RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 FHAD1B1AJZ9 1412 aa19.43■□□□□ 0.7
PTP4A2-206ENST00000489313 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
PTP4A2-206ENST00000489313 ERICH3Q5RHP9 1530 aa19.39■□□□□ 0.69
PTP4A2-206ENST00000489313 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
PTP4A2-206ENST00000489313 KIF13AQ9H1H9 1805 aa19.31■□□□□ 0.68
PTP4A2-206ENST00000489313 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
PTP4A2-206ENST00000489313 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
PTP4A2-206ENST00000489313 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
PTP4A2-206ENST00000489313 ADCY10Q96PN6 1610 aa19.15■□□□□ 0.66
PTP4A2-206ENST00000489313 ABCC10Q5T3U5 1492 aa19.15■□□□□ 0.66
PTP4A2-206ENST00000489313 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.65
PTP4A2-206ENST00000489313 MAPKBP1O60336 1514 aa19.12■□□□□ 0.65
PTP4A2-206ENST00000489313 DIP2BQ9P265 1576 aa19.12■□□□□ 0.65
PTP4A2-206ENST00000489313 IGF1RP08069 1367 aa19.1■□□□□ 0.65
PTP4A2-206ENST00000489313 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
PTP4A2-206ENST00000489313 KIF27Q86VH2 1401 aa19.08■□□□□ 0.64
PTP4A2-206ENST00000489313 CUL7Q14999 1698 aa19.08■□□□□ 0.64
PTP4A2-206ENST00000489313 TSPOAP1O95153 1857 aa19.05■□□□□ 0.64
PTP4A2-206ENST00000489313 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
PTP4A2-206ENST00000489313 KDM6BO15054 1643 aa19■□□□□ 0.63
PTP4A2-206ENST00000489313 PTPRGP23470 1445 aa18.98■□□□□ 0.63
PTP4A2-206ENST00000489313 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
PTP4A2-206ENST00000489313 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
PTP4A2-206ENST00000489313 TNIKQ9UKE5 1360 aa18.92■□□□□ 0.62
PTP4A2-206ENST00000489313 IQGAP2Q13576 1575 aa18.91■□□□□ 0.62
PTP4A2-206ENST00000489313 KDM4FA0A1W2PPD8 638 aa18.91■□□□□ 0.62
PTP4A2-206ENST00000489313 ABCC2Q92887 1545 aa18.9■□□□□ 0.62
PTP4A2-206ENST00000489313 ASXL2Q76L83 1435 aa18.88■□□□□ 0.61
PTP4A2-206ENST00000489313 PPRC1Q5VV67 1664 aaKnown RBP18.86■□□□□ 0.61
PTP4A2-206ENST00000489313 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
PTP4A2-206ENST00000489313 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
PTP4A2-206ENST00000489313 UHRF1BP1LA0JNW5 1464 aa18.83■□□□□ 0.61
PTP4A2-206ENST00000489313 GLI2P10070 1586 aa18.83■□□□□ 0.6
PTP4A2-206ENST00000489313 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
PTP4A2-206ENST00000489313 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
PTP4A2-206ENST00000489313 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
PTP4A2-206ENST00000489313 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.59
PTP4A2-206ENST00000489313 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
PTP4A2-206ENST00000489313 ZCCHC11Q5TAX3 1644 aaKnown RBP18.76■□□□□ 0.59
PTP4A2-206ENST00000489313 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
PTP4A2-206ENST00000489313 KIAA0556O60303 1618 aa18.74■□□□□ 0.59
PTP4A2-206ENST00000489313 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
PTP4A2-206ENST00000489313 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
PTP4A2-206ENST00000489313 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
PTP4A2-206ENST00000489313 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
PTP4A2-206ENST00000489313 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
PTP4A2-206ENST00000489313 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
PTP4A2-206ENST00000489313 ABCA8O94911 1581 aa18.59■□□□□ 0.57
PTP4A2-206ENST00000489313 GOLGA3Q08378 1498 aa18.58■□□□□ 0.56
PTP4A2-206ENST00000489313 KCNH8Q96L42 1107 aa18.58■□□□□ 0.56
PTP4A2-206ENST00000489313 ILDR1Q86SU0 546 aaPredicted RBP18.57■□□□□ 0.56
PTP4A2-206ENST00000489313 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
PTP4A2-206ENST00000489313 CD109Q6YHK3 1445 aa18.56■□□□□ 0.56
PTP4A2-206ENST00000489313 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
PTP4A2-206ENST00000489313 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
PTP4A2-206ENST00000489313 PRXQ9BXM0 1461 aa18.52■□□□□ 0.56
PTP4A2-206ENST00000489313 ARID3CA6NKF2 412 aa18.49■□□□□ 0.55
PTP4A2-206ENST00000489313 P3H3Q8IVL6 736 aa18.47■□□□□ 0.55
PTP4A2-206ENST00000489313 KIF21BO75037 1637 aa18.46■□□□□ 0.55
PTP4A2-206ENST00000489313 ATP10BO94823 1461 aa18.42■□□□□ 0.54
PTP4A2-206ENST00000489313 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
PTP4A2-206ENST00000489313 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
PTP4A2-206ENST00000489313 ABCA9Q8IUA7 1624 aa18.38■□□□□ 0.53
PTP4A2-206ENST00000489313 SAMD9Q5K651 1589 aa18.37■□□□□ 0.53
PTP4A2-206ENST00000489313 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
PTP4A2-206ENST00000489313 CSRNP3Q8WYN3 585 aa18.33■□□□□ 0.52
PTP4A2-206ENST00000489313 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
PTP4A2-206ENST00000489313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
PTP4A2-206ENST00000489313 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
PTP4A2-206ENST00000489313 PHLDB1Q86UU1 1377 aa18.31■□□□□ 0.52
PTP4A2-206ENST00000489313 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
PTP4A2-206ENST00000489313 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
PTP4A2-206ENST00000489313 NUP153P49790 1475 aaKnown RBP18.28■□□□□ 0.52
PTP4A2-206ENST00000489313 NEO1Q92859 1461 aa18.28■□□□□ 0.52
PTP4A2-206ENST00000489313 FRMPD1Q5SYB0 1578 aa18.28■□□□□ 0.52
PTP4A2-206ENST00000489313 PTPRMP28827 1452 aa18.27■□□□□ 0.52
PTP4A2-206ENST00000489313 FHOD3Q2V2M9 1422 aa18.26■□□□□ 0.51
PTP4A2-206ENST00000489313 BCORL1Q5H9F3 1711 aa18.24■□□□□ 0.51
PTP4A2-206ENST00000489313 ARID4BQ4LE39 1312 aaPredicted RBP18.23■□□□□ 0.51
PTP4A2-206ENST00000489313 MADDQ8WXG6 1647 aa18.22■□□□□ 0.51
PTP4A2-206ENST00000489313 RICTORQ6R327 1708 aa18.19■□□□□ 0.5
PTP4A2-206ENST00000489313 PLEKHD1A6NEE1 506 aa18.18■□□□□ 0.5
PTP4A2-206ENST00000489313 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
PTP4A2-206ENST00000489313 EEA1Q15075 1411 aa18.17■□□□□ 0.5
PTP4A2-206ENST00000489313 DENND4BO75064 1496 aaPredicted RBP18.17■□□□□ 0.5
PTP4A2-206ENST00000489313 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
PTP4A2-206ENST00000489313 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
PTP4A2-206ENST00000489313 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
PTP4A2-206ENST00000489313 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
PTP4A2-206ENST00000489313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTP4A2-206ENST00000489313 FANCAO15360 1455 aa18.15■□□□□ 0.5
PTP4A2-206ENST00000489313 FBXO41Q8TF61 875 aa18.14■□□□□ 0.49
PTP4A2-206ENST00000489313 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.49
PTP4A2-206ENST00000489313 LMTK3Q96Q04 1460 aa18.13■□□□□ 0.49
PTP4A2-206ENST00000489313 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
PTP4A2-206ENST00000489313 CDK13Q14004 1512 aaKnown RBP18.11■□□□□ 0.49
PTP4A2-206ENST00000489313 SIGLEC1Q9BZZ2 1709 aa18.11■□□□□ 0.49
PTP4A2-206ENST00000489313 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
PTP4A2-206ENST00000489313 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
PTP4A2-206ENST00000489313 YEATS2Q9ULM3 1422 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms