RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 ERCC6L2Q5T890 1561 aa30.94■■■□□ 2.54
COPS6-210ENST00000496358 JPH4Q96JJ6 628 aa30.94■■■□□ 2.54
COPS6-210ENST00000496358 KIAA0586Q9BVV6 1533 aa30.91■■■□□ 2.54
COPS6-210ENST00000496358 PRG4Q92954 1404 aaPredicted RBP30.89■■■□□ 2.53
COPS6-210ENST00000496358 RAPGEF2Q9Y4G8 1499 aa30.89■■■□□ 2.53
COPS6-210ENST00000496358 AEBP2Q6ZN18 517 aaPredicted RBP30.83■■■□□ 2.53
COPS6-210ENST00000496358 CHIC1Q5VXU3 224 aa30.8■■■□□ 2.52
COPS6-210ENST00000496358 IQGAP2Q13576 1575 aa30.75■■■□□ 2.51
COPS6-210ENST00000496358 PRXQ9BXM0 1461 aa30.72■■■□□ 2.51
COPS6-210ENST00000496358 CSRNP3Q8WYN3 585 aa30.72■■■□□ 2.51
COPS6-210ENST00000496358 EEA1Q15075 1411 aa30.71■■■□□ 2.51
COPS6-210ENST00000496358 CTTNBP2Q8WZ74 1663 aa30.65■■■□□ 2.5
COPS6-210ENST00000496358 FAM9AQ8IZU1 332 aaPredicted RBP30.64■■■□□ 2.5
COPS6-210ENST00000496358 CARMIL2Q6F5E8 1435 aa30.61■■■□□ 2.49
COPS6-210ENST00000496358 UGGT2Q9NYU1 1516 aa30.54■■■□□ 2.48
COPS6-210ENST00000496358 DISP1Q96F81 1524 aa30.51■■■□□ 2.47
COPS6-210ENST00000496358 TTBK1Q5TCY1 1321 aaPredicted RBP30.5■■■□□ 2.47
COPS6-210ENST00000496358 PTPRGP23470 1445 aa30.5■■■□□ 2.47
COPS6-210ENST00000496358 TNIKQ9UKE5 1360 aa30.5■■■□□ 2.47
COPS6-210ENST00000496358 KIAA0556O60303 1618 aa30.44■■■□□ 2.46
COPS6-210ENST00000496358 ADCY10Q96PN6 1610 aa30.42■■■□□ 2.46
COPS6-210ENST00000496358 NPM1P06748 294 aaKnown RBP eCLIP30.41■■■□□ 2.46
COPS6-210ENST00000496358 KIF21BO75037 1637 aa30.4■■■□□ 2.46
COPS6-210ENST00000496358 GOLGA3Q08378 1498 aa30.39■■■□□ 2.46
COPS6-210ENST00000496358 UACAQ9BZF9 1416 aa30.29■■■□□ 2.44
COPS6-210ENST00000496358 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
COPS6-210ENST00000496358 UHRF1BP1LA0JNW5 1464 aa30.25■■■□□ 2.43
COPS6-210ENST00000496358 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
COPS6-210ENST00000496358 P3H3Q8IVL6 736 aa30.23■■■□□ 2.43
COPS6-210ENST00000496358 ABCC2Q92887 1545 aa30.22■■■□□ 2.43
COPS6-210ENST00000496358 RANGAP1P46060 587 aaPredicted RBP30.22■■■□□ 2.43
COPS6-210ENST00000496358 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
COPS6-210ENST00000496358 SAMD9Q5K651 1589 aa30.2■■■□□ 2.42
COPS6-210ENST00000496358 KIF13AQ9H1H9 1805 aa30.18■■■□□ 2.42
COPS6-210ENST00000496358 PLB1Q6P1J6 1458 aa30.15■■■□□ 2.42
COPS6-210ENST00000496358 ABCC10Q5T3U5 1492 aa30.12■■■□□ 2.41
COPS6-210ENST00000496358 KDM5BQ9UGL1 1544 aa30.11■■■□□ 2.41
COPS6-210ENST00000496358 ABCA8O94911 1581 aa30.11■■■□□ 2.41
COPS6-210ENST00000496358 FAM69CQ0P6D2 419 aa30.1■■■□□ 2.41
COPS6-210ENST00000496358 ZCCHC11Q5TAX3 1644 aaKnown RBP30.08■■■□□ 2.41
COPS6-210ENST00000496358 DIP2BQ9P265 1576 aa30.07■■■□□ 2.4
COPS6-210ENST00000496358 ASXL2Q76L83 1435 aa30.05■■■□□ 2.4
COPS6-210ENST00000496358 EFCAB5A4FU69 1503 aa30.04■■■□□ 2.4
COPS6-210ENST00000496358 FHOD3Q2V2M9 1422 aa30.03■■■□□ 2.4
COPS6-210ENST00000496358 RAPGEF6Q8TEU7 1601 aa29.96■■■□□ 2.39
COPS6-210ENST00000496358 TSPOAP1O95153 1857 aa29.92■■■□□ 2.38
COPS6-210ENST00000496358 ARID3CA6NKF2 412 aa29.91■■■□□ 2.38
COPS6-210ENST00000496358 WDR7Q9Y4E6 1490 aa29.88■■■□□ 2.37
COPS6-210ENST00000496358 GLI2P10070 1586 aa29.88■■■□□ 2.37
COPS6-210ENST00000496358 ARHGAP35Q9NRY4 1499 aa29.87■■■□□ 2.37
COPS6-210ENST00000496358 EPRSP07814 1512 aaKnown RBP29.87■■■□□ 2.37
COPS6-210ENST00000496358 ATP10BO94823 1461 aa29.87■■■□□ 2.37
COPS6-210ENST00000496358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
COPS6-210ENST00000496358 HNRNPUL2Q1KMD3 747 aaKnown RBP29.81■■■□□ 2.36
COPS6-210ENST00000496358 NUP153P49790 1475 aaKnown RBP29.8■■■□□ 2.36
COPS6-210ENST00000496358 KCNH8Q96L42 1107 aa29.8■■■□□ 2.36
COPS6-210ENST00000496358 FMN1Q68DA7 1419 aa29.78■■■□□ 2.36
COPS6-210ENST00000496358 MAP3K4Q9Y6R4 1608 aa29.76■■■□□ 2.35
COPS6-210ENST00000496358 PPRC1Q5VV67 1664 aaKnown RBP29.72■■■□□ 2.35
COPS6-210ENST00000496358 ATP1B4Q9UN42 357 aaPredicted RBP29.7■■■□□ 2.35
COPS6-210ENST00000496358 CFAP43Q8NDM7 1665 aa29.68■■■□□ 2.34
COPS6-210ENST00000496358 CLIP1P30622 1438 aa29.68■■■□□ 2.34
COPS6-210ENST00000496358 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
COPS6-210ENST00000496358 KDM6BO15054 1643 aa29.65■■■□□ 2.34
COPS6-210ENST00000496358 PLEKHD1A6NEE1 506 aa29.64■■■□□ 2.34
COPS6-210ENST00000496358 CD109Q6YHK3 1445 aa29.63■■■□□ 2.33
COPS6-210ENST00000496358 TEX14Q8IWB6 1497 aa29.63■■■□□ 2.33
COPS6-210ENST00000496358 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
COPS6-210ENST00000496358 ABCA9Q8IUA7 1624 aa29.56■■■□□ 2.32
COPS6-210ENST00000496358 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
COPS6-210ENST00000496358 MAGI3Q5TCQ9 1506 aa29.55■■■□□ 2.32
COPS6-210ENST00000496358 CASKIN1Q8WXD9 1431 aa29.53■■■□□ 2.32
COPS6-210ENST00000496358 PCF11O94913 1555 aaKnown RBP29.52■■■□□ 2.32
COPS6-210ENST00000496358 LRRIQ1Q96JM4 1722 aa29.51■■■□□ 2.32
COPS6-210ENST00000496358 ILDR1Q86SU0 546 aaPredicted RBP29.51■■■□□ 2.31
COPS6-210ENST00000496358 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
COPS6-210ENST00000496358 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
COPS6-210ENST00000496358 FYCO1Q9BQS8 1478 aa29.45■■■□□ 2.31
COPS6-210ENST00000496358 CCDC18Q5T9S5 1454 aa29.43■■■□□ 2.3
COPS6-210ENST00000496358 COL17A1Q9UMD9 1497 aaPredicted RBP29.43■■■□□ 2.3
COPS6-210ENST00000496358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.42■■■□□ 2.31e-9■■■□□ 15.8
COPS6-210ENST00000496358 TTC37Q6PGP7 1564 aa29.38■■■□□ 2.29
COPS6-210ENST00000496358 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
COPS6-210ENST00000496358 PHLDB1Q86UU1 1377 aa29.34■■■□□ 2.29
COPS6-210ENST00000496358 NEO1Q92859 1461 aa29.33■■■□□ 2.29
COPS6-210ENST00000496358 KIF14Q15058 1648 aa29.33■■■□□ 2.29
COPS6-210ENST00000496358 KDM4FA0A1W2PPD8 638 aa29.32■■■□□ 2.28
COPS6-210ENST00000496358 ARAP3Q8WWN8 1544 aa29.31■■■□□ 2.28
COPS6-210ENST00000496358 MYO5CQ9NQX4 1742 aa29.27■■■□□ 2.28
COPS6-210ENST00000496358 CFAP74Q9C0B2 1584 aa29.26■■■□□ 2.28
COPS6-210ENST00000496358 FANCAO15360 1455 aa29.26■■■□□ 2.27
COPS6-210ENST00000496358 PLCH2O75038 1416 aa29.24■■■□□ 2.27
COPS6-210ENST00000496358 AKNAQ7Z591 1439 aa29.22■■■□□ 2.27
COPS6-210ENST00000496358 RAPGEF3O95398 923 aa29.19■■■□□ 2.26
COPS6-210ENST00000496358 EFCAB2Q5VUJ9 269 aa29.16■■■□□ 2.26
COPS6-210ENST00000496358 VPS8Q8N3P4 1428 aa29.16■■■□□ 2.26
COPS6-210ENST00000496358 DENND4BO75064 1496 aaPredicted RBP29.14■■■□□ 2.26
COPS6-210ENST00000496358 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
COPS6-210ENST00000496358 ARHGAP5Q13017 1502 aa29.13■■■□□ 2.25
COPS6-210ENST00000496358 CDC42BPBQ9Y5S2 1711 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms