RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
ECHDC3-204ENST00000495787 NUP160Q12769 1436 aa17.3■□□□□ 0.36
ECHDC3-204ENST00000495787 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
ECHDC3-204ENST00000495787 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
ECHDC3-204ENST00000495787 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
ECHDC3-204ENST00000495787 ERICH3Q5RHP9 1530 aa17.26■□□□□ 0.35
ECHDC3-204ENST00000495787 SHROOM2Q13796 1616 aa17.25■□□□□ 0.35
ECHDC3-204ENST00000495787 IGF1RP08069 1367 aa17.25■□□□□ 0.35
ECHDC3-204ENST00000495787 TNIKQ9UKE5 1360 aa17.25■□□□□ 0.35
ECHDC3-204ENST00000495787 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
ECHDC3-204ENST00000495787 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
ECHDC3-204ENST00000495787 KIF13AQ9H1H9 1805 aa17.2■□□□□ 0.34
ECHDC3-204ENST00000495787 UBTFP17480 764 aaKnown RBP17.2■□□□□ 0.34
ECHDC3-204ENST00000495787 CUL7Q14999 1698 aa17.17■□□□□ 0.34
ECHDC3-204ENST00000495787 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
ECHDC3-204ENST00000495787 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
ECHDC3-204ENST00000495787 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
ECHDC3-204ENST00000495787 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
ECHDC3-204ENST00000495787 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
ECHDC3-204ENST00000495787 FAM69CQ0P6D2 419 aa17.11■□□□□ 0.33
ECHDC3-204ENST00000495787 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
ECHDC3-204ENST00000495787 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
ECHDC3-204ENST00000495787 DIP2BQ9P265 1576 aa17.04■□□□□ 0.32
ECHDC3-204ENST00000495787 CLIP1P30622 1438 aa17.02■□□□□ 0.31
ECHDC3-204ENST00000495787 KDM6BO15054 1643 aa17■□□□□ 0.31
ECHDC3-204ENST00000495787 ADCY10Q96PN6 1610 aa17■□□□□ 0.31
ECHDC3-204ENST00000495787 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
ECHDC3-204ENST00000495787 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
ECHDC3-204ENST00000495787 KIAA0586Q9BVV6 1533 aa16.94■□□□□ 0.3
ECHDC3-204ENST00000495787 TSPOAP1O95153 1857 aa16.9■□□□□ 0.3
ECHDC3-204ENST00000495787 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
ECHDC3-204ENST00000495787 ARHGAP35Q9NRY4 1499 aa16.87■□□□□ 0.29
ECHDC3-204ENST00000495787 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
ECHDC3-204ENST00000495787 ILDR1Q86SU0 546 aaPredicted RBP16.86■□□□□ 0.29
ECHDC3-204ENST00000495787 PTPRGP23470 1445 aa16.86■□□□□ 0.29
ECHDC3-204ENST00000495787 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
ECHDC3-204ENST00000495787 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
ECHDC3-204ENST00000495787 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
ECHDC3-204ENST00000495787 GLI2P10070 1586 aa16.8■□□□□ 0.28
ECHDC3-204ENST00000495787 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
ECHDC3-204ENST00000495787 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
ECHDC3-204ENST00000495787 ASXL2Q76L83 1435 aa16.79■□□□□ 0.28
ECHDC3-204ENST00000495787 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
ECHDC3-204ENST00000495787 ADGRL1O94910 1474 aa16.78■□□□□ 0.28
ECHDC3-204ENST00000495787 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
ECHDC3-204ENST00000495787 PPRC1Q5VV67 1664 aaKnown RBP16.76■□□□□ 0.27
ECHDC3-204ENST00000495787 UHRF1BP1LA0JNW5 1464 aa16.74■□□□□ 0.27
ECHDC3-204ENST00000495787 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
ECHDC3-204ENST00000495787 UACAQ9BZF9 1416 aa16.71■□□□□ 0.27
ECHDC3-204ENST00000495787 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
ECHDC3-204ENST00000495787 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 APLP2Q06481 763 aa16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 P3H3Q8IVL6 736 aa16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
ECHDC3-204ENST00000495787 MAP3K4Q9Y6R4 1608 aa16.67■□□□□ 0.26
ECHDC3-204ENST00000495787 KDM5BQ9UGL1 1544 aa16.67■□□□□ 0.26
ECHDC3-204ENST00000495787 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
ECHDC3-204ENST00000495787 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
ECHDC3-204ENST00000495787 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
ECHDC3-204ENST00000495787 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
ECHDC3-204ENST00000495787 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
ECHDC3-204ENST00000495787 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
ECHDC3-204ENST00000495787 KIAA0556O60303 1618 aa16.63■□□□□ 0.25
ECHDC3-204ENST00000495787 CASKIN1Q8WXD9 1431 aa16.62■□□□□ 0.25
ECHDC3-204ENST00000495787 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
ECHDC3-204ENST00000495787 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
ECHDC3-204ENST00000495787 ZCCHC11Q5TAX3 1644 aaKnown RBP16.6■□□□□ 0.25
ECHDC3-204ENST00000495787 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
ECHDC3-204ENST00000495787 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
ECHDC3-204ENST00000495787 WDR7Q9Y4E6 1490 aa16.57■□□□□ 0.24
ECHDC3-204ENST00000495787 MAGI3Q5TCQ9 1506 aa16.52■□□□□ 0.24
ECHDC3-204ENST00000495787 HECW1Q76N89 1606 aa16.52■□□□□ 0.23
ECHDC3-204ENST00000495787 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
ECHDC3-204ENST00000495787 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
ECHDC3-204ENST00000495787 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
ECHDC3-204ENST00000495787 ATP1B4Q9UN42 357 aaPredicted RBP16.5■□□□□ 0.23
ECHDC3-204ENST00000495787 LRRC9Q6ZRR7 1453 aa16.48■□□□□ 0.23
ECHDC3-204ENST00000495787 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
ECHDC3-204ENST00000495787 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
ECHDC3-204ENST00000495787 KCNH8Q96L42 1107 aa16.45■□□□□ 0.22
ECHDC3-204ENST00000495787 ABCA8O94911 1581 aa16.43■□□□□ 0.22
ECHDC3-204ENST00000495787 FBXO41Q8TF61 875 aa16.43■□□□□ 0.22
ECHDC3-204ENST00000495787 ARAP3Q8WWN8 1544 aa16.4■□□□□ 0.22
ECHDC3-204ENST00000495787 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
ECHDC3-204ENST00000495787 EHBP1L1Q8N3D4 1523 aa16.39■□□□□ 0.21
ECHDC3-204ENST00000495787 MTUS2Q5JR59 1369 aa16.38■□□□□ 0.21
ECHDC3-204ENST00000495787 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
ECHDC3-204ENST00000495787 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
ECHDC3-204ENST00000495787 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
ECHDC3-204ENST00000495787 PTPRMP28827 1452 aa16.35■□□□□ 0.21
ECHDC3-204ENST00000495787 SUPT6HQ7KZ85 1726 aaKnown RBP16.35■□□□□ 0.21
ECHDC3-204ENST00000495787 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.2
ECHDC3-204ENST00000495787 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
ECHDC3-204ENST00000495787 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
ECHDC3-204ENST00000495787 ATP10BO94823 1461 aa16.29■□□□□ 0.2
ECHDC3-204ENST00000495787 NCOA2Q15596 1464 aa16.29■□□□□ 0.2
ECHDC3-204ENST00000495787 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
ECHDC3-204ENST00000495787 ARID3CA6NKF2 412 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms