RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 RUSC2Q8N2Y8 1516 aa31.21■■■□□ 2.59
GGA1-223ENST00000491295 CUL7Q14999 1698 aa31.19■■■□□ 2.58
GGA1-223ENST00000491295 KIAA0586Q9BVV6 1533 aa31.16■■■□□ 2.58
GGA1-223ENST00000491295 CARMIL1Q5VZK9 1371 aa31.06■■■□□ 2.56
GGA1-223ENST00000491295 NPM1P06748 294 aaKnown RBP eCLIP31.05■■■□□ 2.56
GGA1-223ENST00000491295 MAPKBP1O60336 1514 aa30.91■■■□□ 2.54
GGA1-223ENST00000491295 KIF13AQ9H1H9 1805 aa30.91■■■□□ 2.54
GGA1-223ENST00000491295 ADCY10Q96PN6 1610 aa30.88■■■□□ 2.53
GGA1-223ENST00000491295 CARMIL2Q6F5E8 1435 aa30.88■■■□□ 2.53
GGA1-223ENST00000491295 ABCC10Q5T3U5 1492 aa30.88■■■□□ 2.53
GGA1-223ENST00000491295 PTPRGP23470 1445 aa30.86■■■□□ 2.53
GGA1-223ENST00000491295 FAM69CQ0P6D2 419 aa30.85■■■□□ 2.53
GGA1-223ENST00000491295 TNIKQ9UKE5 1360 aa30.81■■■□□ 2.52
GGA1-223ENST00000491295 IQGAP2Q13576 1575 aa30.81■■■□□ 2.52
GGA1-223ENST00000491295 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
GGA1-223ENST00000491295 RAPGEF2Q9Y4G8 1499 aa30.78■■■□□ 2.52
GGA1-223ENST00000491295 DIP2BQ9P265 1576 aa30.74■■■□□ 2.51
GGA1-223ENST00000491295 TTBK1Q5TCY1 1321 aaPredicted RBP30.67■■■□□ 2.5
GGA1-223ENST00000491295 ABCC2Q92887 1545 aa30.67■■■□□ 2.5
GGA1-223ENST00000491295 UHRF1BP1LA0JNW5 1464 aa30.65■■■□□ 2.5
GGA1-223ENST00000491295 DISP1Q96F81 1524 aa30.65■■■□□ 2.5
GGA1-223ENST00000491295 UGGT2Q9NYU1 1516 aa30.65■■■□□ 2.5
GGA1-223ENST00000491295 UACAQ9BZF9 1416 aa30.62■■■□□ 2.49
GGA1-223ENST00000491295 PLB1Q6P1J6 1458 aa30.58■■■□□ 2.49
GGA1-223ENST00000491295 ASXL2Q76L83 1435 aa30.54■■■□□ 2.48
GGA1-223ENST00000491295 KIAA0556O60303 1618 aa30.5■■■□□ 2.47
GGA1-223ENST00000491295 KDM5BQ9UGL1 1544 aa30.49■■■□□ 2.47
GGA1-223ENST00000491295 GLI2P10070 1586 aa30.48■■■□□ 2.47
GGA1-223ENST00000491295 KDM6BO15054 1643 aa30.47■■■□□ 2.47
GGA1-223ENST00000491295 TSPOAP1O95153 1857 aa30.47■■■□□ 2.47
GGA1-223ENST00000491295 PRXQ9BXM0 1461 aa30.47■■■□□ 2.47
GGA1-223ENST00000491295 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
GGA1-223ENST00000491295 GOLGA3Q08378 1498 aa30.45■■■□□ 2.47
GGA1-223ENST00000491295 EPRSP07814 1512 aaKnown RBP30.35■■■□□ 2.45
GGA1-223ENST00000491295 ZCCHC11Q5TAX3 1644 aaKnown RBP30.35■■■□□ 2.45
GGA1-223ENST00000491295 FAM9AQ8IZU1 332 aaPredicted RBP30.32■■■□□ 2.44
GGA1-223ENST00000491295 CSRNP3Q8WYN3 585 aa30.29■■■□□ 2.44
GGA1-223ENST00000491295 PPRC1Q5VV67 1664 aaKnown RBP30.29■■■□□ 2.44
GGA1-223ENST00000491295 TEX14Q8IWB6 1497 aa30.26■■■□□ 2.44
GGA1-223ENST00000491295 MAP3K4Q9Y6R4 1608 aa30.26■■■□□ 2.44
GGA1-223ENST00000491295 WDR7Q9Y4E6 1490 aa30.25■■■□□ 2.43
GGA1-223ENST00000491295 ABCA8O94911 1581 aa30.25■■■□□ 2.43
GGA1-223ENST00000491295 EEA1Q15075 1411 aa30.2■■■□□ 2.42
GGA1-223ENST00000491295 KDM4FA0A1W2PPD8 638 aa30.17■■■□□ 2.42
GGA1-223ENST00000491295 COL17A1Q9UMD9 1497 aaPredicted RBP30.12■■■□□ 2.41
GGA1-223ENST00000491295 KCNH8Q96L42 1107 aa30.1■■■□□ 2.41
GGA1-223ENST00000491295 CD109Q6YHK3 1445 aa30.09■■■□□ 2.41
GGA1-223ENST00000491295 MAGI3Q5TCQ9 1506 aa30.08■■■□□ 2.41
GGA1-223ENST00000491295 P3H3Q8IVL6 736 aa30.08■■■□□ 2.41
GGA1-223ENST00000491295 CFAP43Q8NDM7 1665 aa30.07■■■□□ 2.4
GGA1-223ENST00000491295 SAMD9Q5K651 1589 aa30.04■■■□□ 2.4
GGA1-223ENST00000491295 ATP10BO94823 1461 aa30.03■■■□□ 2.4
GGA1-223ENST00000491295 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
GGA1-223ENST00000491295 ARID3CA6NKF2 412 aa29.92■■■□□ 2.38
GGA1-223ENST00000491295 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
GGA1-223ENST00000491295 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
GGA1-223ENST00000491295 KIF21BO75037 1637 aa29.86■■■□□ 2.37
GGA1-223ENST00000491295 ARAP3Q8WWN8 1544 aa29.86■■■□□ 2.37
GGA1-223ENST00000491295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.85■■■□□ 2.37
GGA1-223ENST00000491295 HNRNPUL2Q1KMD3 747 aaKnown RBP29.85■■■□□ 2.37
GGA1-223ENST00000491295 ABCA9Q8IUA7 1624 aa29.85■■■□□ 2.37
GGA1-223ENST00000491295 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
GGA1-223ENST00000491295 NUP153P49790 1475 aaKnown RBP29.81■■■□□ 2.36
GGA1-223ENST00000491295 FHOD3Q2V2M9 1422 aa29.81■■■□□ 2.36
GGA1-223ENST00000491295 EFCAB5A4FU69 1503 aa29.81■■■□□ 2.36
GGA1-223ENST00000491295 PLEKHD1A6NEE1 506 aa29.77■■■□□ 2.36
GGA1-223ENST00000491295 NEO1Q92859 1461 aa29.74■■■□□ 2.35
GGA1-223ENST00000491295 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
GGA1-223ENST00000491295 UBTFP17480 764 aaKnown RBP29.68■■■□□ 2.34
GGA1-223ENST00000491295 RAPGEF3O95398 923 aa29.62■■■□□ 2.33
GGA1-223ENST00000491295 FMN1Q68DA7 1419 aa29.58■■■□□ 2.33
GGA1-223ENST00000491295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.54■■■□□ 2.32
GGA1-223ENST00000491295 CFAP74Q9C0B2 1584 aa29.52■■■□□ 2.32
GGA1-223ENST00000491295 AKNAQ7Z591 1439 aa29.52■■■□□ 2.32
GGA1-223ENST00000491295 FANCAO15360 1455 aa29.51■■■□□ 2.31
GGA1-223ENST00000491295 DENND4BO75064 1496 aaPredicted RBP29.51■■■□□ 2.31
GGA1-223ENST00000491295 ARHGAP35Q9NRY4 1499 aa29.5■■■□□ 2.31
GGA1-223ENST00000491295 EHMT2Q96KQ7 1210 aa29.5■■■□□ 2.31
GGA1-223ENST00000491295 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
GGA1-223ENST00000491295 FRMPD1Q5SYB0 1578 aa29.48■■■□□ 2.31
GGA1-223ENST00000491295 CDK13Q14004 1512 aaKnown RBP29.48■■■□□ 2.31
GGA1-223ENST00000491295 ATP1B4Q9UN42 357 aaPredicted RBP29.46■■■□□ 2.31
GGA1-223ENST00000491295 HECW2Q9P2P5 1572 aa29.46■■■□□ 2.31
GGA1-223ENST00000491295 HECW1Q76N89 1606 aa29.45■■■□□ 2.31
GGA1-223ENST00000491295 TTC37Q6PGP7 1564 aa29.43■■■□□ 2.3
GGA1-223ENST00000491295 ADAMTSL3P82987 1691 aa29.42■■■□□ 2.3
GGA1-223ENST00000491295 PLCH2O75038 1416 aa29.42■■■□□ 2.3
GGA1-223ENST00000491295 RICTORQ6R327 1708 aa29.42■■■□□ 2.3
GGA1-223ENST00000491295 ARID4BQ4LE39 1312 aaPredicted RBP29.41■■■□□ 2.3
GGA1-223ENST00000491295 MAGI2Q86UL8 1455 aa29.37■■■□□ 2.29
GGA1-223ENST00000491295 PTPRMP28827 1452 aa29.36■■■□□ 2.29
GGA1-223ENST00000491295 ARHGEF40Q8TER5 1519 aa29.36■■■□□ 2.29
GGA1-223ENST00000491295 ZMYM4Q5VZL5 1548 aa29.35■■■□□ 2.29
GGA1-223ENST00000491295 BCORL1Q5H9F3 1711 aa29.35■■■□□ 2.29
GGA1-223ENST00000491295 EFCAB2Q5VUJ9 269 aa29.35■■■□□ 2.29
GGA1-223ENST00000491295 TROQ12816 1431 aaPredicted RBP29.31■■■□□ 2.28
GGA1-223ENST00000491295 SCAPERQ9BY12 1400 aa29.31■■■□□ 2.28
GGA1-223ENST00000491295 CLIP1P30622 1438 aa29.3■■■□□ 2.28
GGA1-223ENST00000491295 POGZQ7Z3K3 1410 aa29.29■■■□□ 2.28
GGA1-223ENST00000491295 ZFYVE16Q7Z3T8 1539 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms