RNA–Protein interactions for RNA: ENST00000495540.1

PROM2-210, Transcript of prominin 2, humanhuman

TSL 3

Gene PROM2, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-210ENST00000495540 IFT140Q96RY7 1462 aa21.83■■□□□ 1.08
PROM2-210ENST00000495540 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
PROM2-210ENST00000495540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.8■■□□□ 1.08
PROM2-210ENST00000495540 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
PROM2-210ENST00000495540 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
PROM2-210ENST00000495540 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.07
PROM2-210ENST00000495540 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
PROM2-210ENST00000495540 GRIN2BQ13224 1484 aa21.75■■□□□ 1.07
PROM2-210ENST00000495540 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
PROM2-210ENST00000495540 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
PROM2-210ENST00000495540 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
PROM2-210ENST00000495540 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
PROM2-210ENST00000495540 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
PROM2-210ENST00000495540 CFAP43Q8NDM7 1665 aa21.69■■□□□ 1.06
PROM2-210ENST00000495540 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
PROM2-210ENST00000495540 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
PROM2-210ENST00000495540 CASKIN1Q8WXD9 1431 aa21.69■■□□□ 1.06
PROM2-210ENST00000495540 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
PROM2-210ENST00000495540 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
PROM2-210ENST00000495540 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
PROM2-210ENST00000495540 DNAJC5Q9H3Z4 198 aa21.66■■□□□ 1.06
PROM2-210ENST00000495540 LRRC9Q6ZRR7 1453 aa21.65■■□□□ 1.06
PROM2-210ENST00000495540 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
PROM2-210ENST00000495540 CCNB3Q8WWL7 1395 aa21.6■■□□□ 1.05
PROM2-210ENST00000495540 IQGAP2Q13576 1575 aa21.57■■□□□ 1.04
PROM2-210ENST00000495540 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
PROM2-210ENST00000495540 ATP1B4Q9UN42 357 aaPredicted RBP21.55■■□□□ 1.04
PROM2-210ENST00000495540 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
PROM2-210ENST00000495540 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
PROM2-210ENST00000495540 UGGT2Q9NYU1 1516 aa21.5■■□□□ 1.03
PROM2-210ENST00000495540 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
PROM2-210ENST00000495540 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
PROM2-210ENST00000495540 PHLDB1Q86UU1 1377 aa21.45■■□□□ 1.02
PROM2-210ENST00000495540 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
PROM2-210ENST00000495540 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
PROM2-210ENST00000495540 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
PROM2-210ENST00000495540 HECW1Q76N89 1606 aa21.42■■□□□ 1.02
PROM2-210ENST00000495540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.42■■□□□ 1.02
PROM2-210ENST00000495540 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
PROM2-210ENST00000495540 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
PROM2-210ENST00000495540 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
PROM2-210ENST00000495540 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
PROM2-210ENST00000495540 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
PROM2-210ENST00000495540 SUPT6HQ7KZ85 1726 aaKnown RBP21.35■■□□□ 1.01
PROM2-210ENST00000495540 DHX57Q6P158 1386 aaKnown RBP21.35■■□□□ 1.01
PROM2-210ENST00000495540 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
PROM2-210ENST00000495540 DISP1Q96F81 1524 aa21.31■■□□□ 1
PROM2-210ENST00000495540 ITGAEP38570 1179 aa21.31■■□□□ 1
PROM2-210ENST00000495540 FGD6Q6ZV73 1430 aa21.3■■□□□ 1
PROM2-210ENST00000495540 CEP170Q5SW79 1584 aa21.3■■□□□ 1
PROM2-210ENST00000495540 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
PROM2-210ENST00000495540 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
PROM2-210ENST00000495540 NUP160Q12769 1436 aa21.29■■□□□ 1
PROM2-210ENST00000495540 NCOA2Q15596 1464 aa21.28■■□□□ 1
PROM2-210ENST00000495540 MYOM3Q5VTT5 1437 aa21.26■□□□□ 0.99
PROM2-210ENST00000495540 ARHGEF11O15085 1522 aa21.25■□□□□ 0.99
PROM2-210ENST00000495540 RAB3GAP2Q9H2M9 1393 aa21.24■□□□□ 0.99
PROM2-210ENST00000495540 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
PROM2-210ENST00000495540 FBLN2P98095 1184 aa21.22■□□□□ 0.99
PROM2-210ENST00000495540 RAPGEF6Q8TEU7 1601 aa21.22■□□□□ 0.99
PROM2-210ENST00000495540 MAGI3Q5TCQ9 1506 aa21.21■□□□□ 0.99
PROM2-210ENST00000495540 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
PROM2-210ENST00000495540 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
PROM2-210ENST00000495540 CDK13Q14004 1512 aaKnown RBP21.17■□□□□ 0.98
PROM2-210ENST00000495540 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
PROM2-210ENST00000495540 TCOF1Q13428 1488 aaKnown RBP21.14■□□□□ 0.98
PROM2-210ENST00000495540 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.97
PROM2-210ENST00000495540 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
PROM2-210ENST00000495540 MIA2Q96PC5 1412 aa21.13■□□□□ 0.97
PROM2-210ENST00000495540 HFM1A2PYH4 1435 aa21.06■□□□□ 0.96
PROM2-210ENST00000495540 DIEXFQ68CQ4 756 aaKnown RBP21.05■□□□□ 0.96
PROM2-210ENST00000495540 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
PROM2-210ENST00000495540 CHD1O14646 1710 aa21.04■□□□□ 0.96
PROM2-210ENST00000495540 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
PROM2-210ENST00000495540 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
PROM2-210ENST00000495540 ABCA8O94911 1581 aa21.02■□□□□ 0.96
PROM2-210ENST00000495540 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
PROM2-210ENST00000495540 ARID3CA6NKF2 412 aa21■□□□□ 0.95
PROM2-210ENST00000495540 AKNAQ7Z591 1439 aa21■□□□□ 0.95
PROM2-210ENST00000495540 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
PROM2-210ENST00000495540 NAIPQ13075 1403 aa20.98■□□□□ 0.95
PROM2-210ENST00000495540 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
PROM2-210ENST00000495540 TIMELESSQ9UNS1 1208 aa20.96■□□□□ 0.95
PROM2-210ENST00000495540 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
PROM2-210ENST00000495540 UACAQ9BZF9 1416 aa20.95■□□□□ 0.95
PROM2-210ENST00000495540 GCC2Q8IWJ2 1684 aa20.95■□□□□ 0.94
PROM2-210ENST00000495540 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
PROM2-210ENST00000495540 SHROOM2Q13796 1616 aa20.94■□□□□ 0.94
PROM2-210ENST00000495540 PTPRGP23470 1445 aa20.93■□□□□ 0.94
PROM2-210ENST00000495540 PLEKHD1A6NEE1 506 aa20.9■□□□□ 0.94
PROM2-210ENST00000495540 DNMT1P26358 1616 aaKnown RBP20.89■□□□□ 0.94
PROM2-210ENST00000495540 ATP10BO94823 1461 aa20.89■□□□□ 0.94
PROM2-210ENST00000495540 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
PROM2-210ENST00000495540 DAPK1P53355 1430 aa20.87■□□□□ 0.93
PROM2-210ENST00000495540 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
PROM2-210ENST00000495540 KIF14Q15058 1648 aa20.85■□□□□ 0.93
PROM2-210ENST00000495540 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
PROM2-210ENST00000495540 CHIC2Q9UKJ5 165 aa20.84■□□□□ 0.93
PROM2-210ENST00000495540 ABCC5O15440 1437 aa20.84■□□□□ 0.93
PROM2-210ENST00000495540 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms