RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 NUP160Q12769 1436 aa14.79□□□□□ -0.04
ERGIC3-218ENST00000489071 CEP170Q5SW79 1584 aa14.77□□□□□ -0.05
ERGIC3-218ENST00000489071 PIAS4Q8N2W9 510 aaPredicted RBP14.74□□□□□ -0.05
ERGIC3-218ENST00000489071 SHROOM2Q13796 1616 aa14.72□□□□□ -0.05
ERGIC3-218ENST00000489071 ERCC6L2Q5T890 1561 aa14.72□□□□□ -0.05
ERGIC3-218ENST00000489071 JPH4Q96JJ6 628 aa14.67□□□□□ -0.06
ERGIC3-218ENST00000489071 PRG4Q92954 1404 aaPredicted RBP14.65□□□□□ -0.06
ERGIC3-218ENST00000489071 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
ERGIC3-218ENST00000489071 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
ERGIC3-218ENST00000489071 IGF1RP08069 1367 aa14.6□□□□□ -0.07
ERGIC3-218ENST00000489071 CUL7Q14999 1698 aa14.58□□□□□ -0.07
ERGIC3-218ENST00000489071 KIAA0586Q9BVV6 1533 aa14.56□□□□□ -0.08
ERGIC3-218ENST00000489071 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERGIC3-218ENST00000489071 KIF13AQ9H1H9 1805 aa14.53□□□□□ -0.08
ERGIC3-218ENST00000489071 CARMIL1Q5VZK9 1371 aa14.51□□□□□ -0.09
ERGIC3-218ENST00000489071 KCNA4P22459 653 aa14.5□□□□□ -0.09
ERGIC3-218ENST00000489071 MAPKBP1O60336 1514 aa14.47□□□□□ -0.09
ERGIC3-218ENST00000489071 ABCC10Q5T3U5 1492 aa14.46□□□□□ -0.09
ERGIC3-218ENST00000489071 ADCY10Q96PN6 1610 aa14.46□□□□□ -0.09
ERGIC3-218ENST00000489071 FAM69CQ0P6D2 419 aa14.46□□□□□ -0.09
ERGIC3-218ENST00000489071 PTPRGP23470 1445 aa14.44□□□□□ -0.1
ERGIC3-218ENST00000489071 CARMIL2Q6F5E8 1435 aa14.44□□□□□ -0.1
ERGIC3-218ENST00000489071 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
ERGIC3-218ENST00000489071 IQGAP2Q13576 1575 aa14.41□□□□□ -0.1
ERGIC3-218ENST00000489071 DIP2BQ9P265 1576 aa14.41□□□□□ -0.1
ERGIC3-218ENST00000489071 PPP4R3CPQ6ZMV5 832 aa14.38□□□□□ -0.11
ERGIC3-218ENST00000489071 TTBK1Q5TCY1 1321 aaPredicted RBP14.38□□□□□ -0.11
ERGIC3-218ENST00000489071 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
ERGIC3-218ENST00000489071 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
ERGIC3-218ENST00000489071 ABCC2Q92887 1545 aa14.35□□□□□ -0.11
ERGIC3-218ENST00000489071 UHRF1BP1LA0JNW5 1464 aa14.33□□□□□ -0.12
ERGIC3-218ENST00000489071 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
ERGIC3-218ENST00000489071 DISP1Q96F81 1524 aa14.32□□□□□ -0.12
ERGIC3-218ENST00000489071 UGGT2Q9NYU1 1516 aa14.32□□□□□ -0.12
ERGIC3-218ENST00000489071 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
ERGIC3-218ENST00000489071 KDM6BO15054 1643 aa14.3□□□□□ -0.12
ERGIC3-218ENST00000489071 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
ERGIC3-218ENST00000489071 KIAA0556O60303 1618 aa14.27□□□□□ -0.12
ERGIC3-218ENST00000489071 GLI2P10070 1586 aa14.27□□□□□ -0.12
ERGIC3-218ENST00000489071 CTTNBP2Q8WZ74 1663 aa14.26□□□□□ -0.13
ERGIC3-218ENST00000489071 KDM5BQ9UGL1 1544 aa14.25□□□□□ -0.13
ERGIC3-218ENST00000489071 GOLGA3Q08378 1498 aa14.24□□□□□ -0.13
ERGIC3-218ENST00000489071 ZCCHC11Q5TAX3 1644 aaKnown RBP14.22□□□□□ -0.13
ERGIC3-218ENST00000489071 PPRC1Q5VV67 1664 aaKnown RBP14.21□□□□□ -0.13
ERGIC3-218ENST00000489071 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
ERGIC3-218ENST00000489071 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
ERGIC3-218ENST00000489071 MSH5O43196 834 aa14.19□□□□□ -0.14
ERGIC3-218ENST00000489071 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
ERGIC3-218ENST00000489071 FAM9AQ8IZU1 332 aaPredicted RBP14.19□□□□□ -0.14
ERGIC3-218ENST00000489071 MAP3K4Q9Y6R4 1608 aa14.18□□□□□ -0.14
ERGIC3-218ENST00000489071 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
ERGIC3-218ENST00000489071 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
ERGIC3-218ENST00000489071 KDM4FA0A1W2PPD8 638 aa14.15□□□□□ -0.14
ERGIC3-218ENST00000489071 ABCA8O94911 1581 aa14.14□□□□□ -0.15
ERGIC3-218ENST00000489071 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
ERGIC3-218ENST00000489071 COL17A1Q9UMD9 1497 aaPredicted RBP14.1□□□□□ -0.15
ERGIC3-218ENST00000489071 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
ERGIC3-218ENST00000489071 KCNH8Q96L42 1107 aa14.09□□□□□ -0.15
ERGIC3-218ENST00000489071 CD109Q6YHK3 1445 aa14.08□□□□□ -0.15
ERGIC3-218ENST00000489071 MAGI3Q5TCQ9 1506 aa14.08□□□□□ -0.16
ERGIC3-218ENST00000489071 EEA1Q15075 1411 aa14.07□□□□□ -0.16
ERGIC3-218ENST00000489071 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
ERGIC3-218ENST00000489071 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-218ENST00000489071 ADGRL1O94910 1474 aa14.04□□□□□ -0.16
ERGIC3-218ENST00000489071 SAMD9Q5K651 1589 aa14.04□□□□□ -0.16
ERGIC3-218ENST00000489071 ATP10BO94823 1461 aa14.03□□□□□ -0.16
ERGIC3-218ENST00000489071 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
ERGIC3-218ENST00000489071 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
ERGIC3-218ENST00000489071 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
ERGIC3-218ENST00000489071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
ERGIC3-218ENST00000489071 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
ERGIC3-218ENST00000489071 EHMT2Q96KQ7 1210 aa13.98□□□□□ -0.17
ERGIC3-218ENST00000489071 ABCA9Q8IUA7 1624 aa13.97□□□□□ -0.17
ERGIC3-218ENST00000489071 ARAP3Q8WWN8 1544 aa13.96□□□□□ -0.17
ERGIC3-218ENST00000489071 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
ERGIC3-218ENST00000489071 KIF21BO75037 1637 aa13.93□□□□□ -0.18
ERGIC3-218ENST00000489071 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
ERGIC3-218ENST00000489071 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-218ENST00000489071 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
ERGIC3-218ENST00000489071 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
ERGIC3-218ENST00000489071 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
ERGIC3-218ENST00000489071 NEO1Q92859 1461 aa13.92□□□□□ -0.18
ERGIC3-218ENST00000489071 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-218ENST00000489071 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
ERGIC3-218ENST00000489071 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
ERGIC3-218ENST00000489071 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
ERGIC3-218ENST00000489071 HECW2Q9P2P5 1572 aa13.84□□□□□ -0.19
ERGIC3-218ENST00000489071 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
ERGIC3-218ENST00000489071 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
ERGIC3-218ENST00000489071 DENND4BO75064 1496 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-218ENST00000489071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.81□□□□□ -0.2
ERGIC3-218ENST00000489071 FMN1Q68DA7 1419 aa13.81□□□□□ -0.2
ERGIC3-218ENST00000489071 FANCAO15360 1455 aa13.8□□□□□ -0.2
ERGIC3-218ENST00000489071 FRMPD1Q5SYB0 1578 aa13.8□□□□□ -0.2
ERGIC3-218ENST00000489071 ADAMTSL3P82987 1691 aa13.8□□□□□ -0.2
ERGIC3-218ENST00000489071 CDK11AQ9UQ88 783 aaPredicted RBP13.79□□□□□ -0.2
ERGIC3-218ENST00000489071 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
ERGIC3-218ENST00000489071 RICTORQ6R327 1708 aa13.78□□□□□ -0.2
ERGIC3-218ENST00000489071 ATP1B4Q9UN42 357 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-218ENST00000489071 CDK13Q14004 1512 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms