RNA–Protein interactions for RNA: ENST00000495123.5

PKP4-216, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-216ENST00000495123 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
PKP4-216ENST00000495123 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
PKP4-216ENST00000495123 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
PKP4-216ENST00000495123 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
PKP4-216ENST00000495123 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
PKP4-216ENST00000495123 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
PKP4-216ENST00000495123 EEA1Q15075 1411 aa14.49□□□□□ -0.09
PKP4-216ENST00000495123 FAM9AQ8IZU1 332 aaPredicted RBP14.48□□□□□ -0.09
PKP4-216ENST00000495123 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
PKP4-216ENST00000495123 SHROOM2Q13796 1616 aa14.47□□□□□ -0.09
PKP4-216ENST00000495123 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
PKP4-216ENST00000495123 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.09
PKP4-216ENST00000495123 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
PKP4-216ENST00000495123 JPH4Q96JJ6 628 aa14.45□□□□□ -0.1
PKP4-216ENST00000495123 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
PKP4-216ENST00000495123 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
PKP4-216ENST00000495123 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
PKP4-216ENST00000495123 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
PKP4-216ENST00000495123 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
PKP4-216ENST00000495123 KIF21BO75037 1637 aa14.34□□□□□ -0.11
PKP4-216ENST00000495123 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
PKP4-216ENST00000495123 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
PKP4-216ENST00000495123 EHMT2Q96KQ7 1210 aa14.31□□□□□ -0.12
PKP4-216ENST00000495123 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
PKP4-216ENST00000495123 KIAA0556O60303 1618 aa14.27□□□□□ -0.12
PKP4-216ENST00000495123 GOLGA3Q08378 1498 aa14.27□□□□□ -0.12
PKP4-216ENST00000495123 TNIKQ9UKE5 1360 aa14.26□□□□□ -0.13
PKP4-216ENST00000495123 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
PKP4-216ENST00000495123 PTPRGP23470 1445 aa14.24□□□□□ -0.13
PKP4-216ENST00000495123 UBTFP17480 764 aaKnown RBP14.23□□□□□ -0.13
PKP4-216ENST00000495123 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
PKP4-216ENST00000495123 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
PKP4-216ENST00000495123 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
PKP4-216ENST00000495123 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
PKP4-216ENST00000495123 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
PKP4-216ENST00000495123 PLB1Q6P1J6 1458 aa14.14□□□□□ -0.15
PKP4-216ENST00000495123 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
PKP4-216ENST00000495123 UHRF1BP1LA0JNW5 1464 aa14.13□□□□□ -0.15
PKP4-216ENST00000495123 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
PKP4-216ENST00000495123 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
PKP4-216ENST00000495123 ABCA8O94911 1581 aa14.11□□□□□ -0.15
PKP4-216ENST00000495123 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
PKP4-216ENST00000495123 TRHP20396 242 aaPredicted RBP14.1□□□□□ -0.15
PKP4-216ENST00000495123 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
PKP4-216ENST00000495123 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
PKP4-216ENST00000495123 KDM5BQ9UGL1 1544 aa14.07□□□□□ -0.16
PKP4-216ENST00000495123 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
PKP4-216ENST00000495123 ZCCHC11Q5TAX3 1644 aaKnown RBP14.05□□□□□ -0.16
PKP4-216ENST00000495123 RAPGEF6Q8TEU7 1601 aa14.04□□□□□ -0.16
PKP4-216ENST00000495123 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
PKP4-216ENST00000495123 CLIP1P30622 1438 aa14.02□□□□□ -0.16
PKP4-216ENST00000495123 ASXL2Q76L83 1435 aa14.02□□□□□ -0.16
PKP4-216ENST00000495123 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
PKP4-216ENST00000495123 ATP10BO94823 1461 aa14□□□□□ -0.17
PKP4-216ENST00000495123 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
PKP4-216ENST00000495123 DIP2BQ9P265 1576 aa14□□□□□ -0.17
PKP4-216ENST00000495123 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
PKP4-216ENST00000495123 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
PKP4-216ENST00000495123 FAM69CQ0P6D2 419 aa13.98□□□□□ -0.17
PKP4-216ENST00000495123 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
PKP4-216ENST00000495123 WDR7Q9Y4E6 1490 aa13.96□□□□□ -0.17
PKP4-216ENST00000495123 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
PKP4-216ENST00000495123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
PKP4-216ENST00000495123 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
PKP4-216ENST00000495123 ATP1B4Q9UN42 357 aaPredicted RBP13.93□□□□□ -0.18
PKP4-216ENST00000495123 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
PKP4-216ENST00000495123 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
PKP4-216ENST00000495123 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
PKP4-216ENST00000495123 MSH5O43196 834 aa13.92□□□□□ -0.18
PKP4-216ENST00000495123 GLI2P10070 1586 aa13.92□□□□□ -0.18
PKP4-216ENST00000495123 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
PKP4-216ENST00000495123 CASKIN1Q8WXD9 1431 aa13.9□□□□□ -0.19
PKP4-216ENST00000495123 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
PKP4-216ENST00000495123 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
PKP4-216ENST00000495123 MAP3K4Q9Y6R4 1608 aa13.86□□□□□ -0.19
PKP4-216ENST00000495123 PLEKHD1A6NEE1 506 aa13.86□□□□□ -0.19
PKP4-216ENST00000495123 TSPOAP1O95153 1857 aa13.86□□□□□ -0.19
PKP4-216ENST00000495123 PPRC1Q5VV67 1664 aaKnown RBP13.85□□□□□ -0.19
PKP4-216ENST00000495123 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
PKP4-216ENST00000495123 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
PKP4-216ENST00000495123 CCDC18Q5T9S5 1454 aa13.82□□□□□ -0.2
PKP4-216ENST00000495123 ABCA9Q8IUA7 1624 aa13.81□□□□□ -0.2
PKP4-216ENST00000495123 VPS8Q8N3P4 1428 aa13.81□□□□□ -0.2
PKP4-216ENST00000495123 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
PKP4-216ENST00000495123 PPP4R3CPQ6ZMV5 832 aa13.8□□□□□ -0.2
PKP4-216ENST00000495123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.2
PKP4-216ENST00000495123 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
PKP4-216ENST00000495123 TROQ12816 1431 aaPredicted RBP13.79□□□□□ -0.2
PKP4-216ENST00000495123 KIF14Q15058 1648 aa13.77□□□□□ -0.21
PKP4-216ENST00000495123 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
PKP4-216ENST00000495123 TEX14Q8IWB6 1497 aa13.77□□□□□ -0.21
PKP4-216ENST00000495123 KDM6BO15054 1643 aa13.75□□□□□ -0.21
PKP4-216ENST00000495123 COL17A1Q9UMD9 1497 aaPredicted RBP13.74□□□□□ -0.21
PKP4-216ENST00000495123 KCNA4P22459 653 aa13.73□□□□□ -0.21
PKP4-216ENST00000495123 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
PKP4-216ENST00000495123 PLCH2O75038 1416 aa13.7□□□□□ -0.22
PKP4-216ENST00000495123 TIAM1Q13009 1591 aa13.7□□□□□ -0.22
PKP4-216ENST00000495123 FANCAO15360 1455 aa13.68□□□□□ -0.22
PKP4-216ENST00000495123 NEO1Q92859 1461 aa13.68□□□□□ -0.22
PKP4-216ENST00000495123 EHBP1L1Q8N3D4 1523 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms