RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
LSM2-213ENST00000491421 RUSC2Q8N2Y8 1516 aa14.25□□□□□ -0.13
LSM2-213ENST00000491421 CUL7Q14999 1698 aa14.24□□□□□ -0.13
LSM2-213ENST00000491421 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
LSM2-213ENST00000491421 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
LSM2-213ENST00000491421 RAPGEF2Q9Y4G8 1499 aa14.1□□□□□ -0.15
LSM2-213ENST00000491421 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
LSM2-213ENST00000491421 CARMIL2Q6F5E8 1435 aa14.08□□□□□ -0.15
LSM2-213ENST00000491421 IQGAP2Q13576 1575 aa14.08□□□□□ -0.16
LSM2-213ENST00000491421 PTPRGP23470 1445 aa14.07□□□□□ -0.16
LSM2-213ENST00000491421 TTBK1Q5TCY1 1321 aaPredicted RBP14.06□□□□□ -0.16
LSM2-213ENST00000491421 ADCY10Q96PN6 1610 aa14.05□□□□□ -0.16
LSM2-213ENST00000491421 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
LSM2-213ENST00000491421 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
LSM2-213ENST00000491421 DISP1Q96F81 1524 aa14□□□□□ -0.17
LSM2-213ENST00000491421 ABCC10Q5T3U5 1492 aa14□□□□□ -0.17
LSM2-213ENST00000491421 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
LSM2-213ENST00000491421 UGGT2Q9NYU1 1516 aa14□□□□□ -0.17
LSM2-213ENST00000491421 PRXQ9BXM0 1461 aa13.98□□□□□ -0.17
LSM2-213ENST00000491421 ABCC2Q92887 1545 aa13.96□□□□□ -0.17
LSM2-213ENST00000491421 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
LSM2-213ENST00000491421 DIP2BQ9P265 1576 aa13.96□□□□□ -0.18
LSM2-213ENST00000491421 UACAQ9BZF9 1416 aa13.95□□□□□ -0.18
LSM2-213ENST00000491421 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
LSM2-213ENST00000491421 KIAA0556O60303 1618 aa13.94□□□□□ -0.18
LSM2-213ENST00000491421 GOLGA3Q08378 1498 aa13.92□□□□□ -0.18
LSM2-213ENST00000491421 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
LSM2-213ENST00000491421 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
LSM2-213ENST00000491421 ASXL2Q76L83 1435 aa13.9□□□□□ -0.18
LSM2-213ENST00000491421 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
LSM2-213ENST00000491421 KDM5BQ9UGL1 1544 aa13.88□□□□□ -0.19
LSM2-213ENST00000491421 EEA1Q15075 1411 aa13.88□□□□□ -0.19
LSM2-213ENST00000491421 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
LSM2-213ENST00000491421 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
LSM2-213ENST00000491421 GLI2P10070 1586 aa13.83□□□□□ -0.2
LSM2-213ENST00000491421 ZCCHC11Q5TAX3 1644 aaKnown RBP13.82□□□□□ -0.2
LSM2-213ENST00000491421 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
LSM2-213ENST00000491421 P3H3Q8IVL6 736 aa13.81□□□□□ -0.2
LSM2-213ENST00000491421 ABCA8O94911 1581 aa13.8□□□□□ -0.2
LSM2-213ENST00000491421 KDM6BO15054 1643 aa13.8□□□□□ -0.2
LSM2-213ENST00000491421 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
LSM2-213ENST00000491421 WDR7Q9Y4E6 1490 aa13.79□□□□□ -0.2
LSM2-213ENST00000491421 SAMD9Q5K651 1589 aa13.75□□□□□ -0.21
LSM2-213ENST00000491421 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
LSM2-213ENST00000491421 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
LSM2-213ENST00000491421 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
LSM2-213ENST00000491421 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
LSM2-213ENST00000491421 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
LSM2-213ENST00000491421 KIF21BO75037 1637 aa13.73□□□□□ -0.21
LSM2-213ENST00000491421 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
LSM2-213ENST00000491421 ATP10BO94823 1461 aa13.7□□□□□ -0.22
LSM2-213ENST00000491421 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
LSM2-213ENST00000491421 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
LSM2-213ENST00000491421 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
LSM2-213ENST00000491421 EHMT2Q96KQ7 1210 aa13.68□□□□□ -0.22
LSM2-213ENST00000491421 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
LSM2-213ENST00000491421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
LSM2-213ENST00000491421 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
LSM2-213ENST00000491421 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
LSM2-213ENST00000491421 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
LSM2-213ENST00000491421 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
LSM2-213ENST00000491421 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.22
LSM2-213ENST00000491421 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
LSM2-213ENST00000491421 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
LSM2-213ENST00000491421 ABCA9Q8IUA7 1624 aa13.59□□□□□ -0.23
LSM2-213ENST00000491421 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
LSM2-213ENST00000491421 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
LSM2-213ENST00000491421 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
LSM2-213ENST00000491421 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
LSM2-213ENST00000491421 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
LSM2-213ENST00000491421 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
LSM2-213ENST00000491421 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
LSM2-213ENST00000491421 NEO1Q92859 1461 aa13.53□□□□□ -0.24
LSM2-213ENST00000491421 CDK13Q14004 1512 aaKnown RBP13.53□□□□□ -0.24
LSM2-213ENST00000491421 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
LSM2-213ENST00000491421 RAPGEF3O95398 923 aa13.49□□□□□ -0.25
LSM2-213ENST00000491421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■□□□□ 9.2
LSM2-213ENST00000491421 TTC37Q6PGP7 1564 aa13.47□□□□□ -0.25
LSM2-213ENST00000491421 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
LSM2-213ENST00000491421 FANCAO15360 1455 aa13.47□□□□□ -0.25
LSM2-213ENST00000491421 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
LSM2-213ENST00000491421 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
LSM2-213ENST00000491421 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
LSM2-213ENST00000491421 CFAP74Q9C0B2 1584 aa13.43□□□□□ -0.26
LSM2-213ENST00000491421 PLCH2O75038 1416 aa13.42□□□□□ -0.26
LSM2-213ENST00000491421 CLIP1P30622 1438 aa13.42□□□□□ -0.26
LSM2-213ENST00000491421 TROQ12816 1431 aaPredicted RBP13.42□□□□□ -0.26
LSM2-213ENST00000491421 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
LSM2-213ENST00000491421 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
LSM2-213ENST00000491421 CCDC18Q5T9S5 1454 aa13.4□□□□□ -0.26
LSM2-213ENST00000491421 KIF14Q15058 1648 aa13.39□□□□□ -0.27
LSM2-213ENST00000491421 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
LSM2-213ENST00000491421 EFCAB2Q5VUJ9 269 aa13.38□□□□□ -0.27
LSM2-213ENST00000491421 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
LSM2-213ENST00000491421 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
LSM2-213ENST00000491421 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
LSM2-213ENST00000491421 RICTORQ6R327 1708 aa13.36□□□□□ -0.27
LSM2-213ENST00000491421 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
LSM2-213ENST00000491421 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
LSM2-213ENST00000491421 ARHGAP5Q13017 1502 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms