RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
CCHCR1-215ENST00000488920 RUSC2Q8N2Y8 1516 aa20.48■□□□□ 0.87
CCHCR1-215ENST00000488920 KIAA0586Q9BVV6 1533 aa20.48■□□□□ 0.87
CCHCR1-215ENST00000488920 CUL7Q14999 1698 aa20.47■□□□□ 0.87
CCHCR1-215ENST00000488920 NPM1P06748 294 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCHCR1-215ENST00000488920 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
CCHCR1-215ENST00000488920 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
CCHCR1-215ENST00000488920 PTPRGP23470 1445 aa20.3■□□□□ 0.84
CCHCR1-215ENST00000488920 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
CCHCR1-215ENST00000488920 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
CCHCR1-215ENST00000488920 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
CCHCR1-215ENST00000488920 FAM69CQ0P6D2 419 aa20.25■□□□□ 0.83
CCHCR1-215ENST00000488920 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
CCHCR1-215ENST00000488920 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
CCHCR1-215ENST00000488920 ABCC10Q5T3U5 1492 aa20.18■□□□□ 0.82
CCHCR1-215ENST00000488920 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
CCHCR1-215ENST00000488920 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
CCHCR1-215ENST00000488920 UGGT2Q9NYU1 1516 aa20.15■□□□□ 0.82
CCHCR1-215ENST00000488920 CSRNP3Q8WYN3 585 aa20.13■□□□□ 0.81
CCHCR1-215ENST00000488920 KIF13AQ9H1H9 1805 aa20.13■□□□□ 0.81
CCHCR1-215ENST00000488920 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
CCHCR1-215ENST00000488920 ABCC2Q92887 1545 aa20.11■□□□□ 0.81
CCHCR1-215ENST00000488920 UHRF1BP1LA0JNW5 1464 aa20.08■□□□□ 0.81
CCHCR1-215ENST00000488920 DIP2BQ9P265 1576 aa20.08■□□□□ 0.8
CCHCR1-215ENST00000488920 KIAA0556O60303 1618 aa20.06■□□□□ 0.8
CCHCR1-215ENST00000488920 ASXL2Q76L83 1435 aa20.05■□□□□ 0.8
CCHCR1-215ENST00000488920 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
CCHCR1-215ENST00000488920 GOLGA3Q08378 1498 aa20.03■□□□□ 0.8
CCHCR1-215ENST00000488920 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
CCHCR1-215ENST00000488920 CTTNBP2Q8WZ74 1663 aa20.01■□□□□ 0.79
CCHCR1-215ENST00000488920 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
CCHCR1-215ENST00000488920 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
CCHCR1-215ENST00000488920 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-215ENST00000488920 EEA1Q15075 1411 aa19.97■□□□□ 0.79
CCHCR1-215ENST00000488920 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-215ENST00000488920 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
CCHCR1-215ENST00000488920 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
CCHCR1-215ENST00000488920 ZCCHC11Q5TAX3 1644 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-215ENST00000488920 EPRSP07814 1512 aaKnown RBP19.91■□□□□ 0.78
CCHCR1-215ENST00000488920 GLI2P10070 1586 aa19.91■□□□□ 0.78
CCHCR1-215ENST00000488920 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
CCHCR1-215ENST00000488920 ABCA8O94911 1581 aa19.89■□□□□ 0.77
CCHCR1-215ENST00000488920 KCNH8Q96L42 1107 aa19.89■□□□□ 0.77
CCHCR1-215ENST00000488920 KDM6BO15054 1643 aa19.87■□□□□ 0.77
CCHCR1-215ENST00000488920 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
CCHCR1-215ENST00000488920 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
CCHCR1-215ENST00000488920 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
CCHCR1-215ENST00000488920 ATP10BO94823 1461 aa19.79■□□□□ 0.76
CCHCR1-215ENST00000488920 SAMD9Q5K651 1589 aa19.79■□□□□ 0.76
CCHCR1-215ENST00000488920 MAP3K4Q9Y6R4 1608 aa19.78■□□□□ 0.76
CCHCR1-215ENST00000488920 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
CCHCR1-215ENST00000488920 COL17A1Q9UMD9 1497 aaPredicted RBP19.77■□□□□ 0.76
CCHCR1-215ENST00000488920 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
CCHCR1-215ENST00000488920 CD109Q6YHK3 1445 aa19.76■□□□□ 0.75
CCHCR1-215ENST00000488920 TEX14Q8IWB6 1497 aa19.76■□□□□ 0.75
CCHCR1-215ENST00000488920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
CCHCR1-215ENST00000488920 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
CCHCR1-215ENST00000488920 KIF21BO75037 1637 aa19.75■□□□□ 0.75
CCHCR1-215ENST00000488920 KDM4FA0A1W2PPD8 638 aa19.72■□□□□ 0.75
CCHCR1-215ENST00000488920 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
CCHCR1-215ENST00000488920 MAGI3Q5TCQ9 1506 aa19.68■□□□□ 0.74
CCHCR1-215ENST00000488920 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
CCHCR1-215ENST00000488920 EFCAB5A4FU69 1503 aa19.65■□□□□ 0.74
CCHCR1-215ENST00000488920 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
CCHCR1-215ENST00000488920 CFAP43Q8NDM7 1665 aa19.64■□□□□ 0.73
CCHCR1-215ENST00000488920 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
CCHCR1-215ENST00000488920 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
CCHCR1-215ENST00000488920 ABCA9Q8IUA7 1624 aa19.55■□□□□ 0.72
CCHCR1-215ENST00000488920 ARAP3Q8WWN8 1544 aa19.53■□□□□ 0.72
CCHCR1-215ENST00000488920 RAPGEF3O95398 923 aa19.53■□□□□ 0.72
CCHCR1-215ENST00000488920 PHLDB1Q86UU1 1377 aa19.53■□□□□ 0.72
CCHCR1-215ENST00000488920 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
CCHCR1-215ENST00000488920 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
CCHCR1-215ENST00000488920 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-215ENST00000488920 NEO1Q92859 1461 aa19.48■□□□□ 0.71
CCHCR1-215ENST00000488920 CDK11AQ9UQ88 783 aaPredicted RBP19.45■□□□□ 0.7
CCHCR1-215ENST00000488920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.45■□□□□ 0.7
CCHCR1-215ENST00000488920 AKNAQ7Z591 1439 aa19.42■□□□□ 0.7
CCHCR1-215ENST00000488920 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
CCHCR1-215ENST00000488920 FANCAO15360 1455 aa19.41■□□□□ 0.7
CCHCR1-215ENST00000488920 TTC37Q6PGP7 1564 aa19.39■□□□□ 0.69
CCHCR1-215ENST00000488920 DENND4BO75064 1496 aaPredicted RBP19.38■□□□□ 0.69
CCHCR1-215ENST00000488920 PLCH2O75038 1416 aa19.36■□□□□ 0.69
CCHCR1-215ENST00000488920 CLIP1P30622 1438 aa19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 ARID4BQ4LE39 1312 aaPredicted RBP19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 EFCAB2Q5VUJ9 269 aa19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
CCHCR1-215ENST00000488920 SCAPERQ9BY12 1400 aa19.31■□□□□ 0.68
CCHCR1-215ENST00000488920 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
CCHCR1-215ENST00000488920 KIF14Q15058 1648 aa19.29■□□□□ 0.68
CCHCR1-215ENST00000488920 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
CCHCR1-215ENST00000488920 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
CCHCR1-215ENST00000488920 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
CCHCR1-215ENST00000488920 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
CCHCR1-215ENST00000488920 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
CCHCR1-215ENST00000488920 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
CCHCR1-215ENST00000488920 FYCO1Q9BQS8 1478 aa19.23■□□□□ 0.67
CCHCR1-215ENST00000488920 ARHGAP5Q13017 1502 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms