RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
ATPAF2-207ENST00000488753 CUL7Q14999 1698 aa22.65■■□□□ 1.22
ATPAF2-207ENST00000488753 KIAA0586Q9BVV6 1533 aa22.62■■□□□ 1.21
ATPAF2-207ENST00000488753 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
ATPAF2-207ENST00000488753 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
ATPAF2-207ENST00000488753 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
ATPAF2-207ENST00000488753 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
ATPAF2-207ENST00000488753 IQGAP2Q13576 1575 aa22.38■■□□□ 1.17
ATPAF2-207ENST00000488753 MAPKBP1O60336 1514 aa22.37■■□□□ 1.17
ATPAF2-207ENST00000488753 ADCY10Q96PN6 1610 aa22.37■■□□□ 1.17
ATPAF2-207ENST00000488753 PTPRGP23470 1445 aa22.37■■□□□ 1.17
ATPAF2-207ENST00000488753 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
ATPAF2-207ENST00000488753 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
ATPAF2-207ENST00000488753 KIF13AQ9H1H9 1805 aa22.29■■□□□ 1.16
ATPAF2-207ENST00000488753 FAM69CQ0P6D2 419 aa22.28■■□□□ 1.16
ATPAF2-207ENST00000488753 DISP1Q96F81 1524 aa22.27■■□□□ 1.16
ATPAF2-207ENST00000488753 UGGT2Q9NYU1 1516 aa22.27■■□□□ 1.16
ATPAF2-207ENST00000488753 DIP2BQ9P265 1576 aa22.24■■□□□ 1.15
ATPAF2-207ENST00000488753 ABCC2Q92887 1545 aa22.23■■□□□ 1.15
ATPAF2-207ENST00000488753 UHRF1BP1LA0JNW5 1464 aa22.22■■□□□ 1.15
ATPAF2-207ENST00000488753 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
ATPAF2-207ENST00000488753 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
ATPAF2-207ENST00000488753 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
ATPAF2-207ENST00000488753 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
ATPAF2-207ENST00000488753 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
ATPAF2-207ENST00000488753 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
ATPAF2-207ENST00000488753 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
ATPAF2-207ENST00000488753 KDM5BQ9UGL1 1544 aa22.11■■□□□ 1.13
ATPAF2-207ENST00000488753 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
ATPAF2-207ENST00000488753 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
ATPAF2-207ENST00000488753 GLI2P10070 1586 aa22.06■■□□□ 1.12
ATPAF2-207ENST00000488753 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
ATPAF2-207ENST00000488753 EEA1Q15075 1411 aa22.05■■□□□ 1.12
ATPAF2-207ENST00000488753 KDM6BO15054 1643 aa22■■□□□ 1.11
ATPAF2-207ENST00000488753 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
ATPAF2-207ENST00000488753 ZCCHC11Q5TAX3 1644 aaKnown RBP21.98■■□□□ 1.11
ATPAF2-207ENST00000488753 ABCA8O94911 1581 aa21.97■■□□□ 1.11
ATPAF2-207ENST00000488753 TSPOAP1O95153 1857 aa21.96■■□□□ 1.11
ATPAF2-207ENST00000488753 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
ATPAF2-207ENST00000488753 WDR7Q9Y4E6 1490 aa21.95■■□□□ 1.1
ATPAF2-207ENST00000488753 PPRC1Q5VV67 1664 aaKnown RBP21.9■■□□□ 1.1
ATPAF2-207ENST00000488753 MAP3K4Q9Y6R4 1608 aa21.9■■□□□ 1.1
ATPAF2-207ENST00000488753 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
ATPAF2-207ENST00000488753 SAMD9Q5K651 1589 aa21.86■■□□□ 1.09
ATPAF2-207ENST00000488753 P3H3Q8IVL6 736 aa21.84■■□□□ 1.09
ATPAF2-207ENST00000488753 MAGI3Q5TCQ9 1506 aa21.8■■□□□ 1.08
ATPAF2-207ENST00000488753 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
ATPAF2-207ENST00000488753 ATP10BO94823 1461 aa21.79■■□□□ 1.08
ATPAF2-207ENST00000488753 COL17A1Q9UMD9 1497 aaPredicted RBP21.79■■□□□ 1.08
ATPAF2-207ENST00000488753 KIF21BO75037 1637 aa21.79■■□□□ 1.08
ATPAF2-207ENST00000488753 KCNH8Q96L42 1107 aa21.78■■□□□ 1.08
ATPAF2-207ENST00000488753 CFAP43Q8NDM7 1665 aa21.75■■□□□ 1.07
ATPAF2-207ENST00000488753 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
ATPAF2-207ENST00000488753 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
ATPAF2-207ENST00000488753 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
ATPAF2-207ENST00000488753 EFCAB5A4FU69 1503 aa21.72■■□□□ 1.07
ATPAF2-207ENST00000488753 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
ATPAF2-207ENST00000488753 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
ATPAF2-207ENST00000488753 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
ATPAF2-207ENST00000488753 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
ATPAF2-207ENST00000488753 ABCA9Q8IUA7 1624 aa21.65■■□□□ 1.06
ATPAF2-207ENST00000488753 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.06
ATPAF2-207ENST00000488753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.64■■□□□ 1.05
ATPAF2-207ENST00000488753 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
ATPAF2-207ENST00000488753 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
ATPAF2-207ENST00000488753 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
ATPAF2-207ENST00000488753 ADGRL1O94910 1474 aa21.59■■□□□ 1.05
ATPAF2-207ENST00000488753 PLEKHD1A6NEE1 506 aa21.59■■□□□ 1.05
ATPAF2-207ENST00000488753 NEO1Q92859 1461 aa21.56■■□□□ 1.04
ATPAF2-207ENST00000488753 FMN1Q68DA7 1419 aa21.54■■□□□ 1.04
ATPAF2-207ENST00000488753 ARHGAP35Q9NRY4 1499 aa21.51■■□□□ 1.03
ATPAF2-207ENST00000488753 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
ATPAF2-207ENST00000488753 CDK13Q14004 1512 aaKnown RBP21.45■■□□□ 1.02
ATPAF2-207ENST00000488753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATPAF2-207ENST00000488753 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
ATPAF2-207ENST00000488753 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
ATPAF2-207ENST00000488753 FANCAO15360 1455 aa21.42■■□□□ 1.02
ATPAF2-207ENST00000488753 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
ATPAF2-207ENST00000488753 AKNAQ7Z591 1439 aa21.4■■□□□ 1.02
ATPAF2-207ENST00000488753 CFAP74Q9C0B2 1584 aa21.4■■□□□ 1.02
ATPAF2-207ENST00000488753 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
ATPAF2-207ENST00000488753 DENND4BO75064 1496 aaPredicted RBP21.39■■□□□ 1.01
ATPAF2-207ENST00000488753 FRMPD1Q5SYB0 1578 aa21.38■■□□□ 1.01
ATPAF2-207ENST00000488753 TTC37Q6PGP7 1564 aa21.38■■□□□ 1.01
ATPAF2-207ENST00000488753 PLCH2O75038 1416 aa21.36■■□□□ 1.01
ATPAF2-207ENST00000488753 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
ATPAF2-207ENST00000488753 CLIP1P30622 1438 aa21.3■■□□□ 1
ATPAF2-207ENST00000488753 RICTORQ6R327 1708 aa21.3■■□□□ 1
ATPAF2-207ENST00000488753 CASKIN1Q8WXD9 1431 aa21.29■■□□□ 1
ATPAF2-207ENST00000488753 ZMYM4Q5VZL5 1548 aa21.29■■□□□ 1
ATPAF2-207ENST00000488753 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
ATPAF2-207ENST00000488753 MAGI2Q86UL8 1455 aa21.28■■□□□ 1
ATPAF2-207ENST00000488753 EFCAB2Q5VUJ9 269 aa21.28■■□□□ 1
ATPAF2-207ENST00000488753 CCDC18Q5T9S5 1454 aa21.27■■□□□ 1
ATPAF2-207ENST00000488753 KIF14Q15058 1648 aa21.27■■□□□ 1
ATPAF2-207ENST00000488753 POGZQ7Z3K3 1410 aa21.26■□□□□ 0.99
ATPAF2-207ENST00000488753 SCAPERQ9BY12 1400 aa21.26■□□□□ 0.99
ATPAF2-207ENST00000488753 ADAMTSL3P82987 1691 aa21.24■□□□□ 0.99
ATPAF2-207ENST00000488753 ARID4BQ4LE39 1312 aaPredicted RBP21.24■□□□□ 0.99
ATPAF2-207ENST00000488753 HECW2Q9P2P5 1572 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms