RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
UBA3-211ENST00000493957 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
UBA3-211ENST00000493957 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
UBA3-211ENST00000493957 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
UBA3-211ENST00000493957 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
UBA3-211ENST00000493957 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
UBA3-211ENST00000493957 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
UBA3-211ENST00000493957 CUL7Q14999 1698 aa19.87■□□□□ 0.77
UBA3-211ENST00000493957 IGF1RP08069 1367 aa19.86■□□□□ 0.77
UBA3-211ENST00000493957 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
UBA3-211ENST00000493957 NUP160Q12769 1436 aa19.8■□□□□ 0.76
UBA3-211ENST00000493957 RNF39Q9H2S5 420 aa19.79■□□□□ 0.76
UBA3-211ENST00000493957 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
UBA3-211ENST00000493957 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
UBA3-211ENST00000493957 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
UBA3-211ENST00000493957 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
UBA3-211ENST00000493957 HOXD11P31277 338 aaPredicted RBP19.66■□□□□ 0.74
UBA3-211ENST00000493957 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
UBA3-211ENST00000493957 PRXQ9BXM0 1461 aa19.6■□□□□ 0.73
UBA3-211ENST00000493957 CTTNBP2Q8WZ74 1663 aa19.6■□□□□ 0.73
UBA3-211ENST00000493957 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
UBA3-211ENST00000493957 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
UBA3-211ENST00000493957 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
UBA3-211ENST00000493957 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
UBA3-211ENST00000493957 PRG4Q92954 1404 aaPredicted RBP19.56■□□□□ 0.72
UBA3-211ENST00000493957 EEA1Q15075 1411 aa19.55■□□□□ 0.72
UBA3-211ENST00000493957 JPH4Q96JJ6 628 aa19.55■□□□□ 0.72
UBA3-211ENST00000493957 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
UBA3-211ENST00000493957 PPP4R3CPQ6ZMV5 832 aa19.49■□□□□ 0.71
UBA3-211ENST00000493957 KIF21BO75037 1637 aa19.47■□□□□ 0.71
UBA3-211ENST00000493957 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
UBA3-211ENST00000493957 UGGT2Q9NYU1 1516 aa19.43■□□□□ 0.7
UBA3-211ENST00000493957 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
UBA3-211ENST00000493957 KIAA0556O60303 1618 aa19.4■□□□□ 0.7
UBA3-211ENST00000493957 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
UBA3-211ENST00000493957 ADCY10Q96PN6 1610 aa19.35■□□□□ 0.69
UBA3-211ENST00000493957 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
UBA3-211ENST00000493957 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
UBA3-211ENST00000493957 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
UBA3-211ENST00000493957 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
UBA3-211ENST00000493957 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
UBA3-211ENST00000493957 SAMD9Q5K651 1589 aa19.29■□□□□ 0.68
UBA3-211ENST00000493957 PTPRGP23470 1445 aa19.29■□□□□ 0.68
UBA3-211ENST00000493957 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
UBA3-211ENST00000493957 RANGAP1P46060 587 aaPredicted RBP19.23■□□□□ 0.67
UBA3-211ENST00000493957 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
UBA3-211ENST00000493957 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
UBA3-211ENST00000493957 KIF13AQ9H1H9 1805 aa19.19■□□□□ 0.66
UBA3-211ENST00000493957 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
UBA3-211ENST00000493957 UACAQ9BZF9 1416 aa19.18■□□□□ 0.66
UBA3-211ENST00000493957 PLB1Q6P1J6 1458 aa19.18■□□□□ 0.66
UBA3-211ENST00000493957 ABCA8O94911 1581 aa19.18■□□□□ 0.66
UBA3-211ENST00000493957 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
UBA3-211ENST00000493957 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
UBA3-211ENST00000493957 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
UBA3-211ENST00000493957 EFCAB5A4FU69 1503 aa19.15■□□□□ 0.66
UBA3-211ENST00000493957 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
UBA3-211ENST00000493957 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
UBA3-211ENST00000493957 RAPGEF6Q8TEU7 1601 aa19.1■□□□□ 0.65
UBA3-211ENST00000493957 ARHGAP35Q9NRY4 1499 aa19.09■□□□□ 0.65
UBA3-211ENST00000493957 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
UBA3-211ENST00000493957 DIP2BQ9P265 1576 aa19.08■□□□□ 0.65
UBA3-211ENST00000493957 NPM1P06748 294 aaKnown RBP eCLIP19.08■□□□□ 0.64
UBA3-211ENST00000493957 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
UBA3-211ENST00000493957 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
UBA3-211ENST00000493957 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
UBA3-211ENST00000493957 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
UBA3-211ENST00000493957 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
UBA3-211ENST00000493957 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
UBA3-211ENST00000493957 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
UBA3-211ENST00000493957 ATP10BO94823 1461 aa18.97■□□□□ 0.63
UBA3-211ENST00000493957 CLIP1P30622 1438 aa18.95■□□□□ 0.62
UBA3-211ENST00000493957 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
UBA3-211ENST00000493957 WDR7Q9Y4E6 1490 aa18.94■□□□□ 0.62
UBA3-211ENST00000493957 EPRSP07814 1512 aaKnown RBP18.94■□□□□ 0.62
UBA3-211ENST00000493957 PPRC1Q5VV67 1664 aaKnown RBP18.93■□□□□ 0.62
UBA3-211ENST00000493957 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
UBA3-211ENST00000493957 GLI2P10070 1586 aa18.92■□□□□ 0.62
UBA3-211ENST00000493957 HECW1Q76N89 1606 aa18.92■□□□□ 0.62
UBA3-211ENST00000493957 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
UBA3-211ENST00000493957 FMN1Q68DA7 1419 aa18.91■□□□□ 0.62
UBA3-211ENST00000493957 MAP3K4Q9Y6R4 1608 aa18.9■□□□□ 0.62
UBA3-211ENST00000493957 CEP162Q5TB80 1403 aa18.9■□□□□ 0.62
UBA3-211ENST00000493957 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
UBA3-211ENST00000493957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.83■□□□□ 0.6
UBA3-211ENST00000493957 HNRNPUL2Q1KMD3 747 aaKnown RBP18.83■□□□□ 0.6
UBA3-211ENST00000493957 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
UBA3-211ENST00000493957 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
UBA3-211ENST00000493957 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
UBA3-211ENST00000493957 ABCA9Q8IUA7 1624 aa18.8■□□□□ 0.6
UBA3-211ENST00000493957 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
UBA3-211ENST00000493957 TTC37Q6PGP7 1564 aa18.75■□□□□ 0.59
UBA3-211ENST00000493957 KIF14Q15058 1648 aa18.74■□□□□ 0.59
UBA3-211ENST00000493957 KDM6BO15054 1643 aa18.74■□□□□ 0.59
UBA3-211ENST00000493957 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
UBA3-211ENST00000493957 CD109Q6YHK3 1445 aa18.74■□□□□ 0.59
UBA3-211ENST00000493957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBA3-211ENST00000493957 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
UBA3-211ENST00000493957 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
UBA3-211ENST00000493957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms