RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CEP162Q5TB80 1403 aa25.18■■□□□ 1.62
PHF1-211ENST00000495509 CTTNBP2Q8WZ74 1663 aa25.17■■□□□ 1.62
PHF1-211ENST00000495509 CEP170Q5SW79 1584 aa25.15■■□□□ 1.62
PHF1-211ENST00000495509 NUP160Q12769 1436 aa25.12■■□□□ 1.61
PHF1-211ENST00000495509 CLIP1P30622 1438 aa25.1■■□□□ 1.61
PHF1-211ENST00000495509 KIAA0586Q9BVV6 1533 aa25.08■■□□□ 1.61
PHF1-211ENST00000495509 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
PHF1-211ENST00000495509 ARHGAP35Q9NRY4 1499 aa25■■□□□ 1.59
PHF1-211ENST00000495509 P3H3Q8IVL6 736 aa25■■□□□ 1.59
PHF1-211ENST00000495509 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
PHF1-211ENST00000495509 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
PHF1-211ENST00000495509 ARAP1Q96P48 1450 aa24.93■■□□□ 1.58
PHF1-211ENST00000495509 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
PHF1-211ENST00000495509 CLASP1Q7Z460 1538 aa24.9■■□□□ 1.58
PHF1-211ENST00000495509 SAMD9Q5K651 1589 aa24.89■■□□□ 1.58
PHF1-211ENST00000495509 EFCAB5A4FU69 1503 aa24.88■■□□□ 1.57
PHF1-211ENST00000495509 FHOD3Q2V2M9 1422 aa24.88■■□□□ 1.57
PHF1-211ENST00000495509 DISP1Q96F81 1524 aa24.87■■□□□ 1.57
PHF1-211ENST00000495509 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
PHF1-211ENST00000495509 SHROOM2Q13796 1616 aa24.82■■□□□ 1.56
PHF1-211ENST00000495509 KIAA0556O60303 1618 aa24.8■■□□□ 1.56
PHF1-211ENST00000495509 VPS8Q8N3P4 1428 aa24.79■■□□□ 1.56
PHF1-211ENST00000495509 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
PHF1-211ENST00000495509 CARMIL2Q6F5E8 1435 aa24.77■■□□□ 1.56
PHF1-211ENST00000495509 ERCC6L2Q5T890 1561 aa24.75■■□□□ 1.55
PHF1-211ENST00000495509 FMN1Q68DA7 1419 aa24.69■■□□□ 1.54
PHF1-211ENST00000495509 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
PHF1-211ENST00000495509 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
PHF1-211ENST00000495509 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
PHF1-211ENST00000495509 PTPRGP23470 1445 aa24.62■■□□□ 1.53
PHF1-211ENST00000495509 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
PHF1-211ENST00000495509 PLB1Q6P1J6 1458 aa24.57■■□□□ 1.52
PHF1-211ENST00000495509 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
PHF1-211ENST00000495509 APLP2Q06481 763 aa24.54■■□□□ 1.52
PHF1-211ENST00000495509 ARID3CA6NKF2 412 aa24.52■■□□□ 1.52
PHF1-211ENST00000495509 RAPGEF6Q8TEU7 1601 aa24.51■■□□□ 1.51
PHF1-211ENST00000495509 LRRIQ1Q96JM4 1722 aa24.51■■□□□ 1.51
PHF1-211ENST00000495509 ABCA8O94911 1581 aa24.49■■□□□ 1.51
PHF1-211ENST00000495509 ARHGEF11O15085 1522 aa24.48■■□□□ 1.51
PHF1-211ENST00000495509 KANK4Q5T7N3 995 aaPredicted RBP24.48■■□□□ 1.51
PHF1-211ENST00000495509 NUP153P49790 1475 aaKnown RBP24.47■■□□□ 1.51
PHF1-211ENST00000495509 HECW1Q76N89 1606 aa24.46■■□□□ 1.51
PHF1-211ENST00000495509 UACAQ9BZF9 1416 aa24.45■■□□□ 1.5
PHF1-211ENST00000495509 EPRSP07814 1512 aaKnown RBP24.43■■□□□ 1.5
PHF1-211ENST00000495509 TIAM1Q13009 1591 aa24.43■■□□□ 1.5
PHF1-211ENST00000495509 CDK13Q14004 1512 aaKnown RBP24.42■■□□□ 1.5
PHF1-211ENST00000495509 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
PHF1-211ENST00000495509 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
PHF1-211ENST00000495509 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
PHF1-211ENST00000495509 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
PHF1-211ENST00000495509 CFAP43Q8NDM7 1665 aa24.38■■□□□ 1.49
PHF1-211ENST00000495509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.38■■□□□ 1.49
PHF1-211ENST00000495509 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
PHF1-211ENST00000495509 CCDC18Q5T9S5 1454 aa24.36■■□□□ 1.49
PHF1-211ENST00000495509 ABCC2Q92887 1545 aa24.36■■□□□ 1.49
PHF1-211ENST00000495509 ATP10BO94823 1461 aa24.35■■□□□ 1.49
PHF1-211ENST00000495509 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
PHF1-211ENST00000495509 CYB5RLQ6IPT4 315 aa24.34■■□□□ 1.49
PHF1-211ENST00000495509 UHRF1BP1LA0JNW5 1464 aa24.33■■□□□ 1.48
PHF1-211ENST00000495509 ADCY10Q96PN6 1610 aa24.31■■□□□ 1.48
PHF1-211ENST00000495509 MAGI3Q5TCQ9 1506 aa24.3■■□□□ 1.48
PHF1-211ENST00000495509 MTUS2Q5JR59 1369 aa24.28■■□□□ 1.48
PHF1-211ENST00000495509 CDK11AQ9UQ88 783 aaPredicted RBP24.24■■□□□ 1.47
PHF1-211ENST00000495509 KDM5BQ9UGL1 1544 aa24.24■■□□□ 1.47
PHF1-211ENST00000495509 ZCCHC11Q5TAX3 1644 aaKnown RBP24.22■■□□□ 1.47
PHF1-211ENST00000495509 PLEKHD1A6NEE1 506 aa24.21■■□□□ 1.47
PHF1-211ENST00000495509 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
PHF1-211ENST00000495509 TROQ12816 1431 aaPredicted RBP24.17■■□□□ 1.46
PHF1-211ENST00000495509 NPM1P06748 294 aaKnown RBP eCLIP24.14■■□□□ 1.46
PHF1-211ENST00000495509 DNAJC5Q9H3Z4 198 aa24.14■■□□□ 1.46
PHF1-211ENST00000495509 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
PHF1-211ENST00000495509 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
PHF1-211ENST00000495509 NCOA2Q15596 1464 aa24.12■■□□□ 1.45
PHF1-211ENST00000495509 SUPT6HQ7KZ85 1726 aaKnown RBP24.12■■□□□ 1.45
PHF1-211ENST00000495509 KCNH8Q96L42 1107 aa24.1■■□□□ 1.45
PHF1-211ENST00000495509 KIF14Q15058 1648 aa24.09■■□□□ 1.45
PHF1-211ENST00000495509 ASXL2Q76L83 1435 aa24.06■■□□□ 1.44
PHF1-211ENST00000495509 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
PHF1-211ENST00000495509 WDR7Q9Y4E6 1490 aa24.02■■□□□ 1.44
PHF1-211ENST00000495509 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
PHF1-211ENST00000495509 MYOM3Q5VTT5 1437 aa23.99■■□□□ 1.43
PHF1-211ENST00000495509 CCNB3Q8WWL7 1395 aa23.99■■□□□ 1.43
PHF1-211ENST00000495509 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
PHF1-211ENST00000495509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.435e-7■□□□□ 8.9
PHF1-211ENST00000495509 GPATCH8Q9UKJ3 1502 aaKnown RBP23.95■■□□□ 1.42
PHF1-211ENST00000495509 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
PHF1-211ENST00000495509 TTC37Q6PGP7 1564 aa23.94■■□□□ 1.42
PHF1-211ENST00000495509 MAPKBP1O60336 1514 aa23.93■■□□□ 1.42
PHF1-211ENST00000495509 FAM50AQ14320 339 aaKnown RBP23.92■■□□□ 1.42
PHF1-211ENST00000495509 CDC42BPAQ5VT25 1732 aa23.91■■□□□ 1.42
PHF1-211ENST00000495509 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
PHF1-211ENST00000495509 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
PHF1-211ENST00000495509 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
PHF1-211ENST00000495509 ZNF777Q9ULD5 760 aaPredicted RBP23.86■■□□□ 1.41
PHF1-211ENST00000495509 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
PHF1-211ENST00000495509 ITSN2Q9NZM3 1697 aa23.86■■□□□ 1.41
PHF1-211ENST00000495509 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
PHF1-211ENST00000495509 ITGAEP38570 1179 aa23.84■■□□□ 1.41
PHF1-211ENST00000495509 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
PHF1-211ENST00000495509 PREX2Q70Z35 1606 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms