RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CUL7Q14999 1698 aa20.29■□□□□ 0.84
MDC1-207ENST00000492462 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
MDC1-207ENST00000492462 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
MDC1-207ENST00000492462 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
MDC1-207ENST00000492462 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
MDC1-207ENST00000492462 KIAA0586Q9BVV6 1533 aa20.17■□□□□ 0.82
MDC1-207ENST00000492462 RAPGEF2Q9Y4G8 1499 aa20.07■□□□□ 0.8
MDC1-207ENST00000492462 KDM4FA0A1W2PPD8 638 aa20.07■□□□□ 0.8
MDC1-207ENST00000492462 IQGAP2Q13576 1575 aa20.04■□□□□ 0.8
MDC1-207ENST00000492462 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
MDC1-207ENST00000492462 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
MDC1-207ENST00000492462 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
MDC1-207ENST00000492462 DISP1Q96F81 1524 aa19.95■□□□□ 0.78
MDC1-207ENST00000492462 KIF13AQ9H1H9 1805 aa19.94■□□□□ 0.78
MDC1-207ENST00000492462 PTPRGP23470 1445 aa19.93■□□□□ 0.78
MDC1-207ENST00000492462 CARMIL2Q6F5E8 1435 aa19.93■□□□□ 0.78
MDC1-207ENST00000492462 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
MDC1-207ENST00000492462 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
MDC1-207ENST00000492462 TNIKQ9UKE5 1360 aa19.92■□□□□ 0.78
MDC1-207ENST00000492462 CSRNP3Q8WYN3 585 aa19.88■□□□□ 0.77
MDC1-207ENST00000492462 KIAA0556O60303 1618 aa19.87■□□□□ 0.77
MDC1-207ENST00000492462 NPM1P06748 294 aaKnown RBP eCLIP19.86■□□□□ 0.77
MDC1-207ENST00000492462 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
MDC1-207ENST00000492462 FAM9AQ8IZU1 332 aaPredicted RBP19.84■□□□□ 0.77
MDC1-207ENST00000492462 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
MDC1-207ENST00000492462 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
MDC1-207ENST00000492462 EEA1Q15075 1411 aa19.8■□□□□ 0.76
MDC1-207ENST00000492462 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
MDC1-207ENST00000492462 ABCC2Q92887 1545 aa19.79■□□□□ 0.76
MDC1-207ENST00000492462 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
MDC1-207ENST00000492462 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
MDC1-207ENST00000492462 UHRF1BP1LA0JNW5 1464 aa19.78■□□□□ 0.76
MDC1-207ENST00000492462 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
MDC1-207ENST00000492462 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
MDC1-207ENST00000492462 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
MDC1-207ENST00000492462 KDM6BO15054 1643 aa19.72■□□□□ 0.75
MDC1-207ENST00000492462 PLB1Q6P1J6 1458 aa19.72■□□□□ 0.75
MDC1-207ENST00000492462 ASXL2Q76L83 1435 aa19.7■□□□□ 0.74
MDC1-207ENST00000492462 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
MDC1-207ENST00000492462 KDM5BQ9UGL1 1544 aa19.7■□□□□ 0.74
MDC1-207ENST00000492462 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
MDC1-207ENST00000492462 TSPOAP1O95153 1857 aa19.68■□□□□ 0.74
MDC1-207ENST00000492462 KIF21BO75037 1637 aa19.68■□□□□ 0.74
MDC1-207ENST00000492462 ABCA8O94911 1581 aa19.67■□□□□ 0.74
MDC1-207ENST00000492462 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
MDC1-207ENST00000492462 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
MDC1-207ENST00000492462 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
MDC1-207ENST00000492462 ADGRL1O94910 1474 aa19.61■□□□□ 0.73
MDC1-207ENST00000492462 GLI2P10070 1586 aa19.6■□□□□ 0.73
MDC1-207ENST00000492462 LMTK3Q96Q04 1460 aa19.6■□□□□ 0.73
MDC1-207ENST00000492462 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
MDC1-207ENST00000492462 PPRC1Q5VV67 1664 aaKnown RBP19.57■□□□□ 0.72
MDC1-207ENST00000492462 ARID3CA6NKF2 412 aa19.57■□□□□ 0.72
MDC1-207ENST00000492462 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
MDC1-207ENST00000492462 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
MDC1-207ENST00000492462 MAP3K4Q9Y6R4 1608 aa19.52■□□□□ 0.72
MDC1-207ENST00000492462 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
MDC1-207ENST00000492462 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
MDC1-207ENST00000492462 ATP10BO94823 1461 aa19.51■□□□□ 0.71
MDC1-207ENST00000492462 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
MDC1-207ENST00000492462 KCNH8Q96L42 1107 aa19.48■□□□□ 0.71
MDC1-207ENST00000492462 SOCS7O14512 581 aa19.46■□□□□ 0.71
MDC1-207ENST00000492462 NUP153P49790 1475 aaKnown RBP19.46■□□□□ 0.71
MDC1-207ENST00000492462 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
MDC1-207ENST00000492462 CFAP43Q8NDM7 1665 aa19.41■□□□□ 0.7
MDC1-207ENST00000492462 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
MDC1-207ENST00000492462 CD109Q6YHK3 1445 aa19.4■□□□□ 0.7
MDC1-207ENST00000492462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.69
MDC1-207ENST00000492462 HNRNPUL2Q1KMD3 747 aaKnown RBP19.39■□□□□ 0.69
MDC1-207ENST00000492462 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
MDC1-207ENST00000492462 ILDR2Q71H61 639 aa19.38■□□□□ 0.69
MDC1-207ENST00000492462 MAGI3Q5TCQ9 1506 aa19.36■□□□□ 0.69
MDC1-207ENST00000492462 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
MDC1-207ENST00000492462 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
MDC1-207ENST00000492462 FMN1Q68DA7 1419 aa19.29■□□□□ 0.68
MDC1-207ENST00000492462 PLEKHD1A6NEE1 506 aa19.27■□□□□ 0.68
MDC1-207ENST00000492462 ATP1B4Q9UN42 357 aaPredicted RBP19.27■□□□□ 0.68
MDC1-207ENST00000492462 HECW1Q76N89 1606 aa19.25■□□□□ 0.67
MDC1-207ENST00000492462 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
MDC1-207ENST00000492462 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
MDC1-207ENST00000492462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
MDC1-207ENST00000492462 TTC37Q6PGP7 1564 aa19.21■□□□□ 0.67
MDC1-207ENST00000492462 ARAP3Q8WWN8 1544 aa19.2■□□□□ 0.66
MDC1-207ENST00000492462 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
MDC1-207ENST00000492462 CLIP1P30622 1438 aa19.18■□□□□ 0.66
MDC1-207ENST00000492462 NEO1Q92859 1461 aa19.17■□□□□ 0.66
MDC1-207ENST00000492462 CASKIN1Q8WXD9 1431 aa19.15■□□□□ 0.66
MDC1-207ENST00000492462 KIF14Q15058 1648 aa19.14■□□□□ 0.66
MDC1-207ENST00000492462 RAPGEF3O95398 923 aa19.14■□□□□ 0.65
MDC1-207ENST00000492462 PHLDB1Q86UU1 1377 aa19.14■□□□□ 0.65
MDC1-207ENST00000492462 FRMPD1Q5SYB0 1578 aa19.12■□□□□ 0.65
MDC1-207ENST00000492462 FANCAO15360 1455 aa19.11■□□□□ 0.65
MDC1-207ENST00000492462 TROQ12816 1431 aaPredicted RBP19.1■□□□□ 0.65
MDC1-207ENST00000492462 AKNAQ7Z591 1439 aa19.09■□□□□ 0.65
MDC1-207ENST00000492462 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
MDC1-207ENST00000492462 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
MDC1-207ENST00000492462 PLCH2O75038 1416 aa19.08■□□□□ 0.64
MDC1-207ENST00000492462 MYO5CQ9NQX4 1742 aa19.07■□□□□ 0.64
MDC1-207ENST00000492462 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
MDC1-207ENST00000492462 RICTORQ6R327 1708 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms