RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
CTDSP1-209ENST00000488627 KIAA0586Q9BVV6 1533 aa27.06■■□□□ 1.92
CTDSP1-209ENST00000488627 PRG4Q92954 1404 aaPredicted RBP27.03■■□□□ 1.92
CTDSP1-209ENST00000488627 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
CTDSP1-209ENST00000488627 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
CTDSP1-209ENST00000488627 PRXQ9BXM0 1461 aa26.89■■□□□ 1.9
CTDSP1-209ENST00000488627 CSRNP3Q8WYN3 585 aa26.85■■□□□ 1.89
CTDSP1-209ENST00000488627 IQGAP2Q13576 1575 aa26.78■■□□□ 1.88
CTDSP1-209ENST00000488627 EEA1Q15075 1411 aa26.76■■□□□ 1.87
CTDSP1-209ENST00000488627 TRHP20396 242 aaPredicted RBP26.76■■□□□ 1.87
CTDSP1-209ENST00000488627 CARMIL2Q6F5E8 1435 aa26.72■■□□□ 1.87
CTDSP1-209ENST00000488627 PTPRGP23470 1445 aa26.71■■□□□ 1.87
CTDSP1-209ENST00000488627 DISP1Q96F81 1524 aa26.7■■□□□ 1.87
CTDSP1-209ENST00000488627 UGGT2Q9NYU1 1516 aa26.7■■□□□ 1.87
CTDSP1-209ENST00000488627 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.86
CTDSP1-209ENST00000488627 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
CTDSP1-209ENST00000488627 TTBK1Q5TCY1 1321 aaPredicted RBP26.62■■□□□ 1.85
CTDSP1-209ENST00000488627 NPM1P06748 294 aaKnown RBP eCLIP26.57■■□□□ 1.84
CTDSP1-209ENST00000488627 ADCY10Q96PN6 1610 aa26.57■■□□□ 1.84
CTDSP1-209ENST00000488627 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
CTDSP1-209ENST00000488627 CTTNBP2Q8WZ74 1663 aa26.53■■□□□ 1.84
CTDSP1-209ENST00000488627 GOLGA3Q08378 1498 aa26.5■■□□□ 1.83
CTDSP1-209ENST00000488627 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
CTDSP1-209ENST00000488627 UHRF1BP1LA0JNW5 1464 aa26.49■■□□□ 1.83
CTDSP1-209ENST00000488627 MAPKBP1O60336 1514 aa26.45■■□□□ 1.83
CTDSP1-209ENST00000488627 ABCC2Q92887 1545 aa26.44■■□□□ 1.82
CTDSP1-209ENST00000488627 KIF21BO75037 1637 aa26.44■■□□□ 1.82
CTDSP1-209ENST00000488627 P3H3Q8IVL6 736 aa26.41■■□□□ 1.82
CTDSP1-209ENST00000488627 ABCC10Q5T3U5 1492 aa26.4■■□□□ 1.82
CTDSP1-209ENST00000488627 FAM69CQ0P6D2 419 aa26.39■■□□□ 1.82
CTDSP1-209ENST00000488627 PLB1Q6P1J6 1458 aa26.38■■□□□ 1.81
CTDSP1-209ENST00000488627 KDM5BQ9UGL1 1544 aa26.36■■□□□ 1.81
CTDSP1-209ENST00000488627 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
CTDSP1-209ENST00000488627 RANGAP1P46060 587 aaPredicted RBP26.33■■□□□ 1.81
CTDSP1-209ENST00000488627 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
CTDSP1-209ENST00000488627 ASXL2Q76L83 1435 aa26.31■■□□□ 1.8
CTDSP1-209ENST00000488627 ABCA8O94911 1581 aa26.31■■□□□ 1.8
CTDSP1-209ENST00000488627 SAMD9Q5K651 1589 aa26.31■■□□□ 1.8
CTDSP1-209ENST00000488627 DIP2BQ9P265 1576 aa26.27■■□□□ 1.8
CTDSP1-209ENST00000488627 KIF13AQ9H1H9 1805 aa26.26■■□□□ 1.79
CTDSP1-209ENST00000488627 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
CTDSP1-209ENST00000488627 ZCCHC11Q5TAX3 1644 aaKnown RBP26.19■■□□□ 1.78
CTDSP1-209ENST00000488627 ATP10BO94823 1461 aa26.16■■□□□ 1.78
CTDSP1-209ENST00000488627 EFCAB5A4FU69 1503 aa26.15■■□□□ 1.78
CTDSP1-209ENST00000488627 EPRSP07814 1512 aaKnown RBP26.14■■□□□ 1.78
CTDSP1-209ENST00000488627 ARID3CA6NKF2 412 aa26.14■■□□□ 1.78
CTDSP1-209ENST00000488627 GLI2P10070 1586 aa26.13■■□□□ 1.77
CTDSP1-209ENST00000488627 WDR7Q9Y4E6 1490 aa26.12■■□□□ 1.77
CTDSP1-209ENST00000488627 ARHGAP35Q9NRY4 1499 aa26.1■■□□□ 1.77
CTDSP1-209ENST00000488627 NUP153P49790 1475 aaKnown RBP26.07■■□□□ 1.76
CTDSP1-209ENST00000488627 RAPGEF6Q8TEU7 1601 aa26.06■■□□□ 1.76
CTDSP1-209ENST00000488627 KCNH8Q96L42 1107 aa26.06■■□□□ 1.76
CTDSP1-209ENST00000488627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
CTDSP1-209ENST00000488627 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
CTDSP1-209ENST00000488627 FMN1Q68DA7 1419 aa25.97■■□□□ 1.75
CTDSP1-209ENST00000488627 MAP3K4Q9Y6R4 1608 aa25.96■■□□□ 1.75
CTDSP1-209ENST00000488627 TSPOAP1O95153 1857 aa25.94■■□□□ 1.74
CTDSP1-209ENST00000488627 PPRC1Q5VV67 1664 aaKnown RBP25.94■■□□□ 1.74
CTDSP1-209ENST00000488627 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
CTDSP1-209ENST00000488627 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
CTDSP1-209ENST00000488627 MAGI3Q5TCQ9 1506 aa25.88■■□□□ 1.73
CTDSP1-209ENST00000488627 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
CTDSP1-209ENST00000488627 TEX14Q8IWB6 1497 aa25.87■■□□□ 1.73
CTDSP1-209ENST00000488627 CLIP1P30622 1438 aa25.87■■□□□ 1.73
CTDSP1-209ENST00000488627 ATP1B4Q9UN42 357 aaPredicted RBP25.86■■□□□ 1.73
CTDSP1-209ENST00000488627 KDM6BO15054 1643 aa25.85■■□□□ 1.73
CTDSP1-209ENST00000488627 CDK13Q14004 1512 aaKnown RBP25.83■■□□□ 1.73
CTDSP1-209ENST00000488627 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
CTDSP1-209ENST00000488627 CFAP43Q8NDM7 1665 aa25.8■■□□□ 1.72
CTDSP1-209ENST00000488627 ABCA9Q8IUA7 1624 aa25.78■■□□□ 1.72
CTDSP1-209ENST00000488627 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
CTDSP1-209ENST00000488627 HECW1Q76N89 1606 aa25.77■■□□□ 1.72
CTDSP1-209ENST00000488627 CDK11AQ9UQ88 783 aaPredicted RBP25.74■■□□□ 1.71
CTDSP1-209ENST00000488627 CEP162Q5TB80 1403 aa25.71■■□□□ 1.71
CTDSP1-209ENST00000488627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.69■■□□□ 1.73e-9■■■■■ 48.7
CTDSP1-209ENST00000488627 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
CTDSP1-209ENST00000488627 PCF11O94913 1555 aaKnown RBP25.68■■□□□ 1.7
CTDSP1-209ENST00000488627 ARAP3Q8WWN8 1544 aa25.67■■□□□ 1.7
CTDSP1-209ENST00000488627 TROQ12816 1431 aaPredicted RBP25.66■■□□□ 1.7
CTDSP1-209ENST00000488627 FYCO1Q9BQS8 1478 aa25.66■■□□□ 1.7
CTDSP1-209ENST00000488627 NEO1Q92859 1461 aa25.65■■□□□ 1.7
CTDSP1-209ENST00000488627 CCDC18Q5T9S5 1454 aa25.63■■□□□ 1.69
CTDSP1-209ENST00000488627 LRRIQ1Q96JM4 1722 aa25.61■■□□□ 1.69
CTDSP1-209ENST00000488627 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
CTDSP1-209ENST00000488627 PLCH2O75038 1416 aa25.6■■□□□ 1.69
CTDSP1-209ENST00000488627 RAPGEF3O95398 923 aa25.59■■□□□ 1.69
CTDSP1-209ENST00000488627 AKNAQ7Z591 1439 aa25.56■■□□□ 1.68
CTDSP1-209ENST00000488627 FANCAO15360 1455 aa25.56■■□□□ 1.68
CTDSP1-209ENST00000488627 KIF14Q15058 1648 aa25.53■■□□□ 1.68
CTDSP1-209ENST00000488627 KDM4FA0A1W2PPD8 638 aa25.53■■□□□ 1.68
CTDSP1-209ENST00000488627 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
CTDSP1-209ENST00000488627 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
CTDSP1-209ENST00000488627 DENND4BO75064 1496 aaPredicted RBP25.47■■□□□ 1.67
CTDSP1-209ENST00000488627 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
CTDSP1-209ENST00000488627 SCAPERQ9BY12 1400 aa25.43■■□□□ 1.66
CTDSP1-209ENST00000488627 CFAP74Q9C0B2 1584 aa25.41■■□□□ 1.66
CTDSP1-209ENST00000488627 VPS8Q8N3P4 1428 aa25.41■■□□□ 1.66
CTDSP1-209ENST00000488627 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
CTDSP1-209ENST00000488627 MTUS2Q5JR59 1369 aa25.4■■□□□ 1.66
CTDSP1-209ENST00000488627 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms