RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
GPM6B-209ENST00000493085 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
GPM6B-209ENST00000493085 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.41
GPM6B-209ENST00000493085 RAPGEF2Q9Y4G8 1499 aa17.63■□□□□ 0.41
GPM6B-209ENST00000493085 IQGAP2Q13576 1575 aa17.55■□□□□ 0.4
GPM6B-209ENST00000493085 PRXQ9BXM0 1461 aa17.53■□□□□ 0.4
GPM6B-209ENST00000493085 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
GPM6B-209ENST00000493085 EEA1Q15075 1411 aa17.52■□□□□ 0.4
GPM6B-209ENST00000493085 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
GPM6B-209ENST00000493085 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
GPM6B-209ENST00000493085 CARMIL2Q6F5E8 1435 aa17.48■□□□□ 0.39
GPM6B-209ENST00000493085 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
GPM6B-209ENST00000493085 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
GPM6B-209ENST00000493085 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
GPM6B-209ENST00000493085 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
GPM6B-209ENST00000493085 PTPRGP23470 1445 aa17.42■□□□□ 0.38
GPM6B-209ENST00000493085 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
GPM6B-209ENST00000493085 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
GPM6B-209ENST00000493085 KIAA0556O60303 1618 aa17.39■□□□□ 0.37
GPM6B-209ENST00000493085 ADCY10Q96PN6 1610 aa17.38■□□□□ 0.37
GPM6B-209ENST00000493085 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
GPM6B-209ENST00000493085 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
GPM6B-209ENST00000493085 KIF21BO75037 1637 aa17.34■□□□□ 0.37
GPM6B-209ENST00000493085 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
GPM6B-209ENST00000493085 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
GPM6B-209ENST00000493085 UHRF1BP1LA0JNW5 1464 aa17.28■□□□□ 0.36
GPM6B-209ENST00000493085 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
GPM6B-209ENST00000493085 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
GPM6B-209ENST00000493085 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
GPM6B-209ENST00000493085 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
GPM6B-209ENST00000493085 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
GPM6B-209ENST00000493085 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
GPM6B-209ENST00000493085 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
GPM6B-209ENST00000493085 PLB1Q6P1J6 1458 aa17.22■□□□□ 0.35
GPM6B-209ENST00000493085 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
GPM6B-209ENST00000493085 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
GPM6B-209ENST00000493085 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
GPM6B-209ENST00000493085 ABCA8O94911 1581 aa17.19■□□□□ 0.34
GPM6B-209ENST00000493085 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
GPM6B-209ENST00000493085 ZCCHC11Q5TAX3 1644 aaKnown RBP17.18■□□□□ 0.34
GPM6B-209ENST00000493085 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
GPM6B-209ENST00000493085 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
GPM6B-209ENST00000493085 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
GPM6B-209ENST00000493085 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
GPM6B-209ENST00000493085 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
GPM6B-209ENST00000493085 GLI2P10070 1586 aa17.08■□□□□ 0.32
GPM6B-209ENST00000493085 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
GPM6B-209ENST00000493085 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
GPM6B-209ENST00000493085 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
GPM6B-209ENST00000493085 ATP10BO94823 1461 aa17.05■□□□□ 0.32
GPM6B-209ENST00000493085 ARHGAP35Q9NRY4 1499 aa17.04■□□□□ 0.32
GPM6B-209ENST00000493085 NUP153P49790 1475 aaKnown RBP17.02■□□□□ 0.32
GPM6B-209ENST00000493085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
GPM6B-209ENST00000493085 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
GPM6B-209ENST00000493085 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
GPM6B-209ENST00000493085 KCNH8Q96L42 1107 aa17■□□□□ 0.31
GPM6B-209ENST00000493085 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
GPM6B-209ENST00000493085 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
GPM6B-209ENST00000493085 KDM6BO15054 1643 aa16.96■□□□□ 0.31
GPM6B-209ENST00000493085 CFAP43Q8NDM7 1665 aa16.95■□□□□ 0.3
GPM6B-209ENST00000493085 TEX14Q8IWB6 1497 aa16.94■□□□□ 0.3
GPM6B-209ENST00000493085 HECW1Q76N89 1606 aa16.93■□□□□ 0.3
GPM6B-209ENST00000493085 ATP1B4Q9UN42 357 aaPredicted RBP16.93■□□□□ 0.3
GPM6B-209ENST00000493085 CD109Q6YHK3 1445 aa16.93■□□□□ 0.3
GPM6B-209ENST00000493085 CLIP1P30622 1438 aa16.92■□□□□ 0.3
GPM6B-209ENST00000493085 PLEKHD1A6NEE1 506 aa16.91■□□□□ 0.3
GPM6B-209ENST00000493085 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
GPM6B-209ENST00000493085 MAGI3Q5TCQ9 1506 aa16.9■□□□□ 0.3
GPM6B-209ENST00000493085 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
GPM6B-209ENST00000493085 PCF11O94913 1555 aaKnown RBP16.85■□□□□ 0.29
GPM6B-209ENST00000493085 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
GPM6B-209ENST00000493085 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
GPM6B-209ENST00000493085 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
GPM6B-209ENST00000493085 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
GPM6B-209ENST00000493085 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
GPM6B-209ENST00000493085 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
GPM6B-209ENST00000493085 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
GPM6B-209ENST00000493085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.8■□□□□ 0.28
GPM6B-209ENST00000493085 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
GPM6B-209ENST00000493085 TTC37Q6PGP7 1564 aa16.77■□□□□ 0.28
GPM6B-209ENST00000493085 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.27
GPM6B-209ENST00000493085 PHLDB1Q86UU1 1377 aa16.77■□□□□ 0.27
GPM6B-209ENST00000493085 NEO1Q92859 1461 aa16.76■□□□□ 0.27
GPM6B-209ENST00000493085 KIF14Q15058 1648 aa16.75■□□□□ 0.27
GPM6B-209ENST00000493085 ARAP3Q8WWN8 1544 aa16.75■□□□□ 0.27
GPM6B-209ENST00000493085 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
GPM6B-209ENST00000493085 FANCAO15360 1455 aa16.71■□□□□ 0.27
GPM6B-209ENST00000493085 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
GPM6B-209ENST00000493085 PLCH2O75038 1416 aa16.7■□□□□ 0.26
GPM6B-209ENST00000493085 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
GPM6B-209ENST00000493085 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
GPM6B-209ENST00000493085 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
GPM6B-209ENST00000493085 DENND4BO75064 1496 aaPredicted RBP16.65■□□□□ 0.26
GPM6B-209ENST00000493085 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
GPM6B-209ENST00000493085 ARHGAP5Q13017 1502 aa16.64■□□□□ 0.25
GPM6B-209ENST00000493085 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
GPM6B-209ENST00000493085 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
GPM6B-209ENST00000493085 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
GPM6B-209ENST00000493085 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
GPM6B-209ENST00000493085 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms