RNA–Protein interactions for RNA: ENST00000489426.5

SRPK3-208, Transcript of SRSF protein kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SRPK3, Length 4,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3-208ENST00000489426 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
SRPK3-208ENST00000489426 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
SRPK3-208ENST00000489426 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
SRPK3-208ENST00000489426 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
SRPK3-208ENST00000489426 CCDC136Q96JN2 1154 aa17.25■□□□□ 0.35
SRPK3-208ENST00000489426 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
SRPK3-208ENST00000489426 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
SRPK3-208ENST00000489426 KCNH8Q96L42 1107 aa17.22■□□□□ 0.35
SRPK3-208ENST00000489426 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.35
SRPK3-208ENST00000489426 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
SRPK3-208ENST00000489426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
SRPK3-208ENST00000489426 ARXQ96QS3 562 aa17.15■□□□□ 0.34
SRPK3-208ENST00000489426 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
SRPK3-208ENST00000489426 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
SRPK3-208ENST00000489426 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
SRPK3-208ENST00000489426 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
SRPK3-208ENST00000489426 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
SRPK3-208ENST00000489426 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
SRPK3-208ENST00000489426 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
SRPK3-208ENST00000489426 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
SRPK3-208ENST00000489426 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
SRPK3-208ENST00000489426 HIRIP3Q9BW71 556 aaPredicted RBP17.1■□□□□ 0.33
SRPK3-208ENST00000489426 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
SRPK3-208ENST00000489426 PLPPR3Q6T4P5 718 aa17.09■□□□□ 0.33
SRPK3-208ENST00000489426 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
SRPK3-208ENST00000489426 RUSC2Q8N2Y8 1516 aa17.06■□□□□ 0.32
SRPK3-208ENST00000489426 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
SRPK3-208ENST00000489426 CFDP1Q9UEE9 299 aaPredicted RBP17.02■□□□□ 0.32
SRPK3-208ENST00000489426 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
SRPK3-208ENST00000489426 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.31
SRPK3-208ENST00000489426 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.31
SRPK3-208ENST00000489426 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
SRPK3-208ENST00000489426 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
SRPK3-208ENST00000489426 NEFMP07197 916 aa16.98■□□□□ 0.31
SRPK3-208ENST00000489426 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
SRPK3-208ENST00000489426 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
SRPK3-208ENST00000489426 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.31
SRPK3-208ENST00000489426 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.3
SRPK3-208ENST00000489426 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.3
SRPK3-208ENST00000489426 RAPGEF2Q9Y4G8 1499 aa16.95■□□□□ 0.3
SRPK3-208ENST00000489426 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
SRPK3-208ENST00000489426 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
SRPK3-208ENST00000489426 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
SRPK3-208ENST00000489426 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
SRPK3-208ENST00000489426 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
SRPK3-208ENST00000489426 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
SRPK3-208ENST00000489426 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
SRPK3-208ENST00000489426 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
SRPK3-208ENST00000489426 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
SRPK3-208ENST00000489426 CCNB3Q8WWL7 1395 aa16.86■□□□□ 0.29
SRPK3-208ENST00000489426 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
SRPK3-208ENST00000489426 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
SRPK3-208ENST00000489426 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
SRPK3-208ENST00000489426 PPP4R2Q9NY27 417 aa16.84■□□□□ 0.29
SRPK3-208ENST00000489426 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
SRPK3-208ENST00000489426 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
SRPK3-208ENST00000489426 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.84■□□□□ 0.29
SRPK3-208ENST00000489426 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
SRPK3-208ENST00000489426 NESP48681 1621 aa16.83■□□□□ 0.28
SRPK3-208ENST00000489426 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
SRPK3-208ENST00000489426 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SRPK3-208ENST00000489426 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
SRPK3-208ENST00000489426 SIN3AQ96ST3 1273 aa16.81■□□□□ 0.28
SRPK3-208ENST00000489426 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
SRPK3-208ENST00000489426 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
SRPK3-208ENST00000489426 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
SRPK3-208ENST00000489426 JPH4Q96JJ6 628 aa16.78■□□□□ 0.28
SRPK3-208ENST00000489426 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
SRPK3-208ENST00000489426 IGF1RP08069 1367 aa16.77■□□□□ 0.28
SRPK3-208ENST00000489426 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRPK3-208ENST00000489426 FMN1Q68DA7 1419 aa16.75■□□□□ 0.27
SRPK3-208ENST00000489426 BECN1Q14457 450 aa16.74■□□□□ 0.27
SRPK3-208ENST00000489426 CFTRP13569 1480 aa16.73■□□□□ 0.27
SRPK3-208ENST00000489426 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
SRPK3-208ENST00000489426 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
SRPK3-208ENST00000489426 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.26
SRPK3-208ENST00000489426 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRPK3-208ENST00000489426 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
SRPK3-208ENST00000489426 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
SRPK3-208ENST00000489426 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
SRPK3-208ENST00000489426 WDR43Q15061 677 aaKnown RBP eCLIP16.66■□□□□ 0.26
SRPK3-208ENST00000489426 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
SRPK3-208ENST00000489426 FOXD1Q16676 465 aa16.64■□□□□ 0.25
SRPK3-208ENST00000489426 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
SRPK3-208ENST00000489426 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
SRPK3-208ENST00000489426 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
SRPK3-208ENST00000489426 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
SRPK3-208ENST00000489426 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
SRPK3-208ENST00000489426 RGS3P49796 1198 aa16.59■□□□□ 0.25
SRPK3-208ENST00000489426 MLECQ14165 292 aa16.59■□□□□ 0.25
SRPK3-208ENST00000489426 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
SRPK3-208ENST00000489426 RAB3GAP2Q9H2M9 1393 aa16.57■□□□□ 0.24
SRPK3-208ENST00000489426 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
SRPK3-208ENST00000489426 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
SRPK3-208ENST00000489426 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
SRPK3-208ENST00000489426 GGT6Q6P531 493 aa16.56■□□□□ 0.24
SRPK3-208ENST00000489426 CARD11Q9BXL7 1154 aa16.55■□□□□ 0.24
SRPK3-208ENST00000489426 CUX1P39880 1505 aa16.55■□□□□ 0.24
SRPK3-208ENST00000489426 PTPRGP23470 1445 aa16.54■□□□□ 0.24
SRPK3-208ENST00000489426 PKD2Q13563 968 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms