RNA–Protein interactions for RNA: ENST00000490137.1

PTPN18-214, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-214ENST00000490137 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
PTPN18-214ENST00000490137 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
PTPN18-214ENST00000490137 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
PTPN18-214ENST00000490137 CEP170Q5SW79 1584 aa11.61□□□□□ -0.55
PTPN18-214ENST00000490137 ERCC6L2Q5T890 1561 aa11.6□□□□□ -0.55
PTPN18-214ENST00000490137 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
PTPN18-214ENST00000490137 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
PTPN18-214ENST00000490137 NUP160Q12769 1436 aa11.6□□□□□ -0.55
PTPN18-214ENST00000490137 KDM6BO15054 1643 aa11.59□□□□□ -0.55
PTPN18-214ENST00000490137 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
PTPN18-214ENST00000490137 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
PTPN18-214ENST00000490137 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
PTPN18-214ENST00000490137 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
PTPN18-214ENST00000490137 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
PTPN18-214ENST00000490137 CUX1P39880 1505 aa11.53□□□□□ -0.56
PTPN18-214ENST00000490137 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPN18-214ENST00000490137 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
PTPN18-214ENST00000490137 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
PTPN18-214ENST00000490137 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
PTPN18-214ENST00000490137 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
PTPN18-214ENST00000490137 FHAD1B1AJZ9 1412 aa11.47□□□□□ -0.57
PTPN18-214ENST00000490137 PRG4Q92954 1404 aaPredicted RBP11.46□□□□□ -0.57
PTPN18-214ENST00000490137 ADGRL1O94910 1474 aa11.45□□□□□ -0.58
PTPN18-214ENST00000490137 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
PTPN18-214ENST00000490137 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
PTPN18-214ENST00000490137 ADCY10Q96PN6 1610 aa11.41□□□□□ -0.58
PTPN18-214ENST00000490137 TSPOAP1O95153 1857 aa11.4□□□□□ -0.58
PTPN18-214ENST00000490137 ZEB1P37275 1124 aaPredicted RBP11.39□□□□□ -0.59
PTPN18-214ENST00000490137 GLI2P10070 1586 aa11.38□□□□□ -0.59
PTPN18-214ENST00000490137 PCGF6Q9BYE7 350 aa11.38□□□□□ -0.59
PTPN18-214ENST00000490137 WRNQ14191 1432 aaPredicted RBP eCLIP11.37□□□□□ -0.59
PTPN18-214ENST00000490137 TRIM26Q12899 539 aaPredicted RBP11.36□□□□□ -0.59
PTPN18-214ENST00000490137 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
PTPN18-214ENST00000490137 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
PTPN18-214ENST00000490137 HOXD11P31277 338 aaPredicted RBP11.34□□□□□ -0.59
PTPN18-214ENST00000490137 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
PTPN18-214ENST00000490137 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
PTPN18-214ENST00000490137 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
PTPN18-214ENST00000490137 C1QBPQ07021 282 aaKnown RBP11.3□□□□□ -0.6
PTPN18-214ENST00000490137 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
PTPN18-214ENST00000490137 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
PTPN18-214ENST00000490137 BIVM-ERCC5R4GMW8 1640 aa11.28□□□□□ -0.6
PTPN18-214ENST00000490137 ABCC2Q92887 1545 aa11.28□□□□□ -0.6
PTPN18-214ENST00000490137 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
PTPN18-214ENST00000490137 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
PTPN18-214ENST00000490137 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
PTPN18-214ENST00000490137 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
PTPN18-214ENST00000490137 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
PTPN18-214ENST00000490137 SOCS7O14512 581 aa11.24□□□□□ -0.61
PTPN18-214ENST00000490137 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
PTPN18-214ENST00000490137 PTPRGP23470 1445 aa11.22□□□□□ -0.61
PTPN18-214ENST00000490137 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
PTPN18-214ENST00000490137 TNIKQ9UKE5 1360 aa11.18□□□□□ -0.62
PTPN18-214ENST00000490137 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
PTPN18-214ENST00000490137 KDM5BQ9UGL1 1544 aa11.17□□□□□ -0.62
PTPN18-214ENST00000490137 CUL7Q14999 1698 aa11.17□□□□□ -0.62
PTPN18-214ENST00000490137 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
PTPN18-214ENST00000490137 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
PTPN18-214ENST00000490137 PTPRMP28827 1452 aa11.12□□□□□ -0.63
PTPN18-214ENST00000490137 PCF11O94913 1555 aaKnown RBP11.11□□□□□ -0.63
PTPN18-214ENST00000490137 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
PTPN18-214ENST00000490137 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
PTPN18-214ENST00000490137 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
PTPN18-214ENST00000490137 LOC105371045A0A1W2PR82 267 aa11.1□□□□□ -0.63
PTPN18-214ENST00000490137 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
PTPN18-214ENST00000490137 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
PTPN18-214ENST00000490137 KIF21BO75037 1637 aa11.09□□□□□ -0.63
PTPN18-214ENST00000490137 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
PTPN18-214ENST00000490137 DISP3Q9P2K9 1392 aa11.08□□□□□ -0.64
PTPN18-214ENST00000490137 ZCCHC11Q5TAX3 1644 aaKnown RBP11.08□□□□□ -0.64
PTPN18-214ENST00000490137 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
PTPN18-214ENST00000490137 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
PTPN18-214ENST00000490137 ARAP3Q8WWN8 1544 aa11.07□□□□□ -0.64
PTPN18-214ENST00000490137 IGF1RP08069 1367 aa11.06□□□□□ -0.64
PTPN18-214ENST00000490137 CERKQ8TCT0 537 aa11.06□□□□□ -0.64
PTPN18-214ENST00000490137 IQGAP2Q13576 1575 aa11.05□□□□□ -0.64
PTPN18-214ENST00000490137 CD109Q6YHK3 1445 aa11.05□□□□□ -0.64
PTPN18-214ENST00000490137 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
PTPN18-214ENST00000490137 DISP1Q96F81 1524 aa11.02□□□□□ -0.65
PTPN18-214ENST00000490137 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
PTPN18-214ENST00000490137 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
PTPN18-214ENST00000490137 UGGT2Q9NYU1 1516 aa10.99□□□□□ -0.65
PTPN18-214ENST00000490137 POTEHQ6S545 545 aa10.99□□□□□ -0.65
PTPN18-214ENST00000490137 CARMIL1Q5VZK9 1371 aa10.98□□□□□ -0.65
PTPN18-214ENST00000490137 TTBK1Q5TCY1 1321 aaPredicted RBP10.97□□□□□ -0.65
PTPN18-214ENST00000490137 MADDQ8WXG6 1647 aa10.97□□□□□ -0.65
PTPN18-214ENST00000490137 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
PTPN18-214ENST00000490137 NEO1Q92859 1461 aa10.93□□□□□ -0.66
PTPN18-214ENST00000490137 MYT1Q01538 1121 aa10.92□□□□□ -0.66
PTPN18-214ENST00000490137 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
PTPN18-214ENST00000490137 EEA1Q15075 1411 aa10.91□□□□□ -0.66
PTPN18-214ENST00000490137 RIMS1Q86UR5 1692 aaKnown RBP10.9□□□□□ -0.66
PTPN18-214ENST00000490137 ABCA9Q8IUA7 1624 aa10.9□□□□□ -0.66
PTPN18-214ENST00000490137 POGZQ7Z3K3 1410 aa10.9□□□□□ -0.66
PTPN18-214ENST00000490137 ABCA8O94911 1581 aa10.9□□□□□ -0.67
PTPN18-214ENST00000490137 GOLGA3Q08378 1498 aa10.88□□□□□ -0.67
PTPN18-214ENST00000490137 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
PTPN18-214ENST00000490137 ARID4BQ4LE39 1312 aaPredicted RBP10.87□□□□□ -0.67
PTPN18-214ENST00000490137 YEATS2Q9ULM3 1422 aa10.87□□□□□ -0.67
PTPN18-214ENST00000490137 HSPA2P54652 639 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms