RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
ACTN4-206ENST00000489451 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
ACTN4-206ENST00000489451 IGF1RP08069 1367 aa20.79■□□□□ 0.92
ACTN4-206ENST00000489451 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
ACTN4-206ENST00000489451 CUL7Q14999 1698 aa20.74■□□□□ 0.91
ACTN4-206ENST00000489451 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
ACTN4-206ENST00000489451 KIAA0586Q9BVV6 1533 aa20.7■□□□□ 0.9
ACTN4-206ENST00000489451 KDM6BO15054 1643 aa20.7■□□□□ 0.9
ACTN4-206ENST00000489451 ADCY10Q96PN6 1610 aa20.68■□□□□ 0.9
ACTN4-206ENST00000489451 MAPKBP1O60336 1514 aa20.62■□□□□ 0.89
ACTN4-206ENST00000489451 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
ACTN4-206ENST00000489451 ABCC10Q5T3U5 1492 aa20.59■□□□□ 0.89
ACTN4-206ENST00000489451 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
ACTN4-206ENST00000489451 HECW2Q9P2P5 1572 aa20.59■□□□□ 0.89
ACTN4-206ENST00000489451 FAM69CQ0P6D2 419 aa20.57■□□□□ 0.88
ACTN4-206ENST00000489451 TSPOAP1O95153 1857 aa20.53■□□□□ 0.88
ACTN4-206ENST00000489451 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
ACTN4-206ENST00000489451 PTPRGP23470 1445 aa20.48■□□□□ 0.87
ACTN4-206ENST00000489451 ADGRL1O94910 1474 aa20.48■□□□□ 0.87
ACTN4-206ENST00000489451 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
ACTN4-206ENST00000489451 NPM1P06748 294 aaKnown RBP eCLIP20.45■□□□□ 0.86
ACTN4-206ENST00000489451 TNIKQ9UKE5 1360 aa20.45■□□□□ 0.86
ACTN4-206ENST00000489451 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
ACTN4-206ENST00000489451 FBXO41Q8TF61 875 aa20.42■□□□□ 0.86
ACTN4-206ENST00000489451 CARMIL2Q6F5E8 1435 aa20.42■□□□□ 0.86
ACTN4-206ENST00000489451 ABCC2Q92887 1545 aa20.42■□□□□ 0.86
ACTN4-206ENST00000489451 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
ACTN4-206ENST00000489451 UHRF1BP1LA0JNW5 1464 aa20.39■□□□□ 0.85
ACTN4-206ENST00000489451 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
ACTN4-206ENST00000489451 KIAA0556O60303 1618 aa20.37■□□□□ 0.85
ACTN4-206ENST00000489451 PPRC1Q5VV67 1664 aaKnown RBP20.36■□□□□ 0.85
ACTN4-206ENST00000489451 ASXL2Q76L83 1435 aa20.35■□□□□ 0.85
ACTN4-206ENST00000489451 UACAQ9BZF9 1416 aa20.35■□□□□ 0.85
ACTN4-206ENST00000489451 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
ACTN4-206ENST00000489451 GLI2P10070 1586 aa20.32■□□□□ 0.84
ACTN4-206ENST00000489451 KDM5BQ9UGL1 1544 aa20.31■□□□□ 0.84
ACTN4-206ENST00000489451 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
ACTN4-206ENST00000489451 ZCCHC11Q5TAX3 1644 aaKnown RBP20.29■□□□□ 0.84
ACTN4-206ENST00000489451 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
ACTN4-206ENST00000489451 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
ACTN4-206ENST00000489451 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
ACTN4-206ENST00000489451 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
ACTN4-206ENST00000489451 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
ACTN4-206ENST00000489451 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.82
ACTN4-206ENST00000489451 ABCA8O94911 1581 aa20.2■□□□□ 0.82
ACTN4-206ENST00000489451 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
ACTN4-206ENST00000489451 GOLGA3Q08378 1498 aa20.14■□□□□ 0.81
ACTN4-206ENST00000489451 TEX14Q8IWB6 1497 aa20.06■□□□□ 0.8
ACTN4-206ENST00000489451 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
ACTN4-206ENST00000489451 SOCS7O14512 581 aa20.05■□□□□ 0.8
ACTN4-206ENST00000489451 CFAP43Q8NDM7 1665 aa20.04■□□□□ 0.8
ACTN4-206ENST00000489451 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.79
ACTN4-206ENST00000489451 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
ACTN4-206ENST00000489451 ATP10BO94823 1461 aa19.99■□□□□ 0.79
ACTN4-206ENST00000489451 P3H3Q8IVL6 736 aa19.99■□□□□ 0.79
ACTN4-206ENST00000489451 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
ACTN4-206ENST00000489451 ILDR2Q71H61 639 aa19.96■□□□□ 0.79
ACTN4-206ENST00000489451 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
ACTN4-206ENST00000489451 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.78
ACTN4-206ENST00000489451 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
ACTN4-206ENST00000489451 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
ACTN4-206ENST00000489451 EEA1Q15075 1411 aa19.93■□□□□ 0.78
ACTN4-206ENST00000489451 ABCA9Q8IUA7 1624 aa19.91■□□□□ 0.78
ACTN4-206ENST00000489451 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
ACTN4-206ENST00000489451 KIF21BO75037 1637 aa19.89■□□□□ 0.77
ACTN4-206ENST00000489451 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
ACTN4-206ENST00000489451 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
ACTN4-206ENST00000489451 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
ACTN4-206ENST00000489451 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
ACTN4-206ENST00000489451 RANGAP1P46060 587 aaPredicted RBP19.8■□□□□ 0.76
ACTN4-206ENST00000489451 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
ACTN4-206ENST00000489451 SPATA31D1Q6ZQQ2 1576 aa19.79■□□□□ 0.76
ACTN4-206ENST00000489451 EFCAB5A4FU69 1503 aa19.77■□□□□ 0.76
ACTN4-206ENST00000489451 PTPRMP28827 1452 aa19.77■□□□□ 0.76
ACTN4-206ENST00000489451 NEO1Q92859 1461 aa19.75■□□□□ 0.75
ACTN4-206ENST00000489451 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
ACTN4-206ENST00000489451 ADAMTSL3P82987 1691 aa19.72■□□□□ 0.75
ACTN4-206ENST00000489451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.71■□□□□ 0.75
ACTN4-206ENST00000489451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.71■□□□□ 0.75
ACTN4-206ENST00000489451 RAPGEF3O95398 923 aa19.71■□□□□ 0.75
ACTN4-206ENST00000489451 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
ACTN4-206ENST00000489451 TTC37Q6PGP7 1564 aa19.7■□□□□ 0.74
ACTN4-206ENST00000489451 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
ACTN4-206ENST00000489451 CERKQ8TCT0 537 aa19.69■□□□□ 0.74
ACTN4-206ENST00000489451 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
ACTN4-206ENST00000489451 ARHGAP35Q9NRY4 1499 aa19.66■□□□□ 0.74
ACTN4-206ENST00000489451 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
ACTN4-206ENST00000489451 ARHGEF40Q8TER5 1519 aa19.63■□□□□ 0.73
ACTN4-206ENST00000489451 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
ACTN4-206ENST00000489451 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
ACTN4-206ENST00000489451 MADDQ8WXG6 1647 aa19.62■□□□□ 0.73
ACTN4-206ENST00000489451 FANCAO15360 1455 aa19.62■□□□□ 0.73
ACTN4-206ENST00000489451 AKNAQ7Z591 1439 aa19.62■□□□□ 0.73
ACTN4-206ENST00000489451 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
ACTN4-206ENST00000489451 CFAP74Q9C0B2 1584 aa19.61■□□□□ 0.73
ACTN4-206ENST00000489451 DENND4BO75064 1496 aaPredicted RBP19.6■□□□□ 0.73
ACTN4-206ENST00000489451 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
ACTN4-206ENST00000489451 ZMYM4Q5VZL5 1548 aa19.59■□□□□ 0.73
ACTN4-206ENST00000489451 HECW1Q76N89 1606 aa19.58■□□□□ 0.73
ACTN4-206ENST00000489451 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms