RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
CHTOP-206ENST00000495554 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
CHTOP-206ENST00000495554 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
CHTOP-206ENST00000495554 FHAD1B1AJZ9 1412 aa22.08■■□□□ 1.12
CHTOP-206ENST00000495554 FHOD3Q2V2M9 1422 aa22.07■■□□□ 1.12
CHTOP-206ENST00000495554 AQRO60306 1485 aaKnown RBP eCLIP22.07■■□□□ 1.125e-9■■■■■ 42.9
CHTOP-206ENST00000495554 PRKCSHP14314 528 aaPredicted RBP22.06■■□□□ 1.12
CHTOP-206ENST00000495554 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
CHTOP-206ENST00000495554 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
CHTOP-206ENST00000495554 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
CHTOP-206ENST00000495554 WDR62O43379 1518 aa22.03■■□□□ 1.12
CHTOP-206ENST00000495554 PCF11O94913 1555 aaKnown RBP22.01■■□□□ 1.11
CHTOP-206ENST00000495554 PBRM1Q86U86 1689 aa22■■□□□ 1.11
CHTOP-206ENST00000495554 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
CHTOP-206ENST00000495554 IFT140Q96RY7 1462 aa21.98■■□□□ 1.11
CHTOP-206ENST00000495554 ZNF608Q9ULD9 1512 aaPredicted RBP21.97■■□□□ 1.11
CHTOP-206ENST00000495554 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
CHTOP-206ENST00000495554 CASKIN1Q8WXD9 1431 aa21.97■■□□□ 1.11
CHTOP-206ENST00000495554 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
CHTOP-206ENST00000495554 SAMD9Q5K651 1589 aa21.95■■□□□ 1.1
CHTOP-206ENST00000495554 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
CHTOP-206ENST00000495554 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
CHTOP-206ENST00000495554 FYCO1Q9BQS8 1478 aa21.94■■□□□ 1.1
CHTOP-206ENST00000495554 ZNF316A6NFI3 1004 aaPredicted RBP21.93■■□□□ 1.1
CHTOP-206ENST00000495554 ATP1B4Q9UN42 357 aaPredicted RBP21.93■■□□□ 1.1
CHTOP-206ENST00000495554 CFAP43Q8NDM7 1665 aa21.92■■□□□ 1.1
CHTOP-206ENST00000495554 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
CHTOP-206ENST00000495554 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
CHTOP-206ENST00000495554 ERCC6Q03468 1493 aa21.91■■□□□ 1.1
CHTOP-206ENST00000495554 SLC24A1O60721 1099 aa21.91■■□□□ 1.1
CHTOP-206ENST00000495554 SNAPC4Q5SXM2 1469 aa21.89■■□□□ 1.1
CHTOP-206ENST00000495554 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
CHTOP-206ENST00000495554 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CHTOP-206ENST00000495554 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
CHTOP-206ENST00000495554 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
CHTOP-206ENST00000495554 EIF4G3O43432 1585 aaKnown RBP21.79■■□□□ 1.08
CHTOP-206ENST00000495554 ITGAEP38570 1179 aa21.78■■□□□ 1.08
CHTOP-206ENST00000495554 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
CHTOP-206ENST00000495554 UGGT2Q9NYU1 1516 aa21.72■■□□□ 1.07
CHTOP-206ENST00000495554 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
CHTOP-206ENST00000495554 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
CHTOP-206ENST00000495554 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
CHTOP-206ENST00000495554 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
CHTOP-206ENST00000495554 RAB3GAP2Q9H2M9 1393 aa21.68■■□□□ 1.06
CHTOP-206ENST00000495554 MAGI1Q96QZ7 1491 aaPredicted RBP21.67■■□□□ 1.06
CHTOP-206ENST00000495554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.66■■□□□ 1.06
CHTOP-206ENST00000495554 SETD5Q9C0A6 1442 aa21.64■■□□□ 1.06
CHTOP-206ENST00000495554 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
CHTOP-206ENST00000495554 FGD6Q6ZV73 1430 aa21.63■■□□□ 1.05
CHTOP-206ENST00000495554 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
CHTOP-206ENST00000495554 SYNJ2O15056 1496 aa21.62■■□□□ 1.05
CHTOP-206ENST00000495554 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
CHTOP-206ENST00000495554 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
CHTOP-206ENST00000495554 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
CHTOP-206ENST00000495554 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
CHTOP-206ENST00000495554 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
CHTOP-206ENST00000495554 EPRSP07814 1512 aaKnown RBP21.59■■□□□ 1.05
CHTOP-206ENST00000495554 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
CHTOP-206ENST00000495554 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.05
CHTOP-206ENST00000495554 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
CHTOP-206ENST00000495554 KIAA0556O60303 1618 aa21.58■■□□□ 1.05
CHTOP-206ENST00000495554 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
CHTOP-206ENST00000495554 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
CHTOP-206ENST00000495554 SUPT6HQ7KZ85 1726 aaKnown RBP21.56■■□□□ 1.04
CHTOP-206ENST00000495554 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
CHTOP-206ENST00000495554 FBLN2P98095 1184 aa21.55■■□□□ 1.04
CHTOP-206ENST00000495554 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
CHTOP-206ENST00000495554 MAPKBP1O60336 1514 aa21.53■■□□□ 1.04
CHTOP-206ENST00000495554 NUP160Q12769 1436 aa21.53■■□□□ 1.04
CHTOP-206ENST00000495554 NEUROD1Q13562 356 aa21.52■■□□□ 1.04
CHTOP-206ENST00000495554 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
CHTOP-206ENST00000495554 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
CHTOP-206ENST00000495554 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
CHTOP-206ENST00000495554 MIER1Q8N108 512 aa21.49■■□□□ 1.03
CHTOP-206ENST00000495554 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
CHTOP-206ENST00000495554 NUP153P49790 1475 aaKnown RBP21.46■■□□□ 1.03
CHTOP-206ENST00000495554 PTPN23Q9H3S7 1636 aa21.43■■□□□ 1.02
CHTOP-206ENST00000495554 RAPGEF6Q8TEU7 1601 aa21.43■■□□□ 1.02
CHTOP-206ENST00000495554 TCOF1Q13428 1488 aaKnown RBP21.41■■□□□ 1.02
CHTOP-206ENST00000495554 HFM1A2PYH4 1435 aa21.39■■□□□ 1.02
CHTOP-206ENST00000495554 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
CHTOP-206ENST00000495554 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
CHTOP-206ENST00000495554 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
CHTOP-206ENST00000495554 MIA2Q96PC5 1412 aa21.36■■□□□ 1.01
CHTOP-206ENST00000495554 NAIPQ13075 1403 aa21.36■■□□□ 1.01
CHTOP-206ENST00000495554 SIN3AQ96ST3 1273 aa21.33■■□□□ 1.01
CHTOP-206ENST00000495554 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
CHTOP-206ENST00000495554 YTHDC1Q96MU7 727 aaKnown RBP21.31■■□□□ 1
CHTOP-206ENST00000495554 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
CHTOP-206ENST00000495554 UACAQ9BZF9 1416 aa21.28■■□□□ 1
CHTOP-206ENST00000495554 CHIC2Q9UKJ5 165 aa21.28■■□□□ 1
CHTOP-206ENST00000495554 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
CHTOP-206ENST00000495554 TROQ12816 1431 aaPredicted RBP21.27■■□□□ 1
CHTOP-206ENST00000495554 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
CHTOP-206ENST00000495554 ABCA8O94911 1581 aa21.25■□□□□ 0.99
CHTOP-206ENST00000495554 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
CHTOP-206ENST00000495554 CHD1O14646 1710 aa21.23■□□□□ 0.99
CHTOP-206ENST00000495554 AKNAQ7Z591 1439 aa21.22■□□□□ 0.99
CHTOP-206ENST00000495554 ATP10BO94823 1461 aa21.2■□□□□ 0.98
CHTOP-206ENST00000495554 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms