RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
ZEB1-206ENST00000488625 SIN3AQ96ST3 1273 aa13.47□□□□□ -0.25
ZEB1-206ENST00000488625 CUX2O14529 1486 aa13.47□□□□□ -0.25
ZEB1-206ENST00000488625 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
ZEB1-206ENST00000488625 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
ZEB1-206ENST00000488625 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
ZEB1-206ENST00000488625 SETD5Q9C0A6 1442 aa13.43□□□□□ -0.26
ZEB1-206ENST00000488625 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
ZEB1-206ENST00000488625 CARMIL1Q5VZK9 1371 aa13.42□□□□□ -0.26
ZEB1-206ENST00000488625 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
ZEB1-206ENST00000488625 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
ZEB1-206ENST00000488625 KIF21BO75037 1637 aa13.39□□□□□ -0.27
ZEB1-206ENST00000488625 ARHGAP35Q9NRY4 1499 aa13.39□□□□□ -0.27
ZEB1-206ENST00000488625 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
ZEB1-206ENST00000488625 EIF4G2P78344 907 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZEB1-206ENST00000488625 RAB3GAP2Q9H2M9 1393 aa13.39□□□□□ -0.27
ZEB1-206ENST00000488625 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
ZEB1-206ENST00000488625 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
ZEB1-206ENST00000488625 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
ZEB1-206ENST00000488625 SYNJ1O43426 1573 aa13.34□□□□□ -0.27
ZEB1-206ENST00000488625 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
ZEB1-206ENST00000488625 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
ZEB1-206ENST00000488625 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
ZEB1-206ENST00000488625 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
ZEB1-206ENST00000488625 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
ZEB1-206ENST00000488625 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.28
ZEB1-206ENST00000488625 CANXP27824 592 aaKnown RBP13.27□□□□□ -0.29
ZEB1-206ENST00000488625 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
ZEB1-206ENST00000488625 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
ZEB1-206ENST00000488625 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
ZEB1-206ENST00000488625 NBR1Q14596 966 aa13.25□□□□□ -0.29
ZEB1-206ENST00000488625 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
ZEB1-206ENST00000488625 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
ZEB1-206ENST00000488625 TSPY4P0CV99 314 aa13.21□□□□□ -0.29
ZEB1-206ENST00000488625 TSPY10P0CW01 314 aa13.21□□□□□ -0.29
ZEB1-206ENST00000488625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
ZEB1-206ENST00000488625 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.3
ZEB1-206ENST00000488625 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
ZEB1-206ENST00000488625 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
ZEB1-206ENST00000488625 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
ZEB1-206ENST00000488625 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
ZEB1-206ENST00000488625 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
ZEB1-206ENST00000488625 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
ZEB1-206ENST00000488625 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
ZEB1-206ENST00000488625 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
ZEB1-206ENST00000488625 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
ZEB1-206ENST00000488625 SENP3-EIF4A1A0A087X0R7 540 aa13.17□□□□□ -0.3
ZEB1-206ENST00000488625 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
ZEB1-206ENST00000488625 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
ZEB1-206ENST00000488625 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
ZEB1-206ENST00000488625 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZEB1-206ENST00000488625 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
ZEB1-206ENST00000488625 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
ZEB1-206ENST00000488625 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
ZEB1-206ENST00000488625 FOXD1Q16676 465 aa13.11□□□□□ -0.31
ZEB1-206ENST00000488625 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
ZEB1-206ENST00000488625 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
ZEB1-206ENST00000488625 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
ZEB1-206ENST00000488625 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
ZEB1-206ENST00000488625 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
ZEB1-206ENST00000488625 FANCD2Q9BXW9 1451 aa13.09□□□□□ -0.31
ZEB1-206ENST00000488625 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.31
ZEB1-206ENST00000488625 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
ZEB1-206ENST00000488625 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.32
ZEB1-206ENST00000488625 IGF1RP08069 1367 aa13.07□□□□□ -0.32
ZEB1-206ENST00000488625 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
ZEB1-206ENST00000488625 ARID4BQ4LE39 1312 aaPredicted RBP13.07□□□□□ -0.32
ZEB1-206ENST00000488625 CUX1P39880 1505 aa13.06□□□□□ -0.32
ZEB1-206ENST00000488625 NEFMP07197 916 aa13.06□□□□□ -0.32
ZEB1-206ENST00000488625 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
ZEB1-206ENST00000488625 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
ZEB1-206ENST00000488625 PRXQ9BXM0 1461 aa13.05□□□□□ -0.32
ZEB1-206ENST00000488625 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
ZEB1-206ENST00000488625 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
ZEB1-206ENST00000488625 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
ZEB1-206ENST00000488625 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
ZEB1-206ENST00000488625 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
ZEB1-206ENST00000488625 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
ZEB1-206ENST00000488625 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
ZEB1-206ENST00000488625 ERICH6BQ5W0A0 696 aa13□□□□□ -0.33
ZEB1-206ENST00000488625 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
ZEB1-206ENST00000488625 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
ZEB1-206ENST00000488625 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
ZEB1-206ENST00000488625 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
ZEB1-206ENST00000488625 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
ZEB1-206ENST00000488625 UPF2Q9HAU5 1272 aaKnown RBP12.98□□□□□ -0.33
ZEB1-206ENST00000488625 HMGXB3Q12766 1538 aa12.98□□□□□ -0.33
ZEB1-206ENST00000488625 DCAF11Q8TEB1 546 aa12.98□□□□□ -0.33
ZEB1-206ENST00000488625 CFTRP13569 1480 aa12.98□□□□□ -0.33
ZEB1-206ENST00000488625 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
ZEB1-206ENST00000488625 PKD2Q13563 968 aa12.97□□□□□ -0.33
ZEB1-206ENST00000488625 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
ZEB1-206ENST00000488625 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
ZEB1-206ENST00000488625 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
ZEB1-206ENST00000488625 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
ZEB1-206ENST00000488625 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
ZEB1-206ENST00000488625 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
ZEB1-206ENST00000488625 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
ZEB1-206ENST00000488625 WDR97A6NE52 1622 aa12.93□□□□□ -0.34
ZEB1-206ENST00000488625 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms