RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 JPH4Q96JJ6 628 aa21.79■■□□□ 1.08
HSPG2-212ENST00000493940 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
HSPG2-212ENST00000493940 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
HSPG2-212ENST00000493940 KIAA0586Q9BVV6 1533 aa21.7■■□□□ 1.07
HSPG2-212ENST00000493940 AEBP2Q6ZN18 517 aaPredicted RBP21.59■■□□□ 1.05
HSPG2-212ENST00000493940 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.04
HSPG2-212ENST00000493940 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
HSPG2-212ENST00000493940 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
HSPG2-212ENST00000493940 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
HSPG2-212ENST00000493940 DISP1Q96F81 1524 aa21.49■■□□□ 1.03
HSPG2-212ENST00000493940 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
HSPG2-212ENST00000493940 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
HSPG2-212ENST00000493940 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
HSPG2-212ENST00000493940 PTPRGP23470 1445 aa21.44■■□□□ 1.02
HSPG2-212ENST00000493940 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
HSPG2-212ENST00000493940 TNIKQ9UKE5 1360 aa21.41■■□□□ 1.02
HSPG2-212ENST00000493940 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
HSPG2-212ENST00000493940 KIAA0556O60303 1618 aa21.38■■□□□ 1.01
HSPG2-212ENST00000493940 MAPKBP1O60336 1514 aa21.37■■□□□ 1.01
HSPG2-212ENST00000493940 CSRNP3Q8WYN3 585 aa21.36■■□□□ 1.01
HSPG2-212ENST00000493940 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
HSPG2-212ENST00000493940 NPM1P06748 294 aaKnown RBP eCLIP21.33■■□□□ 1.01
HSPG2-212ENST00000493940 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
HSPG2-212ENST00000493940 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
HSPG2-212ENST00000493940 TSPOAP1O95153 1857 aa21.3■■□□□ 1
HSPG2-212ENST00000493940 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
HSPG2-212ENST00000493940 FAM69CQ0P6D2 419 aa21.29■■□□□ 1
HSPG2-212ENST00000493940 ABCC2Q92887 1545 aa21.29■■□□□ 1
HSPG2-212ENST00000493940 UACAQ9BZF9 1416 aa21.29■■□□□ 1
HSPG2-212ENST00000493940 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
HSPG2-212ENST00000493940 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
HSPG2-212ENST00000493940 PLB1Q6P1J6 1458 aa21.23■□□□□ 0.99
HSPG2-212ENST00000493940 EEA1Q15075 1411 aa21.21■□□□□ 0.99
HSPG2-212ENST00000493940 KDM5BQ9UGL1 1544 aa21.21■□□□□ 0.99
HSPG2-212ENST00000493940 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
HSPG2-212ENST00000493940 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
HSPG2-212ENST00000493940 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
HSPG2-212ENST00000493940 ABCA8O94911 1581 aa21.19■□□□□ 0.98
HSPG2-212ENST00000493940 PPRC1Q5VV67 1664 aaKnown RBP21.17■□□□□ 0.98
HSPG2-212ENST00000493940 SAMD9Q5K651 1589 aa21.16■□□□□ 0.98
HSPG2-212ENST00000493940 KIF21BO75037 1637 aa21.15■□□□□ 0.98
HSPG2-212ENST00000493940 GLI2P10070 1586 aa21.11■□□□□ 0.97
HSPG2-212ENST00000493940 RANGAP1P46060 587 aaPredicted RBP21.1■□□□□ 0.97
HSPG2-212ENST00000493940 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
HSPG2-212ENST00000493940 EPRSP07814 1512 aaKnown RBP21.09■□□□□ 0.97
HSPG2-212ENST00000493940 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
HSPG2-212ENST00000493940 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
HSPG2-212ENST00000493940 KDM6BO15054 1643 aa21.03■□□□□ 0.96
HSPG2-212ENST00000493940 FHOD3Q2V2M9 1422 aa21.02■□□□□ 0.96
HSPG2-212ENST00000493940 ATP10BO94823 1461 aa21.01■□□□□ 0.95
HSPG2-212ENST00000493940 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
HSPG2-212ENST00000493940 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
HSPG2-212ENST00000493940 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
HSPG2-212ENST00000493940 COL17A1Q9UMD9 1497 aaPredicted RBP20.98■□□□□ 0.95
HSPG2-212ENST00000493940 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
HSPG2-212ENST00000493940 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
HSPG2-212ENST00000493940 NUP153P49790 1475 aaKnown RBP20.93■□□□□ 0.94
HSPG2-212ENST00000493940 CFAP43Q8NDM7 1665 aa20.93■□□□□ 0.94
HSPG2-212ENST00000493940 EFCAB5A4FU69 1503 aa20.9■□□□□ 0.94
HSPG2-212ENST00000493940 ARHGAP35Q9NRY4 1499 aa20.87■□□□□ 0.93
HSPG2-212ENST00000493940 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
HSPG2-212ENST00000493940 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.93
HSPG2-212ENST00000493940 ABCA9Q8IUA7 1624 aa20.83■□□□□ 0.93
HSPG2-212ENST00000493940 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
HSPG2-212ENST00000493940 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
HSPG2-212ENST00000493940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
HSPG2-212ENST00000493940 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
HSPG2-212ENST00000493940 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
HSPG2-212ENST00000493940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.7■□□□□ 0.9
HSPG2-212ENST00000493940 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
HSPG2-212ENST00000493940 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
HSPG2-212ENST00000493940 TTC37Q6PGP7 1564 aa20.69■□□□□ 0.9
HSPG2-212ENST00000493940 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
HSPG2-212ENST00000493940 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
HSPG2-212ENST00000493940 ATP1B4Q9UN42 357 aaPredicted RBP20.68■□□□□ 0.9
HSPG2-212ENST00000493940 ARAP3Q8WWN8 1544 aa20.68■□□□□ 0.9
HSPG2-212ENST00000493940 ILDR1Q86SU0 546 aaPredicted RBP20.63■□□□□ 0.89
HSPG2-212ENST00000493940 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
HSPG2-212ENST00000493940 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
HSPG2-212ENST00000493940 RAPGEF3O95398 923 aa20.62■□□□□ 0.89
HSPG2-212ENST00000493940 KIF14Q15058 1648 aa20.62■□□□□ 0.89
HSPG2-212ENST00000493940 NEO1Q92859 1461 aa20.6■□□□□ 0.89
HSPG2-212ENST00000493940 RICTORQ6R327 1708 aa20.58■□□□□ 0.89
HSPG2-212ENST00000493940 CLIP1P30622 1438 aa20.57■□□□□ 0.88
HSPG2-212ENST00000493940 CASKIN1Q8WXD9 1431 aa20.56■□□□□ 0.88
HSPG2-212ENST00000493940 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
HSPG2-212ENST00000493940 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
HSPG2-212ENST00000493940 FANCAO15360 1455 aa20.55■□□□□ 0.88
HSPG2-212ENST00000493940 AKNAQ7Z591 1439 aa20.54■□□□□ 0.88
HSPG2-212ENST00000493940 CDC42BPBQ9Y5S2 1711 aa20.52■□□□□ 0.88
HSPG2-212ENST00000493940 PLCH2O75038 1416 aa20.52■□□□□ 0.87
HSPG2-212ENST00000493940 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.87
HSPG2-212ENST00000493940 LOC105371045A0A1W2PR82 267 aa20.51■□□□□ 0.87
HSPG2-212ENST00000493940 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
HSPG2-212ENST00000493940 SIGLEC1Q9BZZ2 1709 aa20.49■□□□□ 0.87
HSPG2-212ENST00000493940 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
HSPG2-212ENST00000493940 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
HSPG2-212ENST00000493940 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
HSPG2-212ENST00000493940 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
HSPG2-212ENST00000493940 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms