496462 MYT1LQ9UL68 1186 aa13.22□□□□□ -0.29
U2AF1-212ENST00000496462 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
U2AF1-212ENST00000496462 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
U2AF1-212ENST00000496462 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
U2AF1-212ENST00000496462 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
U2AF1-212ENST00000496462 UGGT2Q9NYU1 1516 aa13.15□□□□□ -0.3
U2AF1-212ENST00000496462 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
U2AF1-212ENST00000496462 ADCY10Q96PN6 1610 aa13.11□□□□□ -0.31
U2AF1-212ENST00000496462 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
U2AF1-212ENST00000496462 ASXL2Q76L83 1435 aa13.1□□□□□ -0.31
U2AF1-212ENST00000496462 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
U2AF1-212ENST00000496462 CTTNBP2Q8WZ74 1663 aa13.09□□□□□ -0.31
U2AF1-212ENST00000496462 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
U2AF1-212ENST00000496462 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
U2AF1-212ENST00000496462 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
U2AF1-212ENST00000496462 CCDC18Q5T9S5 1454 aa13.06□□□□□ -0.32
U2AF1-212ENST00000496462 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
U2AF1-212ENST00000496462 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
U2AF1-212ENST00000496462 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
U2AF1-212ENST00000496462 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
U2AF1-212ENST00000496462 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
U2AF1-212ENST00000496462 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.33
U2AF1-212ENST00000496462 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
U2AF1-212ENST00000496462 TSPOAP1O95153 1857 aa13.01□□□□□ -0.33
U2AF1-212ENST00000496462 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
U2AF1-212ENST00000496462 HECW1Q76N89 1606 aa13□□□□□ -0.33
U2AF1-212ENST00000496462 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
U2AF1-212ENST00000496462 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
U2AF1-212ENST00000496462 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
U2AF1-212ENST00000496462 DIP2BQ9P265 1576 aa12.99□□□□□ -0.33
U2AF1-212ENST00000496462 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
U2AF1-212ENST00000496462 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
U2AF1-212ENST00000496462 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
U2AF1-212ENST00000496462 CD109Q6YHK3 1445 aa12.96□□□□□ -0.34
U2AF1-212ENST00000496462 EPRSP07814 1512 aaKnown RBP12.96□□□□□ -0.34
U2AF1-212ENST00000496462 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
U2AF1-212ENST00000496462 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
U2AF1-212ENST00000496462 ATP10BO94823 1461 aa12.95□□□□□ -0.34
U2AF1-212ENST00000496462 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
U2AF1-212ENST00000496462 ABCA8O94911 1581 aa12.94□□□□□ -0.34
U2AF1-212ENST00000496462 RSPH4AQ5TD94 716 aa12.93□□□□□ -0.34
U2AF1-212ENST00000496462 PPARGC1BQ86YN6 1023 aaKnown RBP12.93□□□□□ -0.34
U2AF1-212ENST00000496462 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
U2AF1-212ENST00000496462 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
U2AF1-212ENST00000496462 TROQ12816 1431 aaPredicted RBP12.92□□□□□ -0.34
U2AF1-212ENST00000496462 KDM6BO15054 1643 aa12.91□□□□□ -0.34
U2AF1-212ENST00000496462 ITGAEP38570 1179 aa12.9□□□□□ -0.34
U2AF1-212ENST00000496462 TEX14Q8IWB6 1497 aa12.9□□□□□ -0.35
U2AF1-212ENST00000496462 NUP153P49790 1475 aaKnown RBP12.89□□□□□ -0.35
U2AF1-212ENST00000496462 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
U2AF1-212ENST00000496462 RAPGEF3O95398 923 aa12.87□□□□□ -0.35
U2AF1-212ENST00000496462 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
U2AF1-212ENST00000496462 CDK13Q14004 1512 aaKnown RBP12.86□□□□□ -0.35
U2AF1-212ENST00000496462 ARID4BQ4LE39 1312 aaPredicted RBP12.86□□□□□ -0.35
U2AF1-212ENST00000496462 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
U2AF1-212ENST00000496462 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
U2AF1-212ENST00000496462 GLI2P10070 1586 aa12.83□□□□□ -0.35
U2AF1-212ENST00000496462 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
U2AF1-212ENST00000496462 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
U2AF1-212ENST00000496462 MAP3K1Q13233 1512 aa12.81□□□□□ -0.36
U2AF1-212ENST00000496462 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
U2AF1-212ENST00000496462 KIF14Q15058 1648 aa12.8□□□□□ -0.36
U2AF1-212ENST00000496462 SPAG9O60271 1321 aaKnown RBP12.79□□□□□ -0.36
U2AF1-212ENST00000496462 ARHGAP5Q13017 1502 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms