RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 CUL7Q14999 1698 aa20.64■□□□□ 0.9
COL4A5-206ENST00000489230 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
COL4A5-206ENST00000489230 NUP160Q12769 1436 aa20.6■□□□□ 0.89
COL4A5-206ENST00000489230 CEP170Q5SW79 1584 aa20.59■□□□□ 0.89
COL4A5-206ENST00000489230 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
COL4A5-206ENST00000489230 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
COL4A5-206ENST00000489230 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
COL4A5-206ENST00000489230 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
COL4A5-206ENST00000489230 JPH4Q96JJ6 628 aa20.5■□□□□ 0.87
COL4A5-206ENST00000489230 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
COL4A5-206ENST00000489230 PRG4Q92954 1404 aaPredicted RBP20.45■□□□□ 0.86
COL4A5-206ENST00000489230 KIF13AQ9H1H9 1805 aa20.4■□□□□ 0.86
COL4A5-206ENST00000489230 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL4A5-206ENST00000489230 FAM69CQ0P6D2 419 aa20.35■□□□□ 0.85
COL4A5-206ENST00000489230 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
COL4A5-206ENST00000489230 CARMIL2Q6F5E8 1435 aa20.31■□□□□ 0.84
COL4A5-206ENST00000489230 KIF21BO75037 1637 aa20.31■□□□□ 0.84
COL4A5-206ENST00000489230 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
COL4A5-206ENST00000489230 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
COL4A5-206ENST00000489230 MAPKBP1O60336 1514 aa20.27■□□□□ 0.83
COL4A5-206ENST00000489230 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
COL4A5-206ENST00000489230 DIP2BQ9P265 1576 aa20.23■□□□□ 0.83
COL4A5-206ENST00000489230 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
COL4A5-206ENST00000489230 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
COL4A5-206ENST00000489230 EHMT2Q96KQ7 1210 aa20.22■□□□□ 0.83
COL4A5-206ENST00000489230 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
COL4A5-206ENST00000489230 TNIKQ9UKE5 1360 aa20.21■□□□□ 0.83
COL4A5-206ENST00000489230 PTPRGP23470 1445 aa20.19■□□□□ 0.82
COL4A5-206ENST00000489230 KDM6BO15054 1643 aa20.17■□□□□ 0.82
COL4A5-206ENST00000489230 DISP1Q96F81 1524 aa20.15■□□□□ 0.82
COL4A5-206ENST00000489230 RANGAP1P46060 587 aaPredicted RBP20.13■□□□□ 0.81
COL4A5-206ENST00000489230 TSPOAP1O95153 1857 aa20.13■□□□□ 0.81
COL4A5-206ENST00000489230 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
COL4A5-206ENST00000489230 P3H3Q8IVL6 736 aa20.09■□□□□ 0.81
COL4A5-206ENST00000489230 KDM4FA0A1W2PPD8 638 aa20.08■□□□□ 0.81
COL4A5-206ENST00000489230 KIAA0556O60303 1618 aa20.07■□□□□ 0.8
COL4A5-206ENST00000489230 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
COL4A5-206ENST00000489230 EFCAB5A4FU69 1503 aa20.02■□□□□ 0.8
COL4A5-206ENST00000489230 LOC105371045A0A1W2PR82 267 aa20.02■□□□□ 0.8
COL4A5-206ENST00000489230 ABCC2Q92887 1545 aa20.02■□□□□ 0.79
COL4A5-206ENST00000489230 SAMD9Q5K651 1589 aa20■□□□□ 0.79
COL4A5-206ENST00000489230 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
COL4A5-206ENST00000489230 ASXL2Q76L83 1435 aa19.99■□□□□ 0.79
COL4A5-206ENST00000489230 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
COL4A5-206ENST00000489230 GLI2P10070 1586 aa19.95■□□□□ 0.78
COL4A5-206ENST00000489230 CLIP1P30622 1438 aa19.93■□□□□ 0.78
COL4A5-206ENST00000489230 FHOD3Q2V2M9 1422 aa19.93■□□□□ 0.78
COL4A5-206ENST00000489230 FMN1Q68DA7 1419 aa19.92■□□□□ 0.78
COL4A5-206ENST00000489230 ARHGAP35Q9NRY4 1499 aa19.92■□□□□ 0.78
COL4A5-206ENST00000489230 PPRC1Q5VV67 1664 aaKnown RBP19.91■□□□□ 0.78
COL4A5-206ENST00000489230 ABCA8O94911 1581 aa19.87■□□□□ 0.77
COL4A5-206ENST00000489230 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
COL4A5-206ENST00000489230 EPRSP07814 1512 aaKnown RBP19.86■□□□□ 0.77
COL4A5-206ENST00000489230 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
COL4A5-206ENST00000489230 TEX14Q8IWB6 1497 aa19.85■□□□□ 0.77
COL4A5-206ENST00000489230 CEP162Q5TB80 1403 aa19.84■□□□□ 0.77
COL4A5-206ENST00000489230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.83■□□□□ 0.77
COL4A5-206ENST00000489230 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
COL4A5-206ENST00000489230 ATP1B4Q9UN42 357 aaPredicted RBP19.83■□□□□ 0.77
COL4A5-206ENST00000489230 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
COL4A5-206ENST00000489230 MAP3K4Q9Y6R4 1608 aa19.81■□□□□ 0.76
COL4A5-206ENST00000489230 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
COL4A5-206ENST00000489230 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
COL4A5-206ENST00000489230 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
COL4A5-206ENST00000489230 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
COL4A5-206ENST00000489230 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
COL4A5-206ENST00000489230 ATP10BO94823 1461 aa19.78■□□□□ 0.76
COL4A5-206ENST00000489230 ARID3CA6NKF2 412 aa19.76■□□□□ 0.75
COL4A5-206ENST00000489230 NUP153P49790 1475 aaKnown RBP19.74■□□□□ 0.75
COL4A5-206ENST00000489230 WDR7Q9Y4E6 1490 aa19.74■□□□□ 0.75
COL4A5-206ENST00000489230 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
COL4A5-206ENST00000489230 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
COL4A5-206ENST00000489230 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
COL4A5-206ENST00000489230 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
COL4A5-206ENST00000489230 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
COL4A5-206ENST00000489230 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
COL4A5-206ENST00000489230 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
COL4A5-206ENST00000489230 MAGI3Q5TCQ9 1506 aa19.64■□□□□ 0.73
COL4A5-206ENST00000489230 CFAP43Q8NDM7 1665 aa19.64■□□□□ 0.73
COL4A5-206ENST00000489230 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
COL4A5-206ENST00000489230 APLP2Q06481 763 aa19.59■□□□□ 0.73
COL4A5-206ENST00000489230 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
COL4A5-206ENST00000489230 CDK13Q14004 1512 aaKnown RBP19.57■□□□□ 0.72
COL4A5-206ENST00000489230 TROQ12816 1431 aaPredicted RBP19.53■□□□□ 0.72
COL4A5-206ENST00000489230 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
COL4A5-206ENST00000489230 ARAP3Q8WWN8 1544 aa19.49■□□□□ 0.71
COL4A5-206ENST00000489230 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
COL4A5-206ENST00000489230 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
COL4A5-206ENST00000489230 ABCA9Q8IUA7 1624 aa19.45■□□□□ 0.7
COL4A5-206ENST00000489230 LRRIQ1Q96JM4 1722 aa19.44■□□□□ 0.7
COL4A5-206ENST00000489230 EFCAB2Q5VUJ9 269 aa19.42■□□□□ 0.7
COL4A5-206ENST00000489230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.41■□□□□ 0.7
COL4A5-206ENST00000489230 PLCH2O75038 1416 aa19.41■□□□□ 0.7
COL4A5-206ENST00000489230 KIF14Q15058 1648 aa19.4■□□□□ 0.7
COL4A5-206ENST00000489230 RAPGEF3O95398 923 aa19.39■□□□□ 0.69
COL4A5-206ENST00000489230 PTPRMP28827 1452 aa19.39■□□□□ 0.69
COL4A5-206ENST00000489230 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
COL4A5-206ENST00000489230 FBXO41Q8TF61 875 aa19.38■□□□□ 0.69
COL4A5-206ENST00000489230 NEO1Q92859 1461 aa19.37■□□□□ 0.69
COL4A5-206ENST00000489230 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms