RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
NECTIN3-211ENST00000493615 GRIN2AQ12879 1464 aa30.1■■■□□ 2.41
NECTIN3-211ENST00000493615 CLIP1P30622 1438 aa30.08■■■□□ 2.41
NECTIN3-211ENST00000493615 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
NECTIN3-211ENST00000493615 CTTNBP2Q8WZ74 1663 aa29.94■■■□□ 2.38
NECTIN3-211ENST00000493615 NUP160Q12769 1436 aa29.92■■■□□ 2.38
NECTIN3-211ENST00000493615 ARHGAP35Q9NRY4 1499 aa29.9■■■□□ 2.38
NECTIN3-211ENST00000493615 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
NECTIN3-211ENST00000493615 ARAP1Q96P48 1450 aa29.84■■■□□ 2.37
NECTIN3-211ENST00000493615 KIAA0586Q9BVV6 1533 aa29.82■■■□□ 2.36
NECTIN3-211ENST00000493615 IQGAP2Q13576 1575 aa29.8■■■□□ 2.36
NECTIN3-211ENST00000493615 P3H3Q8IVL6 736 aa29.78■■■□□ 2.36
NECTIN3-211ENST00000493615 DNAJC5Q9H3Z4 198 aa29.78■■■□□ 2.36
NECTIN3-211ENST00000493615 VPS8Q8N3P4 1428 aa29.75■■■□□ 2.35
NECTIN3-211ENST00000493615 EFCAB5A4FU69 1503 aa29.71■■■□□ 2.35
NECTIN3-211ENST00000493615 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
NECTIN3-211ENST00000493615 FHOD3Q2V2M9 1422 aa29.69■■■□□ 2.34
NECTIN3-211ENST00000493615 SAMD9Q5K651 1589 aa29.68■■■□□ 2.34
NECTIN3-211ENST00000493615 UGGT2Q9NYU1 1516 aa29.67■■■□□ 2.34
NECTIN3-211ENST00000493615 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
NECTIN3-211ENST00000493615 PRG4Q92954 1404 aaPredicted RBP29.59■■■□□ 2.33
NECTIN3-211ENST00000493615 DISP1Q96F81 1524 aa29.59■■■□□ 2.33
NECTIN3-211ENST00000493615 ARHGEF11O15085 1522 aa29.58■■■□□ 2.33
NECTIN3-211ENST00000493615 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
NECTIN3-211ENST00000493615 ERCC6L2Q5T890 1561 aa29.58■■■□□ 2.33
NECTIN3-211ENST00000493615 RIMBP3CA6NJZ7 1639 aa29.55■■■□□ 2.32
NECTIN3-211ENST00000493615 RIMBP3BA6NNM3 1639 aa29.55■■■□□ 2.32
NECTIN3-211ENST00000493615 RIMBP3Q9UFD9 1639 aa29.55■■■□□ 2.32
NECTIN3-211ENST00000493615 KIAA0556O60303 1618 aa29.5■■■□□ 2.31
NECTIN3-211ENST00000493615 FMN1Q68DA7 1419 aa29.48■■■□□ 2.31
NECTIN3-211ENST00000493615 TTBK1Q5TCY1 1321 aaPredicted RBP29.45■■■□□ 2.3
NECTIN3-211ENST00000493615 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
NECTIN3-211ENST00000493615 PCF11O94913 1555 aaKnown RBP29.43■■■□□ 2.3
NECTIN3-211ENST00000493615 APLP2Q06481 763 aa29.42■■■□□ 2.3
NECTIN3-211ENST00000493615 CASKIN1Q8WXD9 1431 aa29.41■■■□□ 2.3
NECTIN3-211ENST00000493615 CYB5RLQ6IPT4 315 aa29.39■■■□□ 2.3
NECTIN3-211ENST00000493615 ATP1B4Q9UN42 357 aaPredicted RBP29.39■■■□□ 2.3
NECTIN3-211ENST00000493615 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
NECTIN3-211ENST00000493615 KANK4Q5T7N3 995 aaPredicted RBP29.32■■■□□ 2.28
NECTIN3-211ENST00000493615 PTPRGP23470 1445 aa29.29■■■□□ 2.28
NECTIN3-211ENST00000493615 TIAM1Q13009 1591 aa29.25■■■□□ 2.27
NECTIN3-211ENST00000493615 MAP3K1Q13233 1512 aa29.24■■■□□ 2.27
NECTIN3-211ENST00000493615 PLB1Q6P1J6 1458 aa29.23■■■□□ 2.27
NECTIN3-211ENST00000493615 TRIM26Q12899 539 aaPredicted RBP29.21■■■□□ 2.27
NECTIN3-211ENST00000493615 LRRIQ1Q96JM4 1722 aa29.18■■■□□ 2.26
NECTIN3-211ENST00000493615 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
NECTIN3-211ENST00000493615 ARID3CA6NKF2 412 aa29.17■■■□□ 2.26
NECTIN3-211ENST00000493615 PCGF6Q9BYE7 350 aa29.17■■■□□ 2.26
NECTIN3-211ENST00000493615 RAPGEF6Q8TEU7 1601 aa29.16■■■□□ 2.26
NECTIN3-211ENST00000493615 CFAP43Q8NDM7 1665 aa29.16■■■□□ 2.26
NECTIN3-211ENST00000493615 NUP153P49790 1475 aaKnown RBP29.15■■■□□ 2.26
NECTIN3-211ENST00000493615 LRRC9Q6ZRR7 1453 aa29.15■■■□□ 2.26
NECTIN3-211ENST00000493615 EPRSP07814 1512 aaKnown RBP29.14■■■□□ 2.25
NECTIN3-211ENST00000493615 ABCA8O94911 1581 aa29.12■■■□□ 2.25
NECTIN3-211ENST00000493615 CDK13Q14004 1512 aaKnown RBP29.1■■■□□ 2.25
NECTIN3-211ENST00000493615 CCDC18Q5T9S5 1454 aa29.1■■■□□ 2.25
NECTIN3-211ENST00000493615 UACAQ9BZF9 1416 aa29.09■■■□□ 2.25
NECTIN3-211ENST00000493615 ADCY10Q96PN6 1610 aa29.06■■■□□ 2.24
NECTIN3-211ENST00000493615 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
NECTIN3-211ENST00000493615 MAGI3Q5TCQ9 1506 aa29.01■■■□□ 2.23
NECTIN3-211ENST00000493615 ABCC2Q92887 1545 aa29.01■■■□□ 2.23
NECTIN3-211ENST00000493615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
NECTIN3-211ENST00000493615 HNRNPUL2Q1KMD3 747 aaKnown RBP28.99■■■□□ 2.23
NECTIN3-211ENST00000493615 UHRF1BP1LA0JNW5 1464 aa28.98■■■□□ 2.23
NECTIN3-211ENST00000493615 ATP10BO94823 1461 aa28.97■■■□□ 2.23
NECTIN3-211ENST00000493615 NPM1P06748 294 aaKnown RBP eCLIP28.96■■■□□ 2.23
NECTIN3-211ENST00000493615 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
NECTIN3-211ENST00000493615 PHLDB1Q86UU1 1377 aa28.91■■■□□ 2.22
NECTIN3-211ENST00000493615 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.21
NECTIN3-211ENST00000493615 KDM5BQ9UGL1 1544 aa28.87■■■□□ 2.21
NECTIN3-211ENST00000493615 ZCCHC11Q5TAX3 1644 aaKnown RBP28.86■■■□□ 2.21
NECTIN3-211ENST00000493615 NCOA2Q15596 1464 aa28.85■■■□□ 2.21
NECTIN3-211ENST00000493615 TROQ12816 1431 aaPredicted RBP28.81■■■□□ 2.2
NECTIN3-211ENST00000493615 RRBP1Q9P2E9 1410 aaKnown RBP28.81■■■□□ 2.2
NECTIN3-211ENST00000493615 PLEKHD1A6NEE1 506 aa28.8■■■□□ 2.2
NECTIN3-211ENST00000493615 SUPT6HQ7KZ85 1726 aaKnown RBP28.8■■■□□ 2.2
NECTIN3-211ENST00000493615 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.19
NECTIN3-211ENST00000493615 ASXL2Q76L83 1435 aa28.74■■■□□ 2.19
NECTIN3-211ENST00000493615 MAPKBP1O60336 1514 aa28.72■■■□□ 2.19
NECTIN3-211ENST00000493615 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
NECTIN3-211ENST00000493615 KIF14Q15058 1648 aa28.69■■■□□ 2.18
NECTIN3-211ENST00000493615 FGD6Q6ZV73 1430 aa28.68■■■□□ 2.18
NECTIN3-211ENST00000493615 KCNH8Q96L42 1107 aa28.67■■■□□ 2.18
NECTIN3-211ENST00000493615 TRHP20396 242 aaPredicted RBP28.65■■■□□ 2.18
NECTIN3-211ENST00000493615 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.18
NECTIN3-211ENST00000493615 WDR7Q9Y4E6 1490 aa28.63■■■□□ 2.17
NECTIN3-211ENST00000493615 ABCC10Q5T3U5 1492 aa28.6■■■□□ 2.17
NECTIN3-211ENST00000493615 FAM69CQ0P6D2 419 aa28.58■■■□□ 2.17
NECTIN3-211ENST00000493615 GPATCH8Q9UKJ3 1502 aaKnown RBP28.57■■■□□ 2.16
NECTIN3-211ENST00000493615 ITGAEP38570 1179 aa28.56■■■□□ 2.16
NECTIN3-211ENST00000493615 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
NECTIN3-211ENST00000493615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.54■■■□□ 2.16
NECTIN3-211ENST00000493615 DIP2BQ9P265 1576 aa28.54■■■□□ 2.16
NECTIN3-211ENST00000493615 KIF13AQ9H1H9 1805 aa28.53■■■□□ 2.16
NECTIN3-211ENST00000493615 PTPN23Q9H3S7 1636 aa28.52■■■□□ 2.16
NECTIN3-211ENST00000493615 CFDP1Q9UEE9 299 aaPredicted RBP28.5■■■□□ 2.15
NECTIN3-211ENST00000493615 ZNF644Q9H582 1327 aaPredicted RBP28.5■■■□□ 2.15
NECTIN3-211ENST00000493615 TCOF1Q13428 1488 aaKnown RBP28.5■■■□□ 2.15
NECTIN3-211ENST00000493615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.49■■■□□ 2.15
NECTIN3-211ENST00000493615 TTC37Q6PGP7 1564 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms