RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 RUSC2Q8N2Y8 1516 aa28.71■■■□□ 2.19
RAPGEF3-212ENST00000490387 PRG4Q92954 1404 aaPredicted RBP28.65■■■□□ 2.18
RAPGEF3-212ENST00000490387 JPH4Q96JJ6 628 aa28.64■■■□□ 2.18
RAPGEF3-212ENST00000490387 CARMIL1Q5VZK9 1371 aa28.57■■■□□ 2.16
RAPGEF3-212ENST00000490387 KIAA0586Q9BVV6 1533 aa28.56■■■□□ 2.16
RAPGEF3-212ENST00000490387 EEA1Q15075 1411 aa28.52■■■□□ 2.16
RAPGEF3-212ENST00000490387 IQGAP2Q13576 1575 aa28.37■■■□□ 2.13
RAPGEF3-212ENST00000490387 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
RAPGEF3-212ENST00000490387 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
RAPGEF3-212ENST00000490387 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
RAPGEF3-212ENST00000490387 ADCY10Q96PN6 1610 aa28.31■■■□□ 2.12
RAPGEF3-212ENST00000490387 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
RAPGEF3-212ENST00000490387 CARMIL2Q6F5E8 1435 aa28.28■■■□□ 2.12
RAPGEF3-212ENST00000490387 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
RAPGEF3-212ENST00000490387 KIF13AQ9H1H9 1805 aa28.25■■■□□ 2.11
RAPGEF3-212ENST00000490387 KIF21BO75037 1637 aa28.24■■■□□ 2.11
RAPGEF3-212ENST00000490387 PTPRGP23470 1445 aa28.24■■■□□ 2.11
RAPGEF3-212ENST00000490387 TNIKQ9UKE5 1360 aa28.23■■■□□ 2.11
RAPGEF3-212ENST00000490387 TTBK1Q5TCY1 1321 aaPredicted RBP28.21■■■□□ 2.11
RAPGEF3-212ENST00000490387 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
RAPGEF3-212ENST00000490387 CTTNBP2Q8WZ74 1663 aa28.18■■■□□ 2.1
RAPGEF3-212ENST00000490387 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
RAPGEF3-212ENST00000490387 UGGT2Q9NYU1 1516 aa28.17■■■□□ 2.1
RAPGEF3-212ENST00000490387 ABCC10Q5T3U5 1492 aa28.13■■■□□ 2.09
RAPGEF3-212ENST00000490387 KIAA0556O60303 1618 aa28.1■■■□□ 2.09
RAPGEF3-212ENST00000490387 DIP2BQ9P265 1576 aa28.1■■■□□ 2.09
RAPGEF3-212ENST00000490387 FAM69CQ0P6D2 419 aa28.09■■■□□ 2.09
RAPGEF3-212ENST00000490387 ABCC2Q92887 1545 aa28.06■■■□□ 2.08
RAPGEF3-212ENST00000490387 GOLGA3Q08378 1498 aa28.04■■■□□ 2.08
RAPGEF3-212ENST00000490387 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
RAPGEF3-212ENST00000490387 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
RAPGEF3-212ENST00000490387 TSPOAP1O95153 1857 aa27.94■■■□□ 2.06
RAPGEF3-212ENST00000490387 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
RAPGEF3-212ENST00000490387 PLB1Q6P1J6 1458 aa27.92■■■□□ 2.06
RAPGEF3-212ENST00000490387 KDM5BQ9UGL1 1544 aa27.9■■■□□ 2.06
RAPGEF3-212ENST00000490387 ZCCHC11Q5TAX3 1644 aaKnown RBP27.89■■■□□ 2.06
RAPGEF3-212ENST00000490387 EHMT2Q96KQ7 1210 aa27.85■■■□□ 2.05
RAPGEF3-212ENST00000490387 GLI2P10070 1586 aa27.82■■■□□ 2.04
RAPGEF3-212ENST00000490387 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
RAPGEF3-212ENST00000490387 ABCA8O94911 1581 aa27.81■■■□□ 2.04
RAPGEF3-212ENST00000490387 KDM6BO15054 1643 aa27.8■■■□□ 2.04
RAPGEF3-212ENST00000490387 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
RAPGEF3-212ENST00000490387 SAMD9Q5K651 1589 aa27.74■■■□□ 2.03
RAPGEF3-212ENST00000490387 P3H3Q8IVL6 736 aa27.74■■■□□ 2.03
RAPGEF3-212ENST00000490387 PPRC1Q5VV67 1664 aaKnown RBP27.74■■■□□ 2.03
RAPGEF3-212ENST00000490387 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
RAPGEF3-212ENST00000490387 WDR7Q9Y4E6 1490 aa27.72■■■□□ 2.03
RAPGEF3-212ENST00000490387 MAP3K4Q9Y6R4 1608 aa27.7■■■□□ 2.03
RAPGEF3-212ENST00000490387 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
RAPGEF3-212ENST00000490387 EFCAB5A4FU69 1503 aa27.67■■■□□ 2.02
RAPGEF3-212ENST00000490387 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.02
RAPGEF3-212ENST00000490387 TEX14Q8IWB6 1497 aa27.61■■■□□ 2.01
RAPGEF3-212ENST00000490387 ARHGAP35Q9NRY4 1499 aa27.6■■■□□ 2.01
RAPGEF3-212ENST00000490387 RAPGEF6Q8TEU7 1601 aa27.59■■■□□ 2.01
RAPGEF3-212ENST00000490387 ARID3CA6NKF2 412 aa27.59■■■□□ 2.01
RAPGEF3-212ENST00000490387 KCNH8Q96L42 1107 aa27.57■■■□□ 2
RAPGEF3-212ENST00000490387 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
RAPGEF3-212ENST00000490387 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
RAPGEF3-212ENST00000490387 ATP10BO94823 1461 aa27.56■■■□□ 2
RAPGEF3-212ENST00000490387 CLIP1P30622 1438 aa27.54■■■□□ 2
RAPGEF3-212ENST00000490387 CEP162Q5TB80 1403 aa27.54■■■□□ 2
RAPGEF3-212ENST00000490387 CD109Q6YHK3 1445 aa27.51■■□□□ 1.99
RAPGEF3-212ENST00000490387 MAGI3Q5TCQ9 1506 aa27.47■■□□□ 1.99
RAPGEF3-212ENST00000490387 COL17A1Q9UMD9 1497 aaPredicted RBP27.46■■□□□ 1.99
RAPGEF3-212ENST00000490387 NUP153P49790 1475 aaKnown RBP27.45■■□□□ 1.99
RAPGEF3-212ENST00000490387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.98
RAPGEF3-212ENST00000490387 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.98
RAPGEF3-212ENST00000490387 ABCA9Q8IUA7 1624 aa27.38■■□□□ 1.97
RAPGEF3-212ENST00000490387 FMN1Q68DA7 1419 aa27.36■■□□□ 1.97
RAPGEF3-212ENST00000490387 KDM4FA0A1W2PPD8 638 aa27.31■■□□□ 1.96
RAPGEF3-212ENST00000490387 PLEKHD1A6NEE1 506 aa27.29■■□□□ 1.96
RAPGEF3-212ENST00000490387 PCF11O94913 1555 aaKnown RBP27.26■■□□□ 1.95
RAPGEF3-212ENST00000490387 ARAP3Q8WWN8 1544 aa27.25■■□□□ 1.95
RAPGEF3-212ENST00000490387 CDK13Q14004 1512 aaKnown RBP27.24■■□□□ 1.95
RAPGEF3-212ENST00000490387 HECW1Q76N89 1606 aa27.23■■□□□ 1.95
RAPGEF3-212ENST00000490387 CASKIN1Q8WXD9 1431 aa27.23■■□□□ 1.95
RAPGEF3-212ENST00000490387 ADGRL1O94910 1474 aa27.22■■□□□ 1.95
RAPGEF3-212ENST00000490387 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
RAPGEF3-212ENST00000490387 NEO1Q92859 1461 aa27.2■■□□□ 1.95
RAPGEF3-212ENST00000490387 ATP1B4Q9UN42 357 aaPredicted RBP27.2■■□□□ 1.94
RAPGEF3-212ENST00000490387 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
RAPGEF3-212ENST00000490387 VPS8Q8N3P4 1428 aa27.19■■□□□ 1.94
RAPGEF3-212ENST00000490387 LRRIQ1Q96JM4 1722 aa27.17■■□□□ 1.94
RAPGEF3-212ENST00000490387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
RAPGEF3-212ENST00000490387 TTC37Q6PGP7 1564 aa27.14■■□□□ 1.94
RAPGEF3-212ENST00000490387 CFAP74Q9C0B2 1584 aa27.12■■□□□ 1.93
RAPGEF3-212ENST00000490387 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
RAPGEF3-212ENST00000490387 FANCAO15360 1455 aa27.07■■□□□ 1.92
RAPGEF3-212ENST00000490387 CDK11AQ9UQ88 783 aaPredicted RBP27.07■■□□□ 1.92
RAPGEF3-212ENST00000490387 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
RAPGEF3-212ENST00000490387 CCDC18Q5T9S5 1454 aa27.06■■□□□ 1.92
RAPGEF3-212ENST00000490387 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
RAPGEF3-212ENST00000490387 KIF14Q15058 1648 aa27.01■■□□□ 1.92
RAPGEF3-212ENST00000490387 DENND4BO75064 1496 aaPredicted RBP27.01■■□□□ 1.91
RAPGEF3-212ENST00000490387 RICTORQ6R327 1708 aa27.01■■□□□ 1.91
RAPGEF3-212ENST00000490387 MYO5CQ9NQX4 1742 aa27■■□□□ 1.91
RAPGEF3-212ENST00000490387 TROQ12816 1431 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF3-212ENST00000490387 PLCH2O75038 1416 aa26.98■■□□□ 1.91
RAPGEF3-212ENST00000490387 MAP3K1Q13233 1512 aa26.94■■□□□ 1.9
RAPGEF3-212ENST00000490387 TIAM1Q13009 1591 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms