RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 CEP170Q5SW79 1584 aa9.28□□□□□ -0.92
CKAP2-207ENST00000490903 NPM1P06748 294 aaKnown RBP eCLIP9.27□□□□□ -0.92
CKAP2-207ENST00000490903 NUP160Q12769 1436 aa9.27□□□□□ -0.93
CKAP2-207ENST00000490903 ERICH3Q5RHP9 1530 aa9.26□□□□□ -0.93
CKAP2-207ENST00000490903 KIF27Q86VH2 1401 aa9.26□□□□□ -0.93
CKAP2-207ENST00000490903 IGF1RP08069 1367 aa9.26□□□□□ -0.93
CKAP2-207ENST00000490903 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
CKAP2-207ENST00000490903 FAM69CQ0P6D2 419 aa9.21□□□□□ -0.93
CKAP2-207ENST00000490903 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
CKAP2-207ENST00000490903 PTPRGP23470 1445 aa9.16□□□□□ -0.94
CKAP2-207ENST00000490903 RUSC2Q8N2Y8 1516 aa9.16□□□□□ -0.94
CKAP2-207ENST00000490903 SHROOM2Q13796 1616 aa9.15□□□□□ -0.94
CKAP2-207ENST00000490903 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
CKAP2-207ENST00000490903 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.95
CKAP2-207ENST00000490903 EHMT2Q96KQ7 1210 aa9.13□□□□□ -0.95
CKAP2-207ENST00000490903 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
CKAP2-207ENST00000490903 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
CKAP2-207ENST00000490903 CUL7Q14999 1698 aa9.12□□□□□ -0.95
CKAP2-207ENST00000490903 ARID3CA6NKF2 412 aa9.11□□□□□ -0.95
CKAP2-207ENST00000490903 TNIKQ9UKE5 1360 aa9.1□□□□□ -0.95
CKAP2-207ENST00000490903 RAPGEF2Q9Y4G8 1499 aa9.1□□□□□ -0.95
CKAP2-207ENST00000490903 KCNH8Q96L42 1107 aa9.08□□□□□ -0.96
CKAP2-207ENST00000490903 ABCC10Q5T3U5 1492 aa9.07□□□□□ -0.96
CKAP2-207ENST00000490903 IQGAP2Q13576 1575 aa9.07□□□□□ -0.96
CKAP2-207ENST00000490903 ADCY10Q96PN6 1610 aa9.07□□□□□ -0.96
CKAP2-207ENST00000490903 CSRNP3Q8WYN3 585 aa9.05□□□□□ -0.96
CKAP2-207ENST00000490903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.05□□□□□ -0.96
CKAP2-207ENST00000490903 HNRNPUL2Q1KMD3 747 aaKnown RBP9.05□□□□□ -0.96
CKAP2-207ENST00000490903 TSPOAP1O95153 1857 aa9.05□□□□□ -0.96
CKAP2-207ENST00000490903 UACAQ9BZF9 1416 aa9.04□□□□□ -0.96
CKAP2-207ENST00000490903 KIF13AQ9H1H9 1805 aa9.03□□□□□ -0.96
CKAP2-207ENST00000490903 ASXL2Q76L83 1435 aa9.03□□□□□ -0.96
CKAP2-207ENST00000490903 DISP1Q96F81 1524 aa9.02□□□□□ -0.96
CKAP2-207ENST00000490903 PLPPR3Q6T4P5 718 aa9.02□□□□□ -0.97
CKAP2-207ENST00000490903 ABCC2Q92887 1545 aa9.02□□□□□ -0.97
CKAP2-207ENST00000490903 MAPKBP1O60336 1514 aa9.01□□□□□ -0.97
CKAP2-207ENST00000490903 DIP2BQ9P265 1576 aa9□□□□□ -0.97
CKAP2-207ENST00000490903 PLB1Q6P1J6 1458 aa8.99□□□□□ -0.97
CKAP2-207ENST00000490903 ATP1B4Q9UN42 357 aaPredicted RBP8.98□□□□□ -0.97
CKAP2-207ENST00000490903 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
CKAP2-207ENST00000490903 UGGT2Q9NYU1 1516 aa8.98□□□□□ -0.97
CKAP2-207ENST00000490903 PRXQ9BXM0 1461 aa8.97□□□□□ -0.97
CKAP2-207ENST00000490903 KDM6BO15054 1643 aa8.97□□□□□ -0.97
CKAP2-207ENST00000490903 GOLGA3Q08378 1498 aa8.96□□□□□ -0.97
CKAP2-207ENST00000490903 KIAA0556O60303 1618 aa8.96□□□□□ -0.97
CKAP2-207ENST00000490903 UHRF1BP1LA0JNW5 1464 aa8.95□□□□□ -0.98
CKAP2-207ENST00000490903 KDM4FA0A1W2PPD8 638 aa8.95□□□□□ -0.98
CKAP2-207ENST00000490903 KDM5BQ9UGL1 1544 aa8.94□□□□□ -0.98
CKAP2-207ENST00000490903 EPRSP07814 1512 aaKnown RBP8.94□□□□□ -0.98
CKAP2-207ENST00000490903 CTTNBP2Q8WZ74 1663 aa8.92□□□□□ -0.98
CKAP2-207ENST00000490903 CD109Q6YHK3 1445 aa8.92□□□□□ -0.98
CKAP2-207ENST00000490903 ZCCHC11Q5TAX3 1644 aaKnown RBP8.92□□□□□ -0.98
CKAP2-207ENST00000490903 WDR7Q9Y4E6 1490 aa8.91□□□□□ -0.98
CKAP2-207ENST00000490903 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
CKAP2-207ENST00000490903 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.99
CKAP2-207ENST00000490903 PLEKHD1A6NEE1 506 aa8.89□□□□□ -0.99
CKAP2-207ENST00000490903 MSH5O43196 834 aa8.89□□□□□ -0.99
CKAP2-207ENST00000490903 TEX14Q8IWB6 1497 aa8.89□□□□□ -0.99
CKAP2-207ENST00000490903 EEA1Q15075 1411 aa8.88□□□□□ -0.99
CKAP2-207ENST00000490903 ATP10BO94823 1461 aa8.88□□□□□ -0.99
CKAP2-207ENST00000490903 GLI2P10070 1586 aa8.88□□□□□ -0.99
CKAP2-207ENST00000490903 ABCA8O94911 1581 aa8.87□□□□□ -0.99
CKAP2-207ENST00000490903 RAPGEF3O95398 923 aa8.87□□□□□ -0.99
CKAP2-207ENST00000490903 ARID4BQ4LE39 1312 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-207ENST00000490903 PPRC1Q5VV67 1664 aaKnown RBP8.85□□□□□ -0.99
CKAP2-207ENST00000490903 MAP3K4Q9Y6R4 1608 aa8.83□□□□□ -1
CKAP2-207ENST00000490903 ADGRL1O94910 1474 aa8.83□□□□□ -1
CKAP2-207ENST00000490903 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
CKAP2-207ENST00000490903 RAPGEF6Q8TEU7 1601 aa8.81□□□□□ -1
CKAP2-207ENST00000490903 MAGI3Q5TCQ9 1506 aa8.81□□□□□ -1
CKAP2-207ENST00000490903 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
CKAP2-207ENST00000490903 SAMD9Q5K651 1589 aa8.8□□□□□ -1
CKAP2-207ENST00000490903 MLECQ14165 292 aa8.79□□□□□ -1
CKAP2-207ENST00000490903 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
CKAP2-207ENST00000490903 CFAP43Q8NDM7 1665 aa8.78□□□□□ -1
CKAP2-207ENST00000490903 CDK13Q14004 1512 aaKnown RBP8.77□□□□□ -1.01
CKAP2-207ENST00000490903 KIF21BO75037 1637 aa8.76□□□□□ -1.01
CKAP2-207ENST00000490903 AKNAQ7Z591 1439 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 PHLDB1Q86UU1 1377 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 EFCAB5A4FU69 1503 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 FMN1Q68DA7 1419 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 ARHGAP35Q9NRY4 1499 aa8.74□□□□□ -1.01
CKAP2-207ENST00000490903 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-207ENST00000490903 ARAP3Q8WWN8 1544 aa8.73□□□□□ -1.01
CKAP2-207ENST00000490903 FANCAO15360 1455 aa8.73□□□□□ -1.01
CKAP2-207ENST00000490903 ABCA9Q8IUA7 1624 aa8.73□□□□□ -1.01
CKAP2-207ENST00000490903 DENND4BO75064 1496 aaPredicted RBP8.73□□□□□ -1.01
CKAP2-207ENST00000490903 NEO1Q92859 1461 aa8.72□□□□□ -1.01
CKAP2-207ENST00000490903 SCAPERQ9BY12 1400 aa8.71□□□□□ -1.01
CKAP2-207ENST00000490903 AFAP1Q8N556 730 aa8.71□□□□□ -1.01
CKAP2-207ENST00000490903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
CKAP2-207ENST00000490903 ILDR1Q86SU0 546 aaPredicted RBP8.7□□□□□ -1.02
CKAP2-207ENST00000490903 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
CKAP2-207ENST00000490903 HSPA2P54652 639 aa8.68□□□□□ -1.02
CKAP2-207ENST00000490903 PLCH2O75038 1416 aa8.68□□□□□ -1.02
CKAP2-207ENST00000490903 CLIP1P30622 1438 aa8.68□□□□□ -1.02
CKAP2-207ENST00000490903 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
CKAP2-207ENST00000490903 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
CKAP2-207ENST00000490903 HECW2Q9P2P5 1572 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms