RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 PRG4Q92954 1404 aaPredicted RBP30.64■■■□□ 2.49
COL20A1-207ENST00000494913 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
COL20A1-207ENST00000494913 KIAA0586Q9BVV6 1533 aa30.58■■■□□ 2.49
COL20A1-207ENST00000494913 TRHP20396 242 aaPredicted RBP30.57■■■□□ 2.48
COL20A1-207ENST00000494913 RAPGEF2Q9Y4G8 1499 aa30.46■■■□□ 2.47
COL20A1-207ENST00000494913 IQGAP2Q13576 1575 aa30.33■■■□□ 2.45
COL20A1-207ENST00000494913 CARMIL2Q6F5E8 1435 aa30.28■■■□□ 2.44
COL20A1-207ENST00000494913 TTBK1Q5TCY1 1321 aaPredicted RBP30.26■■■□□ 2.43
COL20A1-207ENST00000494913 PRXQ9BXM0 1461 aa30.25■■■□□ 2.43
COL20A1-207ENST00000494913 PTPRGP23470 1445 aa30.23■■■□□ 2.43
COL20A1-207ENST00000494913 CSRNP3Q8WYN3 585 aa30.23■■■□□ 2.43
COL20A1-207ENST00000494913 NPM1P06748 294 aaKnown RBP eCLIP30.21■■■□□ 2.43
COL20A1-207ENST00000494913 TNIKQ9UKE5 1360 aa30.2■■■□□ 2.43
COL20A1-207ENST00000494913 DISP1Q96F81 1524 aa30.17■■■□□ 2.42
COL20A1-207ENST00000494913 UGGT2Q9NYU1 1516 aa30.16■■■□□ 2.42
COL20A1-207ENST00000494913 ADCY10Q96PN6 1610 aa30.15■■■□□ 2.42
COL20A1-207ENST00000494913 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
COL20A1-207ENST00000494913 EEA1Q15075 1411 aa30.12■■■□□ 2.41
COL20A1-207ENST00000494913 FAM9AQ8IZU1 332 aaPredicted RBP30.12■■■□□ 2.41
COL20A1-207ENST00000494913 CTTNBP2Q8WZ74 1663 aa30.11■■■□□ 2.41
COL20A1-207ENST00000494913 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
COL20A1-207ENST00000494913 MAPKBP1O60336 1514 aa30.01■■■□□ 2.39
COL20A1-207ENST00000494913 UACAQ9BZF9 1416 aa29.99■■■□□ 2.39
COL20A1-207ENST00000494913 GOLGA3Q08378 1498 aa29.99■■■□□ 2.39
COL20A1-207ENST00000494913 FAM69CQ0P6D2 419 aa29.98■■■□□ 2.39
COL20A1-207ENST00000494913 ABCC2Q92887 1545 aa29.96■■■□□ 2.39
COL20A1-207ENST00000494913 UHRF1BP1LA0JNW5 1464 aa29.96■■■□□ 2.39
COL20A1-207ENST00000494913 KIF13AQ9H1H9 1805 aa29.95■■■□□ 2.39
COL20A1-207ENST00000494913 ABCC10Q5T3U5 1492 aa29.95■■■□□ 2.38
COL20A1-207ENST00000494913 P3H3Q8IVL6 736 aa29.87■■■□□ 2.37
COL20A1-207ENST00000494913 DIP2BQ9P265 1576 aa29.85■■■□□ 2.37
COL20A1-207ENST00000494913 PLB1Q6P1J6 1458 aa29.84■■■□□ 2.37
COL20A1-207ENST00000494913 ASXL2Q76L83 1435 aa29.83■■■□□ 2.37
COL20A1-207ENST00000494913 KDM5BQ9UGL1 1544 aa29.82■■■□□ 2.36
COL20A1-207ENST00000494913 RANGAP1P46060 587 aaPredicted RBP29.81■■■□□ 2.36
COL20A1-207ENST00000494913 KIF21BO75037 1637 aa29.81■■■□□ 2.36
COL20A1-207ENST00000494913 EHMT2Q96KQ7 1210 aa29.79■■■□□ 2.36
COL20A1-207ENST00000494913 ZCCHC11Q5TAX3 1644 aaKnown RBP29.74■■■□□ 2.35
COL20A1-207ENST00000494913 ABCA8O94911 1581 aa29.74■■■□□ 2.35
COL20A1-207ENST00000494913 SAMD9Q5K651 1589 aa29.73■■■□□ 2.35
COL20A1-207ENST00000494913 UBTFP17480 764 aaKnown RBP29.7■■■□□ 2.35
COL20A1-207ENST00000494913 TSPOAP1O95153 1857 aa29.66■■■□□ 2.34
COL20A1-207ENST00000494913 GLI2P10070 1586 aa29.63■■■□□ 2.33
COL20A1-207ENST00000494913 ARID3CA6NKF2 412 aa29.63■■■□□ 2.33
COL20A1-207ENST00000494913 EPRSP07814 1512 aaKnown RBP29.63■■■□□ 2.33
COL20A1-207ENST00000494913 FHOD3Q2V2M9 1422 aa29.61■■■□□ 2.33
COL20A1-207ENST00000494913 WDR7Q9Y4E6 1490 aa29.6■■■□□ 2.33
COL20A1-207ENST00000494913 KCNH8Q96L42 1107 aa29.57■■■□□ 2.32
COL20A1-207ENST00000494913 ATP10BO94823 1461 aa29.54■■■□□ 2.32
COL20A1-207ENST00000494913 EFCAB5A4FU69 1503 aa29.54■■■□□ 2.32
COL20A1-207ENST00000494913 RAPGEF6Q8TEU7 1601 aa29.52■■■□□ 2.32
COL20A1-207ENST00000494913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.48■■■□□ 2.31
COL20A1-207ENST00000494913 HNRNPUL2Q1KMD3 747 aaKnown RBP29.48■■■□□ 2.31
COL20A1-207ENST00000494913 PPRC1Q5VV67 1664 aaKnown RBP29.48■■■□□ 2.31
COL20A1-207ENST00000494913 KDM6BO15054 1643 aa29.48■■■□□ 2.31
COL20A1-207ENST00000494913 MAP3K4Q9Y6R4 1608 aa29.48■■■□□ 2.31
COL20A1-207ENST00000494913 NUP153P49790 1475 aaKnown RBP29.44■■■□□ 2.3
COL20A1-207ENST00000494913 CD109Q6YHK3 1445 aa29.41■■■□□ 2.3
COL20A1-207ENST00000494913 TEX14Q8IWB6 1497 aa29.39■■■□□ 2.3
COL20A1-207ENST00000494913 ARHGAP35Q9NRY4 1499 aa29.39■■■□□ 2.29
COL20A1-207ENST00000494913 CFAP43Q8NDM7 1665 aa29.35■■■□□ 2.29
COL20A1-207ENST00000494913 MAGI3Q5TCQ9 1506 aa29.31■■■□□ 2.28
COL20A1-207ENST00000494913 FMN1Q68DA7 1419 aa29.31■■■□□ 2.28
COL20A1-207ENST00000494913 PLEKHD1A6NEE1 506 aa29.31■■■□□ 2.28
COL20A1-207ENST00000494913 ATP1B4Q9UN42 357 aaPredicted RBP29.31■■■□□ 2.28
COL20A1-207ENST00000494913 COL17A1Q9UMD9 1497 aaPredicted RBP29.31■■■□□ 2.28
COL20A1-207ENST00000494913 AEBP2Q6ZN18 517 aaPredicted RBP29.25■■■□□ 2.27
COL20A1-207ENST00000494913 ABCA9Q8IUA7 1624 aa29.22■■■□□ 2.27
COL20A1-207ENST00000494913 CDK13Q14004 1512 aaKnown RBP29.21■■■□□ 2.27
COL20A1-207ENST00000494913 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
COL20A1-207ENST00000494913 CLIP1P30622 1438 aa29.13■■■□□ 2.25
COL20A1-207ENST00000494913 CDK11AQ9UQ88 783 aaPredicted RBP29.1■■■□□ 2.25
COL20A1-207ENST00000494913 PHLDB1Q86UU1 1377 aa29.09■■■□□ 2.25
COL20A1-207ENST00000494913 ARAP3Q8WWN8 1544 aa29.07■■■□□ 2.24
COL20A1-207ENST00000494913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.07■■■□□ 2.24
COL20A1-207ENST00000494913 NEO1Q92859 1461 aa29.05■■■□□ 2.24
COL20A1-207ENST00000494913 CASKIN1Q8WXD9 1431 aa29.05■■■□□ 2.24
COL20A1-207ENST00000494913 KDM4FA0A1W2PPD8 638 aa29.04■■■□□ 2.24
COL20A1-207ENST00000494913 TTC37Q6PGP7 1564 aa29.01■■■□□ 2.23
COL20A1-207ENST00000494913 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.23
COL20A1-207ENST00000494913 RAPGEF3O95398 923 aa29■■■□□ 2.23
COL20A1-207ENST00000494913 LRRIQ1Q96JM4 1722 aa28.99■■■□□ 2.23
COL20A1-207ENST00000494913 TROQ12816 1431 aaPredicted RBP28.96■■■□□ 2.23
COL20A1-207ENST00000494913 FANCAO15360 1455 aa28.96■■■□□ 2.23
COL20A1-207ENST00000494913 LOC105371045A0A1W2PR82 267 aa28.96■■■□□ 2.23
COL20A1-207ENST00000494913 CCDC18Q5T9S5 1454 aa28.95■■■□□ 2.22
COL20A1-207ENST00000494913 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
COL20A1-207ENST00000494913 AKNAQ7Z591 1439 aa28.94■■■□□ 2.22
COL20A1-207ENST00000494913 PLCH2O75038 1416 aa28.92■■■□□ 2.22
COL20A1-207ENST00000494913 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
COL20A1-207ENST00000494913 KIF14Q15058 1648 aa28.91■■■□□ 2.22
COL20A1-207ENST00000494913 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
COL20A1-207ENST00000494913 CFAP74Q9C0B2 1584 aa28.88■■■□□ 2.21
COL20A1-207ENST00000494913 DENND4BO75064 1496 aaPredicted RBP28.87■■■□□ 2.21
COL20A1-207ENST00000494913 EFCAB2Q5VUJ9 269 aa28.85■■■□□ 2.21
COL20A1-207ENST00000494913 FRMPD1Q5SYB0 1578 aa28.84■■■□□ 2.21
COL20A1-207ENST00000494913 MYO5CQ9NQX4 1742 aa28.82■■■□□ 2.2
COL20A1-207ENST00000494913 SCAPERQ9BY12 1400 aa28.79■■■□□ 2.2
COL20A1-207ENST00000494913 RICTORQ6R327 1708 aa28.77■■■□□ 2.2
COL20A1-207ENST00000494913 ARHGAP5Q13017 1502 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms