RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
CLCN6-208ENST00000494028 SAMD9Q5K651 1589 aa16.59■□□□□ 0.25
CLCN6-208ENST00000494028 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
CLCN6-208ENST00000494028 TIAM1Q13009 1591 aa16.54■□□□□ 0.24
CLCN6-208ENST00000494028 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
CLCN6-208ENST00000494028 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CLCN6-208ENST00000494028 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
CLCN6-208ENST00000494028 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
CLCN6-208ENST00000494028 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-208ENST00000494028 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.234e-11■■■■■ 43.5
CLCN6-208ENST00000494028 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
CLCN6-208ENST00000494028 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
CLCN6-208ENST00000494028 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
CLCN6-208ENST00000494028 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
CLCN6-208ENST00000494028 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
CLCN6-208ENST00000494028 MAGI1Q96QZ7 1491 aaPredicted RBP16.4■□□□□ 0.22
CLCN6-208ENST00000494028 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
CLCN6-208ENST00000494028 APLP2Q06481 763 aa16.39■□□□□ 0.21
CLCN6-208ENST00000494028 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
CLCN6-208ENST00000494028 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
CLCN6-208ENST00000494028 LRRC9Q6ZRR7 1453 aa16.36■□□□□ 0.21
CLCN6-208ENST00000494028 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
CLCN6-208ENST00000494028 RRBP1Q9P2E9 1410 aaKnown RBP16.36■□□□□ 0.21
CLCN6-208ENST00000494028 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
CLCN6-208ENST00000494028 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
CLCN6-208ENST00000494028 HECW1Q76N89 1606 aa16.33■□□□□ 0.2
CLCN6-208ENST00000494028 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
CLCN6-208ENST00000494028 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
CLCN6-208ENST00000494028 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
CLCN6-208ENST00000494028 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
CLCN6-208ENST00000494028 EHBP1L1Q8N3D4 1523 aa16.26■□□□□ 0.19
CLCN6-208ENST00000494028 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
CLCN6-208ENST00000494028 DISP1Q96F81 1524 aa16.25■□□□□ 0.19
CLCN6-208ENST00000494028 NUP160Q12769 1436 aa16.24■□□□□ 0.19
CLCN6-208ENST00000494028 CHD1O14646 1710 aa16.24■□□□□ 0.19
CLCN6-208ENST00000494028 CCDC18Q5T9S5 1454 aa16.23■□□□□ 0.19
CLCN6-208ENST00000494028 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
CLCN6-208ENST00000494028 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
CLCN6-208ENST00000494028 MAGI3Q5TCQ9 1506 aa16.2■□□□□ 0.18
CLCN6-208ENST00000494028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
CLCN6-208ENST00000494028 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
CLCN6-208ENST00000494028 RAPGEF6Q8TEU7 1601 aa16.19■□□□□ 0.18
CLCN6-208ENST00000494028 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
CLCN6-208ENST00000494028 CDK13Q14004 1512 aaKnown RBP16.15■□□□□ 0.18
CLCN6-208ENST00000494028 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
CLCN6-208ENST00000494028 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.18
CLCN6-208ENST00000494028 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
CLCN6-208ENST00000494028 NCOA2Q15596 1464 aa16.11■□□□□ 0.17
CLCN6-208ENST00000494028 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
CLCN6-208ENST00000494028 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
CLCN6-208ENST00000494028 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
CLCN6-208ENST00000494028 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
CLCN6-208ENST00000494028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.07■□□□□ 0.16
CLCN6-208ENST00000494028 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
CLCN6-208ENST00000494028 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
CLCN6-208ENST00000494028 ABCA8O94911 1581 aa16.06■□□□□ 0.16
CLCN6-208ENST00000494028 MYOM3Q5VTT5 1437 aa16.06■□□□□ 0.16
CLCN6-208ENST00000494028 ATP1B4Q9UN42 357 aaPredicted RBP16.06■□□□□ 0.16
CLCN6-208ENST00000494028 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-208ENST00000494028 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
CLCN6-208ENST00000494028 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
CLCN6-208ENST00000494028 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
CLCN6-208ENST00000494028 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
CLCN6-208ENST00000494028 ITSN2Q9NZM3 1697 aa16■□□□□ 0.15
CLCN6-208ENST00000494028 PLB1Q6P1J6 1458 aa16■□□□□ 0.15
CLCN6-208ENST00000494028 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
CLCN6-208ENST00000494028 KIF14Q15058 1648 aa15.96■□□□□ 0.15
CLCN6-208ENST00000494028 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
CLCN6-208ENST00000494028 FBLN2P98095 1184 aa15.95■□□□□ 0.14
CLCN6-208ENST00000494028 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
CLCN6-208ENST00000494028 TROQ12816 1431 aaPredicted RBP15.93■□□□□ 0.14
CLCN6-208ENST00000494028 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
CLCN6-208ENST00000494028 MIA2Q96PC5 1412 aa15.92■□□□□ 0.14
CLCN6-208ENST00000494028 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
CLCN6-208ENST00000494028 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
CLCN6-208ENST00000494028 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
CLCN6-208ENST00000494028 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
CLCN6-208ENST00000494028 PRG4Q92954 1404 aaPredicted RBP15.91■□□□□ 0.14
CLCN6-208ENST00000494028 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
CLCN6-208ENST00000494028 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
CLCN6-208ENST00000494028 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
CLCN6-208ENST00000494028 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
CLCN6-208ENST00000494028 ITGAEP38570 1179 aa15.89■□□□□ 0.13
CLCN6-208ENST00000494028 HFM1A2PYH4 1435 aa15.88■□□□□ 0.13
CLCN6-208ENST00000494028 AKNAQ7Z591 1439 aa15.88■□□□□ 0.13
CLCN6-208ENST00000494028 ADGBQ8N7X0 1667 aa15.87■□□□□ 0.13
CLCN6-208ENST00000494028 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
CLCN6-208ENST00000494028 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
CLCN6-208ENST00000494028 ATP10BO94823 1461 aa15.83■□□□□ 0.12
CLCN6-208ENST00000494028 ABCC2Q92887 1545 aa15.83■□□□□ 0.12
CLCN6-208ENST00000494028 NAIPQ13075 1403 aa15.82■□□□□ 0.12
CLCN6-208ENST00000494028 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
CLCN6-208ENST00000494028 ABCC10Q5T3U5 1492 aa15.82■□□□□ 0.12
CLCN6-208ENST00000494028 PREX2Q70Z35 1606 aa15.82■□□□□ 0.12
CLCN6-208ENST00000494028 KDM6BO15054 1643 aa15.8■□□□□ 0.12
CLCN6-208ENST00000494028 PTPRGP23470 1445 aa15.79■□□□□ 0.12
CLCN6-208ENST00000494028 DAPK1P53355 1430 aa15.79■□□□□ 0.12
CLCN6-208ENST00000494028 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
CLCN6-208ENST00000494028 ZCCHC11Q5TAX3 1644 aaKnown RBP15.78■□□□□ 0.12
CLCN6-208ENST00000494028 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms