RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 KIAA0586Q9BVV6 1533 aa35.93■■■■□ 3.34
PPM1F-208ENST00000496143 ERCC6L2Q5T890 1561 aa35.9■■■■□ 3.34
PPM1F-208ENST00000496143 PRG4Q92954 1404 aaPredicted RBP35.89■■■■□ 3.34
PPM1F-208ENST00000496143 RAPGEF2Q9Y4G8 1499 aa35.85■■■■□ 3.33
PPM1F-208ENST00000496143 IQGAP2Q13576 1575 aa35.68■■■■□ 3.3
PPM1F-208ENST00000496143 EEA1Q15075 1411 aa35.65■■■■□ 3.3
PPM1F-208ENST00000496143 PRXQ9BXM0 1461 aa35.64■■■■□ 3.3
PPM1F-208ENST00000496143 CARMIL2Q6F5E8 1435 aa35.6■■■■□ 3.29
PPM1F-208ENST00000496143 TRHP20396 242 aaPredicted RBP35.58■■■■□ 3.29
PPM1F-208ENST00000496143 CSRNP3Q8WYN3 585 aa35.58■■■■□ 3.29
PPM1F-208ENST00000496143 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
PPM1F-208ENST00000496143 UGGT2Q9NYU1 1516 aa35.48■■■■□ 3.27
PPM1F-208ENST00000496143 CTTNBP2Q8WZ74 1663 aa35.48■■■■□ 3.27
PPM1F-208ENST00000496143 TNIKQ9UKE5 1360 aa35.47■■■■□ 3.27
PPM1F-208ENST00000496143 PTPRGP23470 1445 aa35.46■■■■□ 3.27
PPM1F-208ENST00000496143 DISP1Q96F81 1524 aa35.41■■■■□ 3.26
PPM1F-208ENST00000496143 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
PPM1F-208ENST00000496143 FAM9AQ8IZU1 332 aaPredicted RBP35.38■■■■□ 3.25
PPM1F-208ENST00000496143 TTBK1Q5TCY1 1321 aaPredicted RBP35.35■■■■□ 3.25
PPM1F-208ENST00000496143 GOLGA3Q08378 1498 aa35.34■■■■□ 3.25
PPM1F-208ENST00000496143 KIAA0556O60303 1618 aa35.33■■■■□ 3.25
PPM1F-208ENST00000496143 ADCY10Q96PN6 1610 aa35.33■■■■□ 3.25
PPM1F-208ENST00000496143 KIF21BO75037 1637 aa35.22■■■■□ 3.23
PPM1F-208ENST00000496143 UACAQ9BZF9 1416 aa35.21■■■■□ 3.23
PPM1F-208ENST00000496143 MAPKBP1O60336 1514 aa35.21■■■■□ 3.23
PPM1F-208ENST00000496143 UHRF1BP1LA0JNW5 1464 aa35.19■■■■□ 3.22
PPM1F-208ENST00000496143 ABCC2Q92887 1545 aa35.16■■■■□ 3.22
PPM1F-208ENST00000496143 ABCC10Q5T3U5 1492 aa35.07■■■■□ 3.2
PPM1F-208ENST00000496143 SAMD9Q5K651 1589 aa35.01■■■■□ 3.2
PPM1F-208ENST00000496143 FAM69CQ0P6D2 419 aa35.01■■■■□ 3.2
PPM1F-208ENST00000496143 KDM5BQ9UGL1 1544 aa35.01■■■■□ 3.19
PPM1F-208ENST00000496143 KIF13AQ9H1H9 1805 aa35■■■■□ 3.19
PPM1F-208ENST00000496143 PLB1Q6P1J6 1458 aa34.99■■■■□ 3.19
PPM1F-208ENST00000496143 P3H3Q8IVL6 736 aa34.98■■■■□ 3.19
PPM1F-208ENST00000496143 DIP2BQ9P265 1576 aa34.97■■■■□ 3.19
PPM1F-208ENST00000496143 UBTFP17480 764 aaKnown RBP34.96■■■■□ 3.19
PPM1F-208ENST00000496143 ABCA8O94911 1581 aa34.96■■■■□ 3.19
PPM1F-208ENST00000496143 ASXL2Q76L83 1435 aa34.95■■■■□ 3.19
PPM1F-208ENST00000496143 RANGAP1P46060 587 aaPredicted RBP34.93■■■■□ 3.18
PPM1F-208ENST00000496143 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
PPM1F-208ENST00000496143 ZCCHC11Q5TAX3 1644 aaKnown RBP34.9■■■■□ 3.18
PPM1F-208ENST00000496143 EFCAB5A4FU69 1503 aa34.88■■■■□ 3.17
PPM1F-208ENST00000496143 FHOD3Q2V2M9 1422 aa34.81■■■■□ 3.16
PPM1F-208ENST00000496143 GLI2P10070 1586 aa34.77■■■■□ 3.16
PPM1F-208ENST00000496143 WDR7Q9Y4E6 1490 aa34.75■■■■□ 3.15
PPM1F-208ENST00000496143 RAPGEF6Q8TEU7 1601 aa34.74■■■■□ 3.15
PPM1F-208ENST00000496143 EPRSP07814 1512 aaKnown RBP34.73■■■■□ 3.15
PPM1F-208ENST00000496143 ATP10BO94823 1461 aa34.66■■■■□ 3.14
PPM1F-208ENST00000496143 ARID3CA6NKF2 412 aa34.64■■■■□ 3.14
PPM1F-208ENST00000496143 TSPOAP1O95153 1857 aa34.63■■■■□ 3.13
PPM1F-208ENST00000496143 ARHGAP35Q9NRY4 1499 aa34.61■■■■□ 3.13
PPM1F-208ENST00000496143 NUP153P49790 1475 aaKnown RBP34.6■■■■□ 3.13
PPM1F-208ENST00000496143 FMN1Q68DA7 1419 aa34.58■■■■□ 3.13
PPM1F-208ENST00000496143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.58■■■■□ 3.13
PPM1F-208ENST00000496143 HNRNPUL2Q1KMD3 747 aaKnown RBP34.58■■■■□ 3.13
PPM1F-208ENST00000496143 MAP3K4Q9Y6R4 1608 aa34.57■■■■□ 3.12
PPM1F-208ENST00000496143 KCNH8Q96L42 1107 aa34.57■■■■□ 3.12
PPM1F-208ENST00000496143 TEX14Q8IWB6 1497 aa34.52■■■■□ 3.12
PPM1F-208ENST00000496143 KDM6BO15054 1643 aa34.51■■■■□ 3.11
PPM1F-208ENST00000496143 PPRC1Q5VV67 1664 aaKnown RBP34.49■■■■□ 3.11
PPM1F-208ENST00000496143 CFAP43Q8NDM7 1665 aa34.47■■■■□ 3.11
PPM1F-208ENST00000496143 CD109Q6YHK3 1445 aa34.46■■■■□ 3.11
PPM1F-208ENST00000496143 PLEKHD1A6NEE1 506 aa34.42■■■■□ 3.1
PPM1F-208ENST00000496143 HECW1Q76N89 1606 aa34.41■■■■□ 3.1
PPM1F-208ENST00000496143 MAGI3Q5TCQ9 1506 aa34.4■■■■□ 3.1
PPM1F-208ENST00000496143 ATP1B4Q9UN42 357 aaPredicted RBP34.39■■■■□ 3.1
PPM1F-208ENST00000496143 CLIP1P30622 1438 aa34.38■■■■□ 3.09
PPM1F-208ENST00000496143 ABCA9Q8IUA7 1624 aa34.34■■■■□ 3.09
PPM1F-208ENST00000496143 CDK13Q14004 1512 aaKnown RBP34.32■■■■□ 3.08
PPM1F-208ENST00000496143 CDK11AQ9UQ88 783 aaPredicted RBP34.28■■■■□ 3.08
PPM1F-208ENST00000496143 CASKIN1Q8WXD9 1431 aa34.25■■■■□ 3.07
PPM1F-208ENST00000496143 PCF11O94913 1555 aaKnown RBP34.2■■■■□ 3.07
PPM1F-208ENST00000496143 COL17A1Q9UMD9 1497 aaPredicted RBP34.2■■■■□ 3.06
PPM1F-208ENST00000496143 PHLDB1Q86UU1 1377 aa34.19■■■■□ 3.06
PPM1F-208ENST00000496143 CCDC18Q5T9S5 1454 aa34.18■■■■□ 3.06
PPM1F-208ENST00000496143 FYCO1Q9BQS8 1478 aa34.17■■■■□ 3.06
PPM1F-208ENST00000496143 CEP162Q5TB80 1403 aa34.16■■■■□ 3.06
PPM1F-208ENST00000496143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.14■■■■□ 3.06
PPM1F-208ENST00000496143 NEO1Q92859 1461 aa34.14■■■■□ 3.06
PPM1F-208ENST00000496143 ARAP3Q8WWN8 1544 aa34.11■■■■□ 3.05
PPM1F-208ENST00000496143 TROQ12816 1431 aaPredicted RBP34.1■■■■□ 3.05
PPM1F-208ENST00000496143 LRRIQ1Q96JM4 1722 aa34.07■■■■□ 3.05
PPM1F-208ENST00000496143 TTC37Q6PGP7 1564 aa34.07■■■■□ 3.05
PPM1F-208ENST00000496143 LOC105371045A0A1W2PR82 267 aa34.06■■■■□ 3.04
PPM1F-208ENST00000496143 KIF14Q15058 1648 aa34.05■■■■□ 3.04
PPM1F-208ENST00000496143 CFAP74Q9C0B2 1584 aa34.03■■■■□ 3.04
PPM1F-208ENST00000496143 FANCAO15360 1455 aa34.01■■■■□ 3.03
PPM1F-208ENST00000496143 AEBP2Q6ZN18 517 aaPredicted RBP33.99■■■■□ 3.03
PPM1F-208ENST00000496143 PLCH2O75038 1416 aa33.97■■■■□ 3.03
PPM1F-208ENST00000496143 AKNAQ7Z591 1439 aa33.96■■■■□ 3.03
PPM1F-208ENST00000496143 MYO5CQ9NQX4 1742 aa33.91■■■■□ 3.02
PPM1F-208ENST00000496143 DENND4BO75064 1496 aaPredicted RBP33.89■■■■□ 3.02
PPM1F-208ENST00000496143 RAPGEF3O95398 923 aa33.88■■■■□ 3.01
PPM1F-208ENST00000496143 EFCAB2Q5VUJ9 269 aa33.88■■■■□ 3.01
PPM1F-208ENST00000496143 ADGRL1O94910 1474 aa33.82■■■■□ 3.01
PPM1F-208ENST00000496143 ARHGAP5Q13017 1502 aa33.82■■■■□ 3
PPM1F-208ENST00000496143 FRMPD1Q5SYB0 1578 aa33.81■■■■□ 3
PPM1F-208ENST00000496143 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
PPM1F-208ENST00000496143 VPS8Q8N3P4 1428 aa33.78■■■■□ 3
PPM1F-208ENST00000496143 SCAPERQ9BY12 1400 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms