RNA–Protein interactions for RNA: ENST00000494208.5

SLC8A3-206, Transcript of solute carrier family 8 member A3, humanhuman

TSL 1 (best)

Gene SLC8A3, Length 5,146 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A3-206ENST00000494208 SLC24A1O60721 1099 aa20.17■□□□□ 0.82
SLC8A3-206ENST00000494208 CHIC2Q9UKJ5 165 aa20.14■□□□□ 0.82
SLC8A3-206ENST00000494208 UNC13AQ9UPW8 1703 aa20.14■□□□□ 0.82
SLC8A3-206ENST00000494208 ANP32BQ92688 251 aaKnown RBP20.13■□□□□ 0.81
SLC8A3-206ENST00000494208 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
SLC8A3-206ENST00000494208 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
SLC8A3-206ENST00000494208 EIF4G1Q04637 1599 aaKnown RBP20.09■□□□□ 0.81
SLC8A3-206ENST00000494208 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.81
SLC8A3-206ENST00000494208 KIF27Q86VH2 1401 aa20.08■□□□□ 0.81
SLC8A3-206ENST00000494208 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.8
SLC8A3-206ENST00000494208 CEP164Q9UPV0 1460 aa20.07■□□□□ 0.8
SLC8A3-206ENST00000494208 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
SLC8A3-206ENST00000494208 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
SLC8A3-206ENST00000494208 MTUS2Q5JR59 1369 aa20.04■□□□□ 0.8
SLC8A3-206ENST00000494208 SENP3-EIF4A1A0A087X0R7 540 aa20.03■□□□□ 0.8
SLC8A3-206ENST00000494208 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
SLC8A3-206ENST00000494208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.79
SLC8A3-206ENST00000494208 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
SLC8A3-206ENST00000494208 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
SLC8A3-206ENST00000494208 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
SLC8A3-206ENST00000494208 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
SLC8A3-206ENST00000494208 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
SLC8A3-206ENST00000494208 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
SLC8A3-206ENST00000494208 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
SLC8A3-206ENST00000494208 CUX2O14529 1486 aa19.96■□□□□ 0.79
SLC8A3-206ENST00000494208 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
SLC8A3-206ENST00000494208 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
SLC8A3-206ENST00000494208 UPF2Q9HAU5 1272 aaKnown RBP19.93■□□□□ 0.78
SLC8A3-206ENST00000494208 TSHZ2Q9NRE2 1034 aa19.93■□□□□ 0.78
SLC8A3-206ENST00000494208 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
SLC8A3-206ENST00000494208 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
SLC8A3-206ENST00000494208 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
SLC8A3-206ENST00000494208 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
SLC8A3-206ENST00000494208 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
SLC8A3-206ENST00000494208 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
SLC8A3-206ENST00000494208 DDRGK1Q96HY6 314 aa19.85■□□□□ 0.77
SLC8A3-206ENST00000494208 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
SLC8A3-206ENST00000494208 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
SLC8A3-206ENST00000494208 HSP90AA1P07900 732 aaKnown RBP19.83■□□□□ 0.76
SLC8A3-206ENST00000494208 DEKP35659 375 aaKnown RBP19.83■□□□□ 0.76
SLC8A3-206ENST00000494208 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
SLC8A3-206ENST00000494208 RTN4Q9NQC3 1192 aaKnown RBP19.82■□□□□ 0.76
SLC8A3-206ENST00000494208 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
SLC8A3-206ENST00000494208 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
SLC8A3-206ENST00000494208 NOP58Q9Y2X3 529 aaKnown RBP19.8■□□□□ 0.76
SLC8A3-206ENST00000494208 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
SLC8A3-206ENST00000494208 EIF4G2P78344 907 aaKnown RBP eCLIP19.79■□□□□ 0.76
SLC8A3-206ENST00000494208 ARXQ96QS3 562 aa19.79■□□□□ 0.76
SLC8A3-206ENST00000494208 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
SLC8A3-206ENST00000494208 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.76
SLC8A3-206ENST00000494208 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
SLC8A3-206ENST00000494208 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
SLC8A3-206ENST00000494208 PLEKHD1A6NEE1 506 aa19.76■□□□□ 0.75
SLC8A3-206ENST00000494208 RAPGEF2Q9Y4G8 1499 aa19.76■□□□□ 0.75
SLC8A3-206ENST00000494208 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
SLC8A3-206ENST00000494208 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
SLC8A3-206ENST00000494208 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
SLC8A3-206ENST00000494208 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
SLC8A3-206ENST00000494208 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
SLC8A3-206ENST00000494208 TRIM44Q96DX7 344 aaPredicted RBP19.71■□□□□ 0.75
SLC8A3-206ENST00000494208 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
SLC8A3-206ENST00000494208 PPP4R2Q9NY27 417 aa19.7■□□□□ 0.74
SLC8A3-206ENST00000494208 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
SLC8A3-206ENST00000494208 CFTRP13569 1480 aa19.67■□□□□ 0.74
SLC8A3-206ENST00000494208 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
SLC8A3-206ENST00000494208 BECN1Q14457 450 aa19.65■□□□□ 0.74
SLC8A3-206ENST00000494208 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
SLC8A3-206ENST00000494208 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
SLC8A3-206ENST00000494208 CFDP1Q9UEE9 299 aaPredicted RBP19.65■□□□□ 0.74
SLC8A3-206ENST00000494208 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
SLC8A3-206ENST00000494208 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
SLC8A3-206ENST00000494208 NESP48681 1621 aa19.61■□□□□ 0.73
SLC8A3-206ENST00000494208 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
SLC8A3-206ENST00000494208 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
SLC8A3-206ENST00000494208 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
SLC8A3-206ENST00000494208 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
SLC8A3-206ENST00000494208 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
SLC8A3-206ENST00000494208 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
SLC8A3-206ENST00000494208 CUX1P39880 1505 aa19.53■□□□□ 0.72
SLC8A3-206ENST00000494208 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
SLC8A3-206ENST00000494208 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
SLC8A3-206ENST00000494208 FOXD1Q16676 465 aa19.5■□□□□ 0.71
SLC8A3-206ENST00000494208 IGF1RP08069 1367 aa19.5■□□□□ 0.71
SLC8A3-206ENST00000494208 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
SLC8A3-206ENST00000494208 CARD11Q9BXL7 1154 aa19.49■□□□□ 0.71
SLC8A3-206ENST00000494208 HSPA5P11021 654 aaKnown RBP19.48■□□□□ 0.71
SLC8A3-206ENST00000494208 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
SLC8A3-206ENST00000494208 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
SLC8A3-206ENST00000494208 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
SLC8A3-206ENST00000494208 MYH16Q9H6N6 1097 aa19.43■□□□□ 0.7
SLC8A3-206ENST00000494208 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
SLC8A3-206ENST00000494208 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
SLC8A3-206ENST00000494208 KIF21BO75037 1637 aa19.41■□□□□ 0.7
SLC8A3-206ENST00000494208 CFAP53Q96M91 514 aa19.4■□□□□ 0.7
SLC8A3-206ENST00000494208 C14orf37Q86TY3 774 aa19.39■□□□□ 0.7
SLC8A3-206ENST00000494208 L1TD1Q5T7N2 865 aaKnown RBP19.39■□□□□ 0.69
SLC8A3-206ENST00000494208 TIMELESSQ9UNS1 1208 aa19.39■□□□□ 0.69
SLC8A3-206ENST00000494208 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
SLC8A3-206ENST00000494208 PLEKHG5O94827 1062 aa19.37■□□□□ 0.69
SLC8A3-206ENST00000494208 GAPVD1Q14C86 1478 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms