RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 JPH4Q96JJ6 628 aa13.77□□□□□ -0.21
SEMA3F-209ENST00000493743 KIF27Q86VH2 1401 aa13.74□□□□□ -0.21
SEMA3F-209ENST00000493743 KIAA0586Q9BVV6 1533 aa13.73□□□□□ -0.21
SEMA3F-209ENST00000493743 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
SEMA3F-209ENST00000493743 MAPKBP1O60336 1514 aa13.71□□□□□ -0.21
SEMA3F-209ENST00000493743 IGF1RP08069 1367 aa13.71□□□□□ -0.22
SEMA3F-209ENST00000493743 AEBP2Q6ZN18 517 aaPredicted RBP13.7□□□□□ -0.22
SEMA3F-209ENST00000493743 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
SEMA3F-209ENST00000493743 ABCC10Q5T3U5 1492 aa13.67□□□□□ -0.22
SEMA3F-209ENST00000493743 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
SEMA3F-209ENST00000493743 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
SEMA3F-209ENST00000493743 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
SEMA3F-209ENST00000493743 CARMIL1Q5VZK9 1371 aa13.63□□□□□ -0.23
SEMA3F-209ENST00000493743 FAM69CQ0P6D2 419 aa13.62□□□□□ -0.23
SEMA3F-209ENST00000493743 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
SEMA3F-209ENST00000493743 KDM6BO15054 1643 aa13.59□□□□□ -0.23
SEMA3F-209ENST00000493743 PTPRGP23470 1445 aa13.58□□□□□ -0.24
SEMA3F-209ENST00000493743 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
SEMA3F-209ENST00000493743 ABCC2Q92887 1545 aa13.55□□□□□ -0.24
SEMA3F-209ENST00000493743 CTTNBP2Q8WZ74 1663 aa13.55□□□□□ -0.24
SEMA3F-209ENST00000493743 UHRF1BP1LA0JNW5 1464 aa13.53□□□□□ -0.24
SEMA3F-209ENST00000493743 RAPGEF2Q9Y4G8 1499 aa13.53□□□□□ -0.24
SEMA3F-209ENST00000493743 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
SEMA3F-209ENST00000493743 TTBK1Q5TCY1 1321 aaPredicted RBP13.52□□□□□ -0.25
SEMA3F-209ENST00000493743 UGGT2Q9NYU1 1516 aa13.52□□□□□ -0.25
SEMA3F-209ENST00000493743 PPRC1Q5VV67 1664 aaKnown RBP13.52□□□□□ -0.25
SEMA3F-209ENST00000493743 KIAA0556O60303 1618 aa13.51□□□□□ -0.25
SEMA3F-209ENST00000493743 GLI2P10070 1586 aa13.51□□□□□ -0.25
SEMA3F-209ENST00000493743 PLB1Q6P1J6 1458 aa13.5□□□□□ -0.25
SEMA3F-209ENST00000493743 ASXL2Q76L83 1435 aa13.49□□□□□ -0.25
SEMA3F-209ENST00000493743 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
SEMA3F-209ENST00000493743 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-209ENST00000493743 KDM5BQ9UGL1 1544 aa13.47□□□□□ -0.25
SEMA3F-209ENST00000493743 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.25
SEMA3F-209ENST00000493743 EPRSP07814 1512 aaKnown RBP13.43□□□□□ -0.26
SEMA3F-209ENST00000493743 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
SEMA3F-209ENST00000493743 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
SEMA3F-209ENST00000493743 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
SEMA3F-209ENST00000493743 ABCA8O94911 1581 aa13.37□□□□□ -0.27
SEMA3F-209ENST00000493743 WDR7Q9Y4E6 1490 aa13.37□□□□□ -0.27
SEMA3F-209ENST00000493743 KDM4FA0A1W2PPD8 638 aa13.37□□□□□ -0.27
SEMA3F-209ENST00000493743 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
SEMA3F-209ENST00000493743 COL17A1Q9UMD9 1497 aaPredicted RBP13.34□□□□□ -0.27
SEMA3F-209ENST00000493743 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
SEMA3F-209ENST00000493743 MAGI3Q5TCQ9 1506 aa13.29□□□□□ -0.28
SEMA3F-209ENST00000493743 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
SEMA3F-209ENST00000493743 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
SEMA3F-209ENST00000493743 FAM9AQ8IZU1 332 aaPredicted RBP13.25□□□□□ -0.29
SEMA3F-209ENST00000493743 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
SEMA3F-209ENST00000493743 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
SEMA3F-209ENST00000493743 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
SEMA3F-209ENST00000493743 KIF21BO75037 1637 aa13.22□□□□□ -0.29
SEMA3F-209ENST00000493743 ATP10BO94823 1461 aa13.22□□□□□ -0.29
SEMA3F-209ENST00000493743 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
SEMA3F-209ENST00000493743 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
SEMA3F-209ENST00000493743 EEA1Q15075 1411 aa13.2□□□□□ -0.3
SEMA3F-209ENST00000493743 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
SEMA3F-209ENST00000493743 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
SEMA3F-209ENST00000493743 HECW2Q9P2P5 1572 aa13.18□□□□□ -0.3
SEMA3F-209ENST00000493743 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
SEMA3F-209ENST00000493743 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
SEMA3F-209ENST00000493743 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
SEMA3F-209ENST00000493743 NEO1Q92859 1461 aa13.13□□□□□ -0.31
SEMA3F-209ENST00000493743 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
SEMA3F-209ENST00000493743 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
SEMA3F-209ENST00000493743 CFAP74Q9C0B2 1584 aa13.11□□□□□ -0.31
SEMA3F-209ENST00000493743 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
SEMA3F-209ENST00000493743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
SEMA3F-209ENST00000493743 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
SEMA3F-209ENST00000493743 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
SEMA3F-209ENST00000493743 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
SEMA3F-209ENST00000493743 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
SEMA3F-209ENST00000493743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.06□□□□□ -0.32
SEMA3F-209ENST00000493743 ARHGEF40Q8TER5 1519 aa13.06□□□□□ -0.32
SEMA3F-209ENST00000493743 TTC37Q6PGP7 1564 aa13.06□□□□□ -0.32
SEMA3F-209ENST00000493743 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
SEMA3F-209ENST00000493743 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
SEMA3F-209ENST00000493743 PLEKHD1A6NEE1 506 aa13.04□□□□□ -0.32
SEMA3F-209ENST00000493743 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-209ENST00000493743 FANCAO15360 1455 aa13.03□□□□□ -0.32
SEMA3F-209ENST00000493743 PTPRMP28827 1452 aa13.03□□□□□ -0.32
SEMA3F-209ENST00000493743 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
SEMA3F-209ENST00000493743 DENND4BO75064 1496 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-209ENST00000493743 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
SEMA3F-209ENST00000493743 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.33
SEMA3F-209ENST00000493743 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
SEMA3F-209ENST00000493743 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
SEMA3F-209ENST00000493743 ZMYM4Q5VZL5 1548 aa13.01□□□□□ -0.33
SEMA3F-209ENST00000493743 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
SEMA3F-209ENST00000493743 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
SEMA3F-209ENST00000493743 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
SEMA3F-209ENST00000493743 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
SEMA3F-209ENST00000493743 ARID4BQ4LE39 1312 aaPredicted RBP12.97□□□□□ -0.33
SEMA3F-209ENST00000493743 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
SEMA3F-209ENST00000493743 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.34
SEMA3F-209ENST00000493743 KIF14Q15058 1648 aa12.95□□□□□ -0.34
SEMA3F-209ENST00000493743 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
SEMA3F-209ENST00000493743 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
SEMA3F-209ENST00000493743 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
SEMA3F-209ENST00000493743 PLCH2O75038 1416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms