RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 DHX57Q6P158 1386 aaKnown RBP15.2■□□□□ 0.02
CRNKL1-204ENST00000490910 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
CRNKL1-204ENST00000490910 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
CRNKL1-204ENST00000490910 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
CRNKL1-204ENST00000490910 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
CRNKL1-204ENST00000490910 CCNB3Q8WWL7 1395 aa15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 ZNF326Q5BKZ1 582 aaKnown RBP15.13■□□□□ 0.01
CRNKL1-204ENST00000490910 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
CRNKL1-204ENST00000490910 CECR2Q9BXF3 1484 aa15.12■□□□□ 0.01
CRNKL1-204ENST00000490910 MSH5O43196 834 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
CRNKL1-204ENST00000490910 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
CRNKL1-204ENST00000490910 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ 0
CRNKL1-204ENST00000490910 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
CRNKL1-204ENST00000490910 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 RAB3GAP2Q9H2M9 1393 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 ARXQ96QS3 562 aa15.03■□□□□ -0
CRNKL1-204ENST00000490910 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CRNKL1-204ENST00000490910 USP35Q9P2H5 1018 aa15□□□□□ -0.01
CRNKL1-204ENST00000490910 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
CRNKL1-204ENST00000490910 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
CRNKL1-204ENST00000490910 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
CRNKL1-204ENST00000490910 NAP1L5Q96NT1 182 aaPredicted RBP14.95□□□□□ -0.02
CRNKL1-204ENST00000490910 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
CRNKL1-204ENST00000490910 UPF2Q9HAU5 1272 aaKnown RBP14.93□□□□□ -0.02
CRNKL1-204ENST00000490910 TCERG1O14776 1098 aaKnown RBP14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 BAZ1AQ9NRL2 1556 aaPredicted RBP14.92□□□□□ -0.02
CRNKL1-204ENST00000490910 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
CRNKL1-204ENST00000490910 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
CRNKL1-204ENST00000490910 ANP32BQ92688 251 aaKnown RBP14.9□□□□□ -0.02
CRNKL1-204ENST00000490910 WIZO95785 1651 aa14.9□□□□□ -0.02
CRNKL1-204ENST00000490910 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
CRNKL1-204ENST00000490910 RSPH6AQ9H0K4 717 aa14.89□□□□□ -0.03
CRNKL1-204ENST00000490910 HSPA5P11021 654 aaKnown RBP14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 BECN1Q14457 450 aa14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.88□□□□□ -0.03
CRNKL1-204ENST00000490910 GSE1Q14687 1217 aa14.87□□□□□ -0.03
CRNKL1-204ENST00000490910 NUDCQ9Y266 331 aa14.85□□□□□ -0.03
CRNKL1-204ENST00000490910 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
CRNKL1-204ENST00000490910 TRIM44Q96DX7 344 aaPredicted RBP14.83□□□□□ -0.03
CRNKL1-204ENST00000490910 ZBED9Q6R2W3 1325 aa14.83□□□□□ -0.04
CRNKL1-204ENST00000490910 RRP7BPQ9NSQ0 103 aa14.82□□□□□ -0.04
CRNKL1-204ENST00000490910 L1TD1Q5T7N2 865 aaKnown RBP14.82□□□□□ -0.04
CRNKL1-204ENST00000490910 BAZ1BQ9UIG0 1483 aaKnown RBP14.81□□□□□ -0.04
CRNKL1-204ENST00000490910 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
CRNKL1-204ENST00000490910 PDE4AP27815 886 aa14.8□□□□□ -0.04
CRNKL1-204ENST00000490910 HSP90AA1P07900 732 aaKnown RBP14.79□□□□□ -0.04
CRNKL1-204ENST00000490910 PNNQ9H307 717 aaKnown RBP14.78□□□□□ -0.04
CRNKL1-204ENST00000490910 RGS3P49796 1198 aa14.77□□□□□ -0.04
CRNKL1-204ENST00000490910 VSIG10Q8N0Z9 540 aa14.77□□□□□ -0.05
CRNKL1-204ENST00000490910 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
CRNKL1-204ENST00000490910 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
CRNKL1-204ENST00000490910 BRPF3Q9ULD4 1205 aa14.75□□□□□ -0.05
CRNKL1-204ENST00000490910 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CRNKL1-204ENST00000490910 NACADO15069 1562 aa14.74□□□□□ -0.05
CRNKL1-204ENST00000490910 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
CRNKL1-204ENST00000490910 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 HSP90AA2PQ14568 343 aaPredicted RBP14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
CRNKL1-204ENST00000490910 PKNOX2Q96KN3 472 aa14.71□□□□□ -0.05
CRNKL1-204ENST00000490910 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 WDR43Q15061 677 aaKnown RBP eCLIP14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 MS4A1P11836 297 aa14.7□□□□□ -0.06
CRNKL1-204ENST00000490910 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
CRNKL1-204ENST00000490910 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
CRNKL1-204ENST00000490910 KIF21BO75037 1637 aa14.68□□□□□ -0.06
CRNKL1-204ENST00000490910 NFKBIBQ15653 356 aa14.67□□□□□ -0.06
CRNKL1-204ENST00000490910 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 EXOC6Q8TAG9 804 aa14.66□□□□□ -0.06
CRNKL1-204ENST00000490910 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 ARID4BQ4LE39 1312 aaPredicted RBP14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 FRAT1Q92837 279 aaPredicted RBP14.65□□□□□ -0.06
CRNKL1-204ENST00000490910 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
CRNKL1-204ENST00000490910 SLKQ9H2G2 1235 aaPredicted RBP14.63□□□□□ -0.07
CRNKL1-204ENST00000490910 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
CRNKL1-204ENST00000490910 GOLGA6L3A6NEY3 463 aa14.61□□□□□ -0.07
CRNKL1-204ENST00000490910 CARD11Q9BXL7 1154 aa14.61□□□□□ -0.07
CRNKL1-204ENST00000490910 TNNT2P45379 298 aaPredicted RBP14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 ZNF777Q9ULD5 760 aaPredicted RBP14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 FAM43AQ8N2R8 423 aa14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 L3MBTL2Q969R5 705 aa14.6□□□□□ -0.07
CRNKL1-204ENST00000490910 WASHC2AQ641Q2 1341 aa14.59□□□□□ -0.07
CRNKL1-204ENST00000490910 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
CRNKL1-204ENST00000490910 CNTLNQ9NXG0 1405 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 GOLGA6L22H0YM25 854 aa14.58□□□□□ -0.08
CRNKL1-204ENST00000490910 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
CRNKL1-204ENST00000490910 AKNAQ7Z591 1439 aa14.56□□□□□ -0.08
CRNKL1-204ENST00000490910 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
CRNKL1-204ENST00000490910 BACH2Q9BYV9 841 aa14.55□□□□□ -0.08
CRNKL1-204ENST00000490910 FOXD1Q16676 465 aa14.54□□□□□ -0.08
CRNKL1-204ENST00000490910 CCDC184Q52MB2 194 aa14.54□□□□□ -0.08
CRNKL1-204ENST00000490910 SMARCA2P51531 1590 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 RALBP1Q15311 655 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
CRNKL1-204ENST00000490910 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms