RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 ERCC6L2Q5T890 1561 aa24.25■■□□□ 1.47
SCAP-213ENST00000494938 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
SCAP-213ENST00000494938 PRG4Q92954 1404 aaPredicted RBP24.23■■□□□ 1.47
SCAP-213ENST00000494938 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
SCAP-213ENST00000494938 RAPGEF2Q9Y4G8 1499 aa24.2■■□□□ 1.47
SCAP-213ENST00000494938 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
SCAP-213ENST00000494938 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
SCAP-213ENST00000494938 FAM9AQ8IZU1 332 aaPredicted RBP24.06■■□□□ 1.44
SCAP-213ENST00000494938 EEA1Q15075 1411 aa24.04■■□□□ 1.44
SCAP-213ENST00000494938 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
SCAP-213ENST00000494938 CARMIL2Q6F5E8 1435 aa23.96■■□□□ 1.43
SCAP-213ENST00000494938 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
SCAP-213ENST00000494938 PTPRGP23470 1445 aa23.95■■□□□ 1.42
SCAP-213ENST00000494938 DISP1Q96F81 1524 aa23.94■■□□□ 1.42
SCAP-213ENST00000494938 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
SCAP-213ENST00000494938 UGGT2Q9NYU1 1516 aa23.93■■□□□ 1.42
SCAP-213ENST00000494938 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
SCAP-213ENST00000494938 NPM1P06748 294 aaKnown RBP eCLIP23.84■■□□□ 1.41
SCAP-213ENST00000494938 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
SCAP-213ENST00000494938 GOLGA3Q08378 1498 aa23.76■■□□□ 1.39
SCAP-213ENST00000494938 P3H3Q8IVL6 736 aa23.76■■□□□ 1.39
SCAP-213ENST00000494938 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
SCAP-213ENST00000494938 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
SCAP-213ENST00000494938 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
SCAP-213ENST00000494938 CTTNBP2Q8WZ74 1663 aa23.75■■□□□ 1.39
SCAP-213ENST00000494938 UHRF1BP1LA0JNW5 1464 aa23.73■■□□□ 1.39
SCAP-213ENST00000494938 KIF21BO75037 1637 aa23.72■■□□□ 1.39
SCAP-213ENST00000494938 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
SCAP-213ENST00000494938 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
SCAP-213ENST00000494938 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
SCAP-213ENST00000494938 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
SCAP-213ENST00000494938 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
SCAP-213ENST00000494938 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
SCAP-213ENST00000494938 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
SCAP-213ENST00000494938 KDM5BQ9UGL1 1544 aa23.6■■□□□ 1.37
SCAP-213ENST00000494938 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
SCAP-213ENST00000494938 ASXL2Q76L83 1435 aa23.58■■□□□ 1.36
SCAP-213ENST00000494938 ABCA8O94911 1581 aa23.57■■□□□ 1.36
SCAP-213ENST00000494938 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
SCAP-213ENST00000494938 DIP2BQ9P265 1576 aa23.48■■□□□ 1.35
SCAP-213ENST00000494938 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
SCAP-213ENST00000494938 ATP10BO94823 1461 aa23.47■■□□□ 1.35
SCAP-213ENST00000494938 KIF13AQ9H1H9 1805 aa23.45■■□□□ 1.34
SCAP-213ENST00000494938 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
SCAP-213ENST00000494938 ZCCHC11Q5TAX3 1644 aaKnown RBP23.44■■□□□ 1.34
SCAP-213ENST00000494938 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
SCAP-213ENST00000494938 EPRSP07814 1512 aaKnown RBP23.42■■□□□ 1.34
SCAP-213ENST00000494938 KCNH8Q96L42 1107 aa23.41■■□□□ 1.34
SCAP-213ENST00000494938 WDR7Q9Y4E6 1490 aa23.39■■□□□ 1.34
SCAP-213ENST00000494938 GLI2P10070 1586 aa23.38■■□□□ 1.33
SCAP-213ENST00000494938 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
SCAP-213ENST00000494938 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
SCAP-213ENST00000494938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
SCAP-213ENST00000494938 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
SCAP-213ENST00000494938 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
SCAP-213ENST00000494938 FMN1Q68DA7 1419 aa23.31■■□□□ 1.32
SCAP-213ENST00000494938 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
SCAP-213ENST00000494938 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
SCAP-213ENST00000494938 CLIP1P30622 1438 aa23.25■■□□□ 1.31
SCAP-213ENST00000494938 CD109Q6YHK3 1445 aa23.25■■□□□ 1.31
SCAP-213ENST00000494938 MAP3K4Q9Y6R4 1608 aa23.21■■□□□ 1.31
SCAP-213ENST00000494938 TSPOAP1O95153 1857 aa23.19■■□□□ 1.3
SCAP-213ENST00000494938 PPRC1Q5VV67 1664 aaKnown RBP23.19■■□□□ 1.3
SCAP-213ENST00000494938 MAGI3Q5TCQ9 1506 aa23.18■■□□□ 1.3
SCAP-213ENST00000494938 CDK13Q14004 1512 aaKnown RBP23.17■■□□□ 1.3
SCAP-213ENST00000494938 COL17A1Q9UMD9 1497 aaPredicted RBP23.17■■□□□ 1.3
SCAP-213ENST00000494938 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
SCAP-213ENST00000494938 CASKIN1Q8WXD9 1431 aa23.16■■□□□ 1.3
SCAP-213ENST00000494938 CDK11AQ9UQ88 783 aaPredicted RBP23.13■■□□□ 1.29
SCAP-213ENST00000494938 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
SCAP-213ENST00000494938 KDM6BO15054 1643 aa23.1■■□□□ 1.29
SCAP-213ENST00000494938 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
SCAP-213ENST00000494938 CFAP43Q8NDM7 1665 aa23.09■■□□□ 1.29
SCAP-213ENST00000494938 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.28
SCAP-213ENST00000494938 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
SCAP-213ENST00000494938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
SCAP-213ENST00000494938 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
SCAP-213ENST00000494938 TROQ12816 1431 aaPredicted RBP23.02■■□□□ 1.28
SCAP-213ENST00000494938 FYCO1Q9BQS8 1478 aa23.02■■□□□ 1.28
SCAP-213ENST00000494938 CCDC18Q5T9S5 1454 aa22.98■■□□□ 1.27
SCAP-213ENST00000494938 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
SCAP-213ENST00000494938 NEO1Q92859 1461 aa22.97■■□□□ 1.27
SCAP-213ENST00000494938 RAPGEF3O95398 923 aa22.96■■□□□ 1.27
SCAP-213ENST00000494938 PLCH2O75038 1416 aa22.96■■□□□ 1.27
SCAP-213ENST00000494938 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
SCAP-213ENST00000494938 TTC37Q6PGP7 1564 aa22.93■■□□□ 1.26
SCAP-213ENST00000494938 AKNAQ7Z591 1439 aa22.92■■□□□ 1.26
SCAP-213ENST00000494938 FANCAO15360 1455 aa22.91■■□□□ 1.26
SCAP-213ENST00000494938 EFCAB2Q5VUJ9 269 aa22.9■■□□□ 1.26
SCAP-213ENST00000494938 KIF14Q15058 1648 aa22.89■■□□□ 1.25
SCAP-213ENST00000494938 KDM4FA0A1W2PPD8 638 aa22.86■■□□□ 1.25
SCAP-213ENST00000494938 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
SCAP-213ENST00000494938 DENND4BO75064 1496 aaPredicted RBP22.83■■□□□ 1.25
SCAP-213ENST00000494938 MTUS2Q5JR59 1369 aa22.81■■□□□ 1.24
SCAP-213ENST00000494938 SCAPERQ9BY12 1400 aa22.81■■□□□ 1.24
SCAP-213ENST00000494938 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
SCAP-213ENST00000494938 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
SCAP-213ENST00000494938 GPATCH8Q9UKJ3 1502 aaKnown RBP22.76■■□□□ 1.23
SCAP-213ENST00000494938 ARHGAP5Q13017 1502 aa22.75■■□□□ 1.23
SCAP-213ENST00000494938 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms