RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 DIP2BQ9P265 1576 aa25.09■■□□□ 1.61
NCK1-211ENST00000491539 PRG4Q92954 1404 aaPredicted RBP25.08■■□□□ 1.61
NCK1-211ENST00000491539 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
NCK1-211ENST00000491539 TSPOAP1O95153 1857 aa24.99■■□□□ 1.59
NCK1-211ENST00000491539 ABCC10Q5T3U5 1492 aa24.96■■□□□ 1.59
NCK1-211ENST00000491539 KDM6BO15054 1643 aa24.9■■□□□ 1.58
NCK1-211ENST00000491539 CUL7Q14999 1698 aa24.9■■□□□ 1.58
NCK1-211ENST00000491539 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
NCK1-211ENST00000491539 PPRC1Q5VV67 1664 aaKnown RBP24.83■■□□□ 1.57
NCK1-211ENST00000491539 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
NCK1-211ENST00000491539 FAM69CQ0P6D2 419 aa24.77■■□□□ 1.56
NCK1-211ENST00000491539 IGF1RP08069 1367 aa24.66■■□□□ 1.54
NCK1-211ENST00000491539 IQGAP2Q13576 1575 aa24.64■■□□□ 1.54
NCK1-211ENST00000491539 KIF27Q86VH2 1401 aa24.63■■□□□ 1.53
NCK1-211ENST00000491539 ABCC2Q92887 1545 aa24.63■■□□□ 1.53
NCK1-211ENST00000491539 KDM4FA0A1W2PPD8 638 aa24.63■■□□□ 1.53
NCK1-211ENST00000491539 NPM1P06748 294 aaKnown RBP eCLIP24.6■■□□□ 1.53
NCK1-211ENST00000491539 GLI2P10070 1586 aa24.59■■□□□ 1.53
NCK1-211ENST00000491539 MAP3K4Q9Y6R4 1608 aa24.58■■□□□ 1.53
NCK1-211ENST00000491539 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
NCK1-211ENST00000491539 ASXL2Q76L83 1435 aa24.54■■□□□ 1.52
NCK1-211ENST00000491539 DISP1Q96F81 1524 aa24.54■■□□□ 1.52
NCK1-211ENST00000491539 PTPRGP23470 1445 aa24.53■■□□□ 1.52
NCK1-211ENST00000491539 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
NCK1-211ENST00000491539 ADGRL1O94910 1474 aa24.5■■□□□ 1.51
NCK1-211ENST00000491539 TNIKQ9UKE5 1360 aa24.49■■□□□ 1.51
NCK1-211ENST00000491539 UHRF1BP1LA0JNW5 1464 aa24.49■■□□□ 1.51
NCK1-211ENST00000491539 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
NCK1-211ENST00000491539 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
NCK1-211ENST00000491539 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
NCK1-211ENST00000491539 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.51
NCK1-211ENST00000491539 COL17A1Q9UMD9 1497 aaPredicted RBP24.45■■□□□ 1.51
NCK1-211ENST00000491539 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
NCK1-211ENST00000491539 EPRSP07814 1512 aaKnown RBP24.43■■□□□ 1.5
NCK1-211ENST00000491539 KDM5BQ9UGL1 1544 aa24.42■■□□□ 1.5
NCK1-211ENST00000491539 UGGT2Q9NYU1 1516 aa24.41■■□□□ 1.5
NCK1-211ENST00000491539 UACAQ9BZF9 1416 aa24.41■■□□□ 1.5
NCK1-211ENST00000491539 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
NCK1-211ENST00000491539 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
NCK1-211ENST00000491539 RAPGEF2Q9Y4G8 1499 aa24.29■■□□□ 1.48
NCK1-211ENST00000491539 TEX14Q8IWB6 1497 aa24.28■■□□□ 1.48
NCK1-211ENST00000491539 WDR7Q9Y4E6 1490 aa24.27■■□□□ 1.48
NCK1-211ENST00000491539 KIF21BO75037 1637 aa24.27■■□□□ 1.48
NCK1-211ENST00000491539 ILDR1Q86SU0 546 aaPredicted RBP24.26■■□□□ 1.47
NCK1-211ENST00000491539 ABCA8O94911 1581 aa24.24■■□□□ 1.47
NCK1-211ENST00000491539 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
NCK1-211ENST00000491539 CD109Q6YHK3 1445 aa24.05■■□□□ 1.44
NCK1-211ENST00000491539 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
NCK1-211ENST00000491539 ABCA9Q8IUA7 1624 aa24.02■■□□□ 1.44
NCK1-211ENST00000491539 FRMPD1Q5SYB0 1578 aa24.01■■□□□ 1.43
NCK1-211ENST00000491539 ADAMTSL3P82987 1691 aa24■■□□□ 1.43
NCK1-211ENST00000491539 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
NCK1-211ENST00000491539 SAMD9Q5K651 1589 aa23.98■■□□□ 1.43
NCK1-211ENST00000491539 ARAP3Q8WWN8 1544 aa23.95■■□□□ 1.43
NCK1-211ENST00000491539 BCORL1Q5H9F3 1711 aa23.93■■□□□ 1.42
NCK1-211ENST00000491539 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
NCK1-211ENST00000491539 KCNH8Q96L42 1107 aa23.92■■□□□ 1.42
NCK1-211ENST00000491539 MADDQ8WXG6 1647 aa23.92■■□□□ 1.42
NCK1-211ENST00000491539 ATP10BO94823 1461 aa23.89■■□□□ 1.42
NCK1-211ENST00000491539 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
NCK1-211ENST00000491539 SIGLEC1Q9BZZ2 1709 aa23.87■■□□□ 1.41
NCK1-211ENST00000491539 RICTORQ6R327 1708 aa23.86■■□□□ 1.41
NCK1-211ENST00000491539 RIMS1Q86UR5 1692 aaKnown RBP23.84■■□□□ 1.41
NCK1-211ENST00000491539 PTPRMP28827 1452 aa23.84■■□□□ 1.41
NCK1-211ENST00000491539 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
NCK1-211ENST00000491539 PCF11O94913 1555 aaKnown RBP23.78■■□□□ 1.4
NCK1-211ENST00000491539 NUP153P49790 1475 aaKnown RBP23.77■■□□□ 1.4
NCK1-211ENST00000491539 NEO1Q92859 1461 aa23.76■■□□□ 1.39
NCK1-211ENST00000491539 TTC37Q6PGP7 1564 aa23.75■■□□□ 1.39
NCK1-211ENST00000491539 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
NCK1-211ENST00000491539 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
NCK1-211ENST00000491539 RAPGEF3O95398 923 aa23.7■■□□□ 1.38
NCK1-211ENST00000491539 CFAP74Q9C0B2 1584 aa23.69■■□□□ 1.38
NCK1-211ENST00000491539 FER1L4A9Z1Z3 1794 aa23.67■■□□□ 1.38
NCK1-211ENST00000491539 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
NCK1-211ENST00000491539 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
NCK1-211ENST00000491539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.38
NCK1-211ENST00000491539 PHLDB1Q86UU1 1377 aa23.64■■□□□ 1.37
NCK1-211ENST00000491539 FBXO41Q8TF61 875 aa23.59■■□□□ 1.37
NCK1-211ENST00000491539 CDK13Q14004 1512 aaKnown RBP23.58■■□□□ 1.36
NCK1-211ENST00000491539 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.36
NCK1-211ENST00000491539 FANCAO15360 1455 aa23.56■■□□□ 1.36
NCK1-211ENST00000491539 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
NCK1-211ENST00000491539 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
NCK1-211ENST00000491539 YEATS2Q9ULM3 1422 aa23.55■■□□□ 1.36
NCK1-211ENST00000491539 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
NCK1-211ENST00000491539 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
NCK1-211ENST00000491539 MYO5CQ9NQX4 1742 aa23.53■■□□□ 1.36
NCK1-211ENST00000491539 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
NCK1-211ENST00000491539 ARID4BQ4LE39 1312 aaPredicted RBP23.5■■□□□ 1.35
NCK1-211ENST00000491539 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
NCK1-211ENST00000491539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
NCK1-211ENST00000491539 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
NCK1-211ENST00000491539 KIF14Q15058 1648 aa23.48■■□□□ 1.35
NCK1-211ENST00000491539 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
NCK1-211ENST00000491539 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
NCK1-211ENST00000491539 EEA1Q15075 1411 aa23.44■■□□□ 1.34
NCK1-211ENST00000491539 POGZQ7Z3K3 1410 aa23.44■■□□□ 1.34
NCK1-211ENST00000491539 HSPA2P54652 639 aa23.43■■□□□ 1.34
NCK1-211ENST00000491539 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms