RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
USF1-206ENST00000491629 ADCY10Q96PN6 1610 aa23.78■■□□□ 1.4
USF1-206ENST00000491629 ABCC10Q5T3U5 1492 aa23.76■■□□□ 1.39
USF1-206ENST00000491629 DIP2BQ9P265 1576 aa23.75■■□□□ 1.39
USF1-206ENST00000491629 MAPKBP1O60336 1514 aa23.74■■□□□ 1.39
USF1-206ENST00000491629 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
USF1-206ENST00000491629 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
USF1-206ENST00000491629 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
USF1-206ENST00000491629 IGF1RP08069 1367 aa23.65■■□□□ 1.38
USF1-206ENST00000491629 CUL7Q14999 1698 aa23.63■■□□□ 1.37
USF1-206ENST00000491629 NPM1P06748 294 aaKnown RBP eCLIP23.59■■□□□ 1.37
USF1-206ENST00000491629 KDM6BO15054 1643 aa23.59■■□□□ 1.37
USF1-206ENST00000491629 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
USF1-206ENST00000491629 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.36
USF1-206ENST00000491629 PPRC1Q5VV67 1664 aaKnown RBP23.5■■□□□ 1.35
USF1-206ENST00000491629 PTPRGP23470 1445 aa23.46■■□□□ 1.35
USF1-206ENST00000491629 CARMIL1Q5VZK9 1371 aa23.44■■□□□ 1.34
USF1-206ENST00000491629 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
USF1-206ENST00000491629 IQGAP2Q13576 1575 aa23.41■■□□□ 1.34
USF1-206ENST00000491629 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
USF1-206ENST00000491629 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
USF1-206ENST00000491629 GLI2P10070 1586 aa23.39■■□□□ 1.33
USF1-206ENST00000491629 ASXL2Q76L83 1435 aa23.38■■□□□ 1.33
USF1-206ENST00000491629 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
USF1-206ENST00000491629 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
USF1-206ENST00000491629 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
USF1-206ENST00000491629 PLB1Q6P1J6 1458 aa23.33■■□□□ 1.33
USF1-206ENST00000491629 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
USF1-206ENST00000491629 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
USF1-206ENST00000491629 UACAQ9BZF9 1416 aa23.29■■□□□ 1.32
USF1-206ENST00000491629 ZCCHC11Q5TAX3 1644 aaKnown RBP23.27■■□□□ 1.32
USF1-206ENST00000491629 KDM5BQ9UGL1 1544 aa23.27■■□□□ 1.32
USF1-206ENST00000491629 EPRSP07814 1512 aaKnown RBP23.26■■□□□ 1.31
USF1-206ENST00000491629 UGGT2Q9NYU1 1516 aa23.26■■□□□ 1.31
USF1-206ENST00000491629 ADGRL1O94910 1474 aa23.23■■□□□ 1.31
USF1-206ENST00000491629 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
USF1-206ENST00000491629 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
USF1-206ENST00000491629 CTTNBP2Q8WZ74 1663 aa23.14■■□□□ 1.29
USF1-206ENST00000491629 TEX14Q8IWB6 1497 aa23.11■■□□□ 1.29
USF1-206ENST00000491629 ILDR1Q86SU0 546 aaPredicted RBP23.1■■□□□ 1.29
USF1-206ENST00000491629 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
USF1-206ENST00000491629 CFAP43Q8NDM7 1665 aa23.05■■□□□ 1.28
USF1-206ENST00000491629 ABCA8O94911 1581 aa23.05■■□□□ 1.28
USF1-206ENST00000491629 HECW2Q9P2P5 1572 aa23.05■■□□□ 1.28
USF1-206ENST00000491629 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
USF1-206ENST00000491629 CD109Q6YHK3 1445 aa22.96■■□□□ 1.27
USF1-206ENST00000491629 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
USF1-206ENST00000491629 KIF21BO75037 1637 aa22.93■■□□□ 1.26
USF1-206ENST00000491629 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
USF1-206ENST00000491629 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
USF1-206ENST00000491629 ARAP3Q8WWN8 1544 aa22.83■■□□□ 1.25
USF1-206ENST00000491629 ATP10BO94823 1461 aa22.82■■□□□ 1.24
USF1-206ENST00000491629 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
USF1-206ENST00000491629 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
USF1-206ENST00000491629 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
USF1-206ENST00000491629 ADAMTSL3P82987 1691 aa22.77■■□□□ 1.24
USF1-206ENST00000491629 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
USF1-206ENST00000491629 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
USF1-206ENST00000491629 FRMPD1Q5SYB0 1578 aa22.72■■□□□ 1.23
USF1-206ENST00000491629 BCORL1Q5H9F3 1711 aa22.68■■□□□ 1.22
USF1-206ENST00000491629 PTPRMP28827 1452 aa22.67■■□□□ 1.22
USF1-206ENST00000491629 RAPGEF3O95398 923 aa22.67■■□□□ 1.22
USF1-206ENST00000491629 NEO1Q92859 1461 aa22.65■■□□□ 1.22
USF1-206ENST00000491629 PHLDB1Q86UU1 1377 aa22.64■■□□□ 1.22
USF1-206ENST00000491629 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
USF1-206ENST00000491629 MADDQ8WXG6 1647 aa22.63■■□□□ 1.21
USF1-206ENST00000491629 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
USF1-206ENST00000491629 CSRNP3Q8WYN3 585 aa22.58■■□□□ 1.21
USF1-206ENST00000491629 SIGLEC1Q9BZZ2 1709 aa22.57■■□□□ 1.2
USF1-206ENST00000491629 ARHGEF40Q8TER5 1519 aa22.55■■□□□ 1.2
USF1-206ENST00000491629 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
USF1-206ENST00000491629 RIMS1Q86UR5 1692 aaKnown RBP22.55■■□□□ 1.2
USF1-206ENST00000491629 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
USF1-206ENST00000491629 PCF11O94913 1555 aaKnown RBP22.53■■□□□ 1.2
USF1-206ENST00000491629 LMTK3Q96Q04 1460 aa22.53■■□□□ 1.2
USF1-206ENST00000491629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.2
USF1-206ENST00000491629 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
USF1-206ENST00000491629 FBXO41Q8TF61 875 aa22.52■■□□□ 1.2
USF1-206ENST00000491629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.51■■□□□ 1.19
USF1-206ENST00000491629 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
USF1-206ENST00000491629 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
USF1-206ENST00000491629 AKNAQ7Z591 1439 aa22.47■■□□□ 1.19
USF1-206ENST00000491629 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
USF1-206ENST00000491629 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
USF1-206ENST00000491629 FANCAO15360 1455 aa22.45■■□□□ 1.18
USF1-206ENST00000491629 CFAP74Q9C0B2 1584 aa22.45■■□□□ 1.18
USF1-206ENST00000491629 ZMYM4Q5VZL5 1548 aa22.44■■□□□ 1.18
USF1-206ENST00000491629 YEATS2Q9ULM3 1422 aa22.41■■□□□ 1.18
USF1-206ENST00000491629 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
USF1-206ENST00000491629 CDK13Q14004 1512 aaKnown RBP22.4■■□□□ 1.18
USF1-206ENST00000491629 EEA1Q15075 1411 aa22.39■■□□□ 1.17
USF1-206ENST00000491629 HECW1Q76N89 1606 aa22.39■■□□□ 1.17
USF1-206ENST00000491629 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
USF1-206ENST00000491629 ZFYVE16Q7Z3T8 1539 aa22.38■■□□□ 1.17
USF1-206ENST00000491629 FER1L4A9Z1Z3 1794 aa22.38■■□□□ 1.17
USF1-206ENST00000491629 HSPA2P54652 639 aa22.35■■□□□ 1.17
USF1-206ENST00000491629 MAGI2Q86UL8 1455 aa22.31■■□□□ 1.16
USF1-206ENST00000491629 PLCH2O75038 1416 aa22.3■■□□□ 1.16
USF1-206ENST00000491629 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
USF1-206ENST00000491629 MYO5CQ9NQX4 1742 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms