RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
SCRN1-209ENST00000494620 NPM1P06748 294 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCRN1-209ENST00000494620 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SCRN1-209ENST00000494620 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
SCRN1-209ENST00000494620 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
SCRN1-209ENST00000494620 CARMIL2Q6F5E8 1435 aa18.47■□□□□ 0.55
SCRN1-209ENST00000494620 RUSC2Q8N2Y8 1516 aa18.45■□□□□ 0.54
SCRN1-209ENST00000494620 TTBK1Q5TCY1 1321 aaPredicted RBP18.45■□□□□ 0.54
SCRN1-209ENST00000494620 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
SCRN1-209ENST00000494620 PTPRGP23470 1445 aa18.41■□□□□ 0.54
SCRN1-209ENST00000494620 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
SCRN1-209ENST00000494620 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
SCRN1-209ENST00000494620 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
SCRN1-209ENST00000494620 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
SCRN1-209ENST00000494620 EEA1Q15075 1411 aa18.32■□□□□ 0.52
SCRN1-209ENST00000494620 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
SCRN1-209ENST00000494620 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
SCRN1-209ENST00000494620 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
SCRN1-209ENST00000494620 UGGT2Q9NYU1 1516 aa18.25■□□□□ 0.51
SCRN1-209ENST00000494620 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
SCRN1-209ENST00000494620 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
SCRN1-209ENST00000494620 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
SCRN1-209ENST00000494620 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
SCRN1-209ENST00000494620 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
SCRN1-209ENST00000494620 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
SCRN1-209ENST00000494620 UHRF1BP1LA0JNW5 1464 aa18.18■□□□□ 0.5
SCRN1-209ENST00000494620 ABCC2Q92887 1545 aa18.18■□□□□ 0.5
SCRN1-209ENST00000494620 P3H3Q8IVL6 736 aa18.17■□□□□ 0.5
SCRN1-209ENST00000494620 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
SCRN1-209ENST00000494620 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.5
SCRN1-209ENST00000494620 KIAA0556O60303 1618 aa18.13■□□□□ 0.49
SCRN1-209ENST00000494620 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
SCRN1-209ENST00000494620 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
SCRN1-209ENST00000494620 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
SCRN1-209ENST00000494620 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
SCRN1-209ENST00000494620 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
SCRN1-209ENST00000494620 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
SCRN1-209ENST00000494620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
SCRN1-209ENST00000494620 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
SCRN1-209ENST00000494620 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
SCRN1-209ENST00000494620 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
SCRN1-209ENST00000494620 ARID3CA6NKF2 412 aa18■□□□□ 0.47
SCRN1-209ENST00000494620 KIF21BO75037 1637 aa17.98■□□□□ 0.47
SCRN1-209ENST00000494620 ABCA8O94911 1581 aa17.96■□□□□ 0.47
SCRN1-209ENST00000494620 WDR7Q9Y4E6 1490 aa17.96■□□□□ 0.47
SCRN1-209ENST00000494620 EPRSP07814 1512 aaKnown RBP17.96■□□□□ 0.47
SCRN1-209ENST00000494620 GLI2P10070 1586 aa17.96■□□□□ 0.46
SCRN1-209ENST00000494620 ZCCHC11Q5TAX3 1644 aaKnown RBP17.94■□□□□ 0.46
SCRN1-209ENST00000494620 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
SCRN1-209ENST00000494620 TEX14Q8IWB6 1497 aa17.92■□□□□ 0.46
SCRN1-209ENST00000494620 FHOD3Q2V2M9 1422 aa17.91■□□□□ 0.46
SCRN1-209ENST00000494620 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
SCRN1-209ENST00000494620 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
SCRN1-209ENST00000494620 ATP10BO94823 1461 aa17.9■□□□□ 0.46
SCRN1-209ENST00000494620 TSPOAP1O95153 1857 aa17.9■□□□□ 0.46
SCRN1-209ENST00000494620 CD109Q6YHK3 1445 aa17.89■□□□□ 0.46
SCRN1-209ENST00000494620 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
SCRN1-209ENST00000494620 KDM6BO15054 1643 aa17.87■□□□□ 0.45
SCRN1-209ENST00000494620 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
SCRN1-209ENST00000494620 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.45
SCRN1-209ENST00000494620 FMN1Q68DA7 1419 aa17.83■□□□□ 0.45
SCRN1-209ENST00000494620 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
SCRN1-209ENST00000494620 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
SCRN1-209ENST00000494620 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
SCRN1-209ENST00000494620 MAP3K4Q9Y6R4 1608 aa17.79■□□□□ 0.44
SCRN1-209ENST00000494620 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
SCRN1-209ENST00000494620 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
SCRN1-209ENST00000494620 CFAP43Q8NDM7 1665 aa17.74■□□□□ 0.43
SCRN1-209ENST00000494620 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
SCRN1-209ENST00000494620 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
SCRN1-209ENST00000494620 CLIP1P30622 1438 aa17.67■□□□□ 0.42
SCRN1-209ENST00000494620 NEO1Q92859 1461 aa17.66■□□□□ 0.42
SCRN1-209ENST00000494620 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
SCRN1-209ENST00000494620 RAPGEF3O95398 923 aa17.65■□□□□ 0.42
SCRN1-209ENST00000494620 ARAP3Q8WWN8 1544 aa17.64■□□□□ 0.41
SCRN1-209ENST00000494620 HECW1Q76N89 1606 aa17.64■□□□□ 0.41
SCRN1-209ENST00000494620 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
SCRN1-209ENST00000494620 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
SCRN1-209ENST00000494620 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
SCRN1-209ENST00000494620 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
SCRN1-209ENST00000494620 AKNAQ7Z591 1439 aa17.6■□□□□ 0.41
SCRN1-209ENST00000494620 TROQ12816 1431 aaPredicted RBP17.58■□□□□ 0.41
SCRN1-209ENST00000494620 FANCAO15360 1455 aa17.57■□□□□ 0.4
SCRN1-209ENST00000494620 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
SCRN1-209ENST00000494620 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
SCRN1-209ENST00000494620 PLCH2O75038 1416 aa17.57■□□□□ 0.4
SCRN1-209ENST00000494620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCRN1-209ENST00000494620 ARID4BQ4LE39 1312 aaPredicted RBP17.56■□□□□ 0.4
SCRN1-209ENST00000494620 ADGRL1O94910 1474 aa17.56■□□□□ 0.4
SCRN1-209ENST00000494620 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
SCRN1-209ENST00000494620 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
SCRN1-209ENST00000494620 FYCO1Q9BQS8 1478 aa17.51■□□□□ 0.39
SCRN1-209ENST00000494620 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
SCRN1-209ENST00000494620 CFAP74Q9C0B2 1584 aa17.49■□□□□ 0.39
SCRN1-209ENST00000494620 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
SCRN1-209ENST00000494620 KIF14Q15058 1648 aa17.47■□□□□ 0.39
SCRN1-209ENST00000494620 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
SCRN1-209ENST00000494620 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
SCRN1-209ENST00000494620 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
SCRN1-209ENST00000494620 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms