RNA–Protein interactions for RNA: ENST00000488716.1

NME9-209, Transcript of NME/NM23 family member 9, humanhuman

TSL 3

Gene NME9, Length 688 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-209ENST00000488716 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
NME9-209ENST00000488716 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
NME9-209ENST00000488716 RGL2O15211 777 aa14.05□□□□□ -0.16
NME9-209ENST00000488716 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
NME9-209ENST00000488716 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
NME9-209ENST00000488716 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
NME9-209ENST00000488716 PRR29P0C7W0 189 aa14□□□□□ -0.17
NME9-209ENST00000488716 TRIM41Q8WV44 630 aa14□□□□□ -0.17
NME9-209ENST00000488716 EIF4G1Q04637 1599 aaKnown RBP13.98□□□□□ -0.17
NME9-209ENST00000488716 GSE1Q14687 1217 aa13.97□□□□□ -0.17
NME9-209ENST00000488716 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
NME9-209ENST00000488716 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
NME9-209ENST00000488716 WIZO95785 1651 aa13.94□□□□□ -0.18
NME9-209ENST00000488716 PAXIP1Q6ZW49 1069 aaPredicted RBP13.93□□□□□ -0.18
NME9-209ENST00000488716 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
NME9-209ENST00000488716 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
NME9-209ENST00000488716 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
NME9-209ENST00000488716 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
NME9-209ENST00000488716 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
NME9-209ENST00000488716 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
NME9-209ENST00000488716 NUBP1P53384 320 aa13.89□□□□□ -0.19
NME9-209ENST00000488716 CREBZFQ9NS37 354 aa13.89□□□□□ -0.19
NME9-209ENST00000488716 DNAJC5Q9H3Z4 198 aa13.88□□□□□ -0.19
NME9-209ENST00000488716 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
NME9-209ENST00000488716 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
NME9-209ENST00000488716 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
NME9-209ENST00000488716 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
NME9-209ENST00000488716 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
NME9-209ENST00000488716 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
NME9-209ENST00000488716 PITPNM1O00562 1244 aa13.79□□□□□ -0.2
NME9-209ENST00000488716 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
NME9-209ENST00000488716 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
NME9-209ENST00000488716 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
NME9-209ENST00000488716 HS6ST3Q8IZP7 471 aa13.74□□□□□ -0.21
NME9-209ENST00000488716 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
NME9-209ENST00000488716 RNF25Q96BH1 459 aaPredicted RBP13.73□□□□□ -0.21
NME9-209ENST00000488716 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
NME9-209ENST00000488716 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
NME9-209ENST00000488716 BCANQ96GW7 911 aa13.68□□□□□ -0.22
NME9-209ENST00000488716 CHRM1P11229 460 aaPredicted RBP13.65□□□□□ -0.22
NME9-209ENST00000488716 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
NME9-209ENST00000488716 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
NME9-209ENST00000488716 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
NME9-209ENST00000488716 STK25O00506 426 aa13.61□□□□□ -0.23
NME9-209ENST00000488716 PYGBP11216 843 aa13.61□□□□□ -0.23
NME9-209ENST00000488716 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
NME9-209ENST00000488716 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
NME9-209ENST00000488716 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
NME9-209ENST00000488716 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
NME9-209ENST00000488716 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
NME9-209ENST00000488716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
NME9-209ENST00000488716 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
NME9-209ENST00000488716 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
NME9-209ENST00000488716 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
NME9-209ENST00000488716 CFTRP13569 1480 aa13.49□□□□□ -0.25
NME9-209ENST00000488716 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
NME9-209ENST00000488716 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
NME9-209ENST00000488716 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
NME9-209ENST00000488716 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
NME9-209ENST00000488716 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
NME9-209ENST00000488716 FXR2P51116 673 aaKnown RBP eCLIP13.4□□□□□ -0.26
NME9-209ENST00000488716 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
NME9-209ENST00000488716 LAMC3Q9Y6N6 1575 aa13.37□□□□□ -0.27
NME9-209ENST00000488716 PRDM2Q13029 1718 aa13.37□□□□□ -0.27
NME9-209ENST00000488716 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
NME9-209ENST00000488716 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
NME9-209ENST00000488716 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
NME9-209ENST00000488716 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
NME9-209ENST00000488716 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
NME9-209ENST00000488716 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
NME9-209ENST00000488716 NBR1Q14596 966 aa13.31□□□□□ -0.28
NME9-209ENST00000488716 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
NME9-209ENST00000488716 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
NME9-209ENST00000488716 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
NME9-209ENST00000488716 PSEN1P49768 467 aa13.28□□□□□ -0.28
NME9-209ENST00000488716 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
NME9-209ENST00000488716 NESP48681 1621 aa13.28□□□□□ -0.28
NME9-209ENST00000488716 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
NME9-209ENST00000488716 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
NME9-209ENST00000488716 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
NME9-209ENST00000488716 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
NME9-209ENST00000488716 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
NME9-209ENST00000488716 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
NME9-209ENST00000488716 CUX1P39880 1505 aa13.21□□□□□ -0.29
NME9-209ENST00000488716 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
NME9-209ENST00000488716 MAP3K13O43283 966 aa13.19□□□□□ -0.3
NME9-209ENST00000488716 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
NME9-209ENST00000488716 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
NME9-209ENST00000488716 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
NME9-209ENST00000488716 DNMBPQ6XZF7 1577 aa13.16□□□□□ -0.3
NME9-209ENST00000488716 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
NME9-209ENST00000488716 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
NME9-209ENST00000488716 EEA1Q15075 1411 aa13.13□□□□□ -0.31
NME9-209ENST00000488716 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
NME9-209ENST00000488716 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
NME9-209ENST00000488716 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
NME9-209ENST00000488716 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
NME9-209ENST00000488716 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
NME9-209ENST00000488716 NLRP6P59044 892 aa13.09□□□□□ -0.31
NME9-209ENST00000488716 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms