RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ADAMTS12P58397 1594 aa16.46■□□□□ 0.23
PRPF4B-209ENST00000494674 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
PRPF4B-209ENST00000494674 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
PRPF4B-209ENST00000494674 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.224e-15■■■■■ 104.5
PRPF4B-209ENST00000494674 EFCAB5A4FU69 1503 aa16.44■□□□□ 0.22
PRPF4B-209ENST00000494674 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
PRPF4B-209ENST00000494674 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
PRPF4B-209ENST00000494674 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
PRPF4B-209ENST00000494674 SAMD9Q5K651 1589 aa16.4■□□□□ 0.22
PRPF4B-209ENST00000494674 FHAD1B1AJZ9 1412 aa16.39■□□□□ 0.21
PRPF4B-209ENST00000494674 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
PRPF4B-209ENST00000494674 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
PRPF4B-209ENST00000494674 APLP2Q06481 763 aa16.36■□□□□ 0.21
PRPF4B-209ENST00000494674 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
PRPF4B-209ENST00000494674 TIAM1Q13009 1591 aa16.35■□□□□ 0.21
PRPF4B-209ENST00000494674 FHOD3Q2V2M9 1422 aa16.33■□□□□ 0.21
PRPF4B-209ENST00000494674 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
PRPF4B-209ENST00000494674 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
PRPF4B-209ENST00000494674 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
PRPF4B-209ENST00000494674 FYCO1Q9BQS8 1478 aa16.29■□□□□ 0.2
PRPF4B-209ENST00000494674 CASKIN1Q8WXD9 1431 aa16.27■□□□□ 0.19
PRPF4B-209ENST00000494674 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
PRPF4B-209ENST00000494674 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
PRPF4B-209ENST00000494674 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
PRPF4B-209ENST00000494674 GRIN2AQ12879 1464 aa16.24■□□□□ 0.19
PRPF4B-209ENST00000494674 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
PRPF4B-209ENST00000494674 FMN1Q68DA7 1419 aa16.24■□□□□ 0.19
PRPF4B-209ENST00000494674 RRBP1Q9P2E9 1410 aaKnown RBP16.24■□□□□ 0.19
PRPF4B-209ENST00000494674 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
PRPF4B-209ENST00000494674 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
PRPF4B-209ENST00000494674 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
PRPF4B-209ENST00000494674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
PRPF4B-209ENST00000494674 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
PRPF4B-209ENST00000494674 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
PRPF4B-209ENST00000494674 KIAA0556O60303 1618 aa16.15■□□□□ 0.18
PRPF4B-209ENST00000494674 FOXD1Q16676 465 aa16.14■□□□□ 0.17
PRPF4B-209ENST00000494674 DISP1Q96F81 1524 aa16.14■□□□□ 0.17
PRPF4B-209ENST00000494674 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
PRPF4B-209ENST00000494674 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
PRPF4B-209ENST00000494674 NUP160Q12769 1436 aa16.12■□□□□ 0.17
PRPF4B-209ENST00000494674 PHLDB1Q86UU1 1377 aa16.11■□□□□ 0.17
PRPF4B-209ENST00000494674 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
PRPF4B-209ENST00000494674 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
PRPF4B-209ENST00000494674 MAGI3Q5TCQ9 1506 aa16.06■□□□□ 0.16
PRPF4B-209ENST00000494674 CCDC18Q5T9S5 1454 aa16.06■□□□□ 0.16
PRPF4B-209ENST00000494674 MSH5O43196 834 aa16.05■□□□□ 0.16
PRPF4B-209ENST00000494674 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
PRPF4B-209ENST00000494674 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
PRPF4B-209ENST00000494674 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
PRPF4B-209ENST00000494674 CHD1O14646 1710 aa16.04■□□□□ 0.16
PRPF4B-209ENST00000494674 EPRSP07814 1512 aaKnown RBP16.03■□□□□ 0.16
PRPF4B-209ENST00000494674 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
PRPF4B-209ENST00000494674 ARHGEF11O15085 1522 aa16.02■□□□□ 0.15
PRPF4B-209ENST00000494674 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
PRPF4B-209ENST00000494674 CDK13Q14004 1512 aaKnown RBP16■□□□□ 0.15
PRPF4B-209ENST00000494674 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
PRPF4B-209ENST00000494674 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
PRPF4B-209ENST00000494674 NUP153P49790 1475 aaKnown RBP15.97■□□□□ 0.15
PRPF4B-209ENST00000494674 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
PRPF4B-209ENST00000494674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
PRPF4B-209ENST00000494674 FBLN2P98095 1184 aa15.97■□□□□ 0.15
PRPF4B-209ENST00000494674 MYOM3Q5VTT5 1437 aa15.93■□□□□ 0.14
PRPF4B-209ENST00000494674 DHX57Q6P158 1386 aaKnown RBP15.92■□□□□ 0.14
PRPF4B-209ENST00000494674 SHROOM2Q13796 1616 aa15.92■□□□□ 0.14
PRPF4B-209ENST00000494674 JPH4Q96JJ6 628 aa15.91■□□□□ 0.14
PRPF4B-209ENST00000494674 CARMIL2Q6F5E8 1435 aa15.91■□□□□ 0.14
PRPF4B-209ENST00000494674 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
PRPF4B-209ENST00000494674 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
PRPF4B-209ENST00000494674 ABCA8O94911 1581 aa15.89■□□□□ 0.13
PRPF4B-209ENST00000494674 ITGAEP38570 1179 aa15.88■□□□□ 0.13
PRPF4B-209ENST00000494674 FAM50AQ14320 339 aaKnown RBP15.88■□□□□ 0.13
PRPF4B-209ENST00000494674 TCOF1Q13428 1488 aaKnown RBP15.87■□□□□ 0.13
PRPF4B-209ENST00000494674 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
PRPF4B-209ENST00000494674 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
PRPF4B-209ENST00000494674 ADCY10Q96PN6 1610 aa15.85■□□□□ 0.13
PRPF4B-209ENST00000494674 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
PRPF4B-209ENST00000494674 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
PRPF4B-209ENST00000494674 PRG4Q92954 1404 aaPredicted RBP15.83■□□□□ 0.13
PRPF4B-209ENST00000494674 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
PRPF4B-209ENST00000494674 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
PRPF4B-209ENST00000494674 MIA2Q96PC5 1412 aa15.81■□□□□ 0.12
PRPF4B-209ENST00000494674 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
PRPF4B-209ENST00000494674 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
PRPF4B-209ENST00000494674 KIF14Q15058 1648 aa15.79■□□□□ 0.12
PRPF4B-209ENST00000494674 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
PRPF4B-209ENST00000494674 HFM1A2PYH4 1435 aa15.77■□□□□ 0.11
PRPF4B-209ENST00000494674 GCC2Q8IWJ2 1684 aa15.76■□□□□ 0.11
PRPF4B-209ENST00000494674 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
PRPF4B-209ENST00000494674 ATP10BO94823 1461 aa15.76■□□□□ 0.11
PRPF4B-209ENST00000494674 PTPRGP23470 1445 aa15.74■□□□□ 0.11
PRPF4B-209ENST00000494674 DNMT1P26358 1616 aaKnown RBP15.73■□□□□ 0.11
PRPF4B-209ENST00000494674 NAIPQ13075 1403 aa15.73■□□□□ 0.11
PRPF4B-209ENST00000494674 CDC42BPAQ5VT25 1732 aa15.72■□□□□ 0.11
PRPF4B-209ENST00000494674 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
PRPF4B-209ENST00000494674 AKNAQ7Z591 1439 aa15.71■□□□□ 0.11
PRPF4B-209ENST00000494674 ABCC10Q5T3U5 1492 aa15.7■□□□□ 0.1
PRPF4B-209ENST00000494674 GPATCH8Q9UKJ3 1502 aaKnown RBP15.7■□□□□ 0.1
PRPF4B-209ENST00000494674 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
PRPF4B-209ENST00000494674 ABCC2Q92887 1545 aa15.67■□□□□ 0.1
PRPF4B-209ENST00000494674 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms