RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
APP-216ENST00000491395 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
APP-216ENST00000491395 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
APP-216ENST00000491395 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
APP-216ENST00000491395 CUL7Q14999 1698 aa14.26□□□□□ -0.13
APP-216ENST00000491395 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
APP-216ENST00000491395 FAM69CQ0P6D2 419 aa14.23□□□□□ -0.13
APP-216ENST00000491395 PTPRGP23470 1445 aa14.23□□□□□ -0.13
APP-216ENST00000491395 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
APP-216ENST00000491395 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
APP-216ENST00000491395 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
APP-216ENST00000491395 ADCY10Q96PN6 1610 aa14.17□□□□□ -0.14
APP-216ENST00000491395 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
APP-216ENST00000491395 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
APP-216ENST00000491395 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
APP-216ENST00000491395 AEBP2Q6ZN18 517 aaPredicted RBP14.14□□□□□ -0.15
APP-216ENST00000491395 DISP1Q96F81 1524 aa14.12□□□□□ -0.15
APP-216ENST00000491395 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
APP-216ENST00000491395 ABCC2Q92887 1545 aa14.09□□□□□ -0.15
APP-216ENST00000491395 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
APP-216ENST00000491395 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
APP-216ENST00000491395 UGGT2Q9NYU1 1516 aa14.08□□□□□ -0.16
APP-216ENST00000491395 ASXL2Q76L83 1435 aa14.07□□□□□ -0.16
APP-216ENST00000491395 UHRF1BP1LA0JNW5 1464 aa14.06□□□□□ -0.16
APP-216ENST00000491395 PRXQ9BXM0 1461 aa14.05□□□□□ -0.16
APP-216ENST00000491395 PLB1Q6P1J6 1458 aa14.04□□□□□ -0.16
APP-216ENST00000491395 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
APP-216ENST00000491395 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
APP-216ENST00000491395 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
APP-216ENST00000491395 P3H3Q8IVL6 736 aa13.98□□□□□ -0.17
APP-216ENST00000491395 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
APP-216ENST00000491395 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
APP-216ENST00000491395 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
APP-216ENST00000491395 GLI2P10070 1586 aa13.95□□□□□ -0.18
APP-216ENST00000491395 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
APP-216ENST00000491395 KDM6BO15054 1643 aa13.94□□□□□ -0.18
APP-216ENST00000491395 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
APP-216ENST00000491395 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
APP-216ENST00000491395 ARID3CA6NKF2 412 aa13.92□□□□□ -0.18
APP-216ENST00000491395 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
APP-216ENST00000491395 WDR7Q9Y4E6 1490 aa13.91□□□□□ -0.18
APP-216ENST00000491395 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
APP-216ENST00000491395 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
APP-216ENST00000491395 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
APP-216ENST00000491395 ABCA8O94911 1581 aa13.9□□□□□ -0.18
APP-216ENST00000491395 EEA1Q15075 1411 aa13.88□□□□□ -0.19
APP-216ENST00000491395 PPRC1Q5VV67 1664 aaKnown RBP13.87□□□□□ -0.19
APP-216ENST00000491395 CD109Q6YHK3 1445 aa13.85□□□□□ -0.19
APP-216ENST00000491395 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
APP-216ENST00000491395 MAP3K4Q9Y6R4 1608 aa13.84□□□□□ -0.19
APP-216ENST00000491395 ATP10BO94823 1461 aa13.84□□□□□ -0.19
APP-216ENST00000491395 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
APP-216ENST00000491395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
APP-216ENST00000491395 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
APP-216ENST00000491395 EHMT2Q96KQ7 1210 aa13.82□□□□□ -0.2
APP-216ENST00000491395 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
APP-216ENST00000491395 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
APP-216ENST00000491395 SAMD9Q5K651 1589 aa13.79□□□□□ -0.2
APP-216ENST00000491395 UBTFP17480 764 aaKnown RBP13.76□□□□□ -0.21
APP-216ENST00000491395 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
APP-216ENST00000491395 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
APP-216ENST00000491395 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
APP-216ENST00000491395 PLEKHD1A6NEE1 506 aa13.73□□□□□ -0.21
APP-216ENST00000491395 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
APP-216ENST00000491395 KIF21BO75037 1637 aa13.72□□□□□ -0.21
APP-216ENST00000491395 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
APP-216ENST00000491395 PHLDB1Q86UU1 1377 aa13.69□□□□□ -0.22
APP-216ENST00000491395 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
APP-216ENST00000491395 ATP1B4Q9UN42 357 aaPredicted RBP13.68□□□□□ -0.22
APP-216ENST00000491395 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
APP-216ENST00000491395 ABCA9Q8IUA7 1624 aa13.67□□□□□ -0.22
APP-216ENST00000491395 NEO1Q92859 1461 aa13.65□□□□□ -0.22
APP-216ENST00000491395 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
APP-216ENST00000491395 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
APP-216ENST00000491395 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
APP-216ENST00000491395 AKNAQ7Z591 1439 aa13.59□□□□□ -0.23
APP-216ENST00000491395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
APP-216ENST00000491395 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
APP-216ENST00000491395 FANCAO15360 1455 aa13.57□□□□□ -0.24
APP-216ENST00000491395 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
APP-216ENST00000491395 CDK11AQ9UQ88 783 aaPredicted RBP13.57□□□□□ -0.24
APP-216ENST00000491395 PLCH2O75038 1416 aa13.55□□□□□ -0.24
APP-216ENST00000491395 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
APP-216ENST00000491395 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
APP-216ENST00000491395 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
APP-216ENST00000491395 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
APP-216ENST00000491395 HECW1Q76N89 1606 aa13.52□□□□□ -0.25
APP-216ENST00000491395 HECW2Q9P2P5 1572 aa13.5□□□□□ -0.25
APP-216ENST00000491395 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
APP-216ENST00000491395 PTPRMP28827 1452 aa13.49□□□□□ -0.25
APP-216ENST00000491395 YEATS2Q9ULM3 1422 aa13.49□□□□□ -0.25
APP-216ENST00000491395 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
APP-216ENST00000491395 MLECQ14165 292 aa13.47□□□□□ -0.25
APP-216ENST00000491395 CLIP1P30622 1438 aa13.47□□□□□ -0.25
APP-216ENST00000491395 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
APP-216ENST00000491395 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
APP-216ENST00000491395 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
APP-216ENST00000491395 ADAMTSL3P82987 1691 aa13.46□□□□□ -0.26
APP-216ENST00000491395 ARHGEF40Q8TER5 1519 aa13.45□□□□□ -0.26
APP-216ENST00000491395 RICTORQ6R327 1708 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms