RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
SNU13-208ENST00000488571 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
SNU13-208ENST00000488571 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
SNU13-208ENST00000488571 NUP160Q12769 1436 aa20.51■□□□□ 0.87
SNU13-208ENST00000488571 SHROOM2Q13796 1616 aa20.45■□□□□ 0.87
SNU13-208ENST00000488571 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
SNU13-208ENST00000488571 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
SNU13-208ENST00000488571 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
SNU13-208ENST00000488571 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
SNU13-208ENST00000488571 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
SNU13-208ENST00000488571 RUSC2Q8N2Y8 1516 aa20.27■□□□□ 0.84
SNU13-208ENST00000488571 KIF13AQ9H1H9 1805 aa20.27■□□□□ 0.84
SNU13-208ENST00000488571 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
SNU13-208ENST00000488571 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
SNU13-208ENST00000488571 ADCY10Q96PN6 1610 aa20.13■□□□□ 0.81
SNU13-208ENST00000488571 IGF1RP08069 1367 aa20.12■□□□□ 0.81
SNU13-208ENST00000488571 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
SNU13-208ENST00000488571 KIAA0586Q9BVV6 1533 aa20.12■□□□□ 0.81
SNU13-208ENST00000488571 ABCC10Q5T3U5 1492 aa20.11■□□□□ 0.81
SNU13-208ENST00000488571 CUL7Q14999 1698 aa20.1■□□□□ 0.81
SNU13-208ENST00000488571 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
SNU13-208ENST00000488571 DIP2BQ9P265 1576 aa20.08■□□□□ 0.81
SNU13-208ENST00000488571 FAM69CQ0P6D2 419 aa20.06■□□□□ 0.8
SNU13-208ENST00000488571 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
SNU13-208ENST00000488571 NPM1P06748 294 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNU13-208ENST00000488571 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
SNU13-208ENST00000488571 PTPRGP23470 1445 aa19.93■□□□□ 0.78
SNU13-208ENST00000488571 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
SNU13-208ENST00000488571 KDM6BO15054 1643 aa19.92■□□□□ 0.78
SNU13-208ENST00000488571 IQGAP2Q13576 1575 aa19.91■□□□□ 0.78
SNU13-208ENST00000488571 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
SNU13-208ENST00000488571 ABCC2Q92887 1545 aa19.88■□□□□ 0.77
SNU13-208ENST00000488571 CARMIL2Q6F5E8 1435 aa19.88■□□□□ 0.77
SNU13-208ENST00000488571 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
SNU13-208ENST00000488571 DISP1Q96F81 1524 aa19.85■□□□□ 0.77
SNU13-208ENST00000488571 UHRF1BP1LA0JNW5 1464 aa19.83■□□□□ 0.76
SNU13-208ENST00000488571 PPRC1Q5VV67 1664 aaKnown RBP19.83■□□□□ 0.76
SNU13-208ENST00000488571 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
SNU13-208ENST00000488571 GLI2P10070 1586 aa19.82■□□□□ 0.76
SNU13-208ENST00000488571 KDM4FA0A1W2PPD8 638 aa19.81■□□□□ 0.76
SNU13-208ENST00000488571 PLB1Q6P1J6 1458 aa19.8■□□□□ 0.76
SNU13-208ENST00000488571 UACAQ9BZF9 1416 aa19.79■□□□□ 0.76
SNU13-208ENST00000488571 UGGT2Q9NYU1 1516 aa19.78■□□□□ 0.76
SNU13-208ENST00000488571 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
SNU13-208ENST00000488571 KDM5BQ9UGL1 1544 aa19.76■□□□□ 0.75
SNU13-208ENST00000488571 KIAA0556O60303 1618 aa19.74■□□□□ 0.75
SNU13-208ENST00000488571 ZCCHC11Q5TAX3 1644 aaKnown RBP19.72■□□□□ 0.75
SNU13-208ENST00000488571 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
SNU13-208ENST00000488571 MAP3K4Q9Y6R4 1608 aa19.71■□□□□ 0.75
SNU13-208ENST00000488571 COL17A1Q9UMD9 1497 aaPredicted RBP19.69■□□□□ 0.74
SNU13-208ENST00000488571 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
SNU13-208ENST00000488571 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
SNU13-208ENST00000488571 ADGRL1O94910 1474 aa19.61■□□□□ 0.73
SNU13-208ENST00000488571 TEX14Q8IWB6 1497 aa19.61■□□□□ 0.73
SNU13-208ENST00000488571 WDR7Q9Y4E6 1490 aa19.6■□□□□ 0.73
SNU13-208ENST00000488571 ABCA8O94911 1581 aa19.57■□□□□ 0.72
SNU13-208ENST00000488571 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
SNU13-208ENST00000488571 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
SNU13-208ENST00000488571 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
SNU13-208ENST00000488571 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.72
SNU13-208ENST00000488571 MAGI3Q5TCQ9 1506 aa19.51■□□□□ 0.71
SNU13-208ENST00000488571 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
SNU13-208ENST00000488571 KCNH8Q96L42 1107 aa19.46■□□□□ 0.71
SNU13-208ENST00000488571 RNF216Q9NWF9 866 aaPredicted RBP19.43■□□□□ 0.7
SNU13-208ENST00000488571 HECW2Q9P2P5 1572 aa19.4■□□□□ 0.7
SNU13-208ENST00000488571 ATP10BO94823 1461 aa19.4■□□□□ 0.7
SNU13-208ENST00000488571 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
SNU13-208ENST00000488571 SAMD9Q5K651 1589 aa19.38■□□□□ 0.69
SNU13-208ENST00000488571 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
SNU13-208ENST00000488571 ARAP3Q8WWN8 1544 aa19.36■□□□□ 0.69
SNU13-208ENST00000488571 ARID3CA6NKF2 412 aa19.36■□□□□ 0.69
SNU13-208ENST00000488571 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
SNU13-208ENST00000488571 KIF21BO75037 1637 aa19.36■□□□□ 0.69
SNU13-208ENST00000488571 ABCA9Q8IUA7 1624 aa19.35■□□□□ 0.69
SNU13-208ENST00000488571 RAPGEF6Q8TEU7 1601 aa19.32■□□□□ 0.68
SNU13-208ENST00000488571 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
SNU13-208ENST00000488571 CSRNP3Q8WYN3 585 aa19.3■□□□□ 0.68
SNU13-208ENST00000488571 FAM9AQ8IZU1 332 aaPredicted RBP19.27■□□□□ 0.68
SNU13-208ENST00000488571 PHLDB1Q86UU1 1377 aa19.26■□□□□ 0.67
SNU13-208ENST00000488571 NUP153P49790 1475 aaKnown RBP19.26■□□□□ 0.67
SNU13-208ENST00000488571 NEO1Q92859 1461 aa19.24■□□□□ 0.67
SNU13-208ENST00000488571 FRMPD1Q5SYB0 1578 aa19.23■□□□□ 0.67
SNU13-208ENST00000488571 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
SNU13-208ENST00000488571 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
SNU13-208ENST00000488571 FHOD3Q2V2M9 1422 aa19.2■□□□□ 0.66
SNU13-208ENST00000488571 EEA1Q15075 1411 aa19.19■□□□□ 0.66
SNU13-208ENST00000488571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
SNU13-208ENST00000488571 HNRNPUL2Q1KMD3 747 aaKnown RBP19.18■□□□□ 0.66
SNU13-208ENST00000488571 PTPRMP28827 1452 aa19.17■□□□□ 0.66
SNU13-208ENST00000488571 RANGAP1P46060 587 aaPredicted RBP19.16■□□□□ 0.66
SNU13-208ENST00000488571 BCORL1Q5H9F3 1711 aa19.16■□□□□ 0.66
SNU13-208ENST00000488571 RICTORQ6R327 1708 aa19.13■□□□□ 0.65
SNU13-208ENST00000488571 MADDQ8WXG6 1647 aa19.12■□□□□ 0.65
SNU13-208ENST00000488571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNU13-208ENST00000488571 ARHGEF40Q8TER5 1519 aa19.11■□□□□ 0.65
SNU13-208ENST00000488571 EFCAB5A4FU69 1503 aa19.1■□□□□ 0.65
SNU13-208ENST00000488571 TTC37Q6PGP7 1564 aa19.1■□□□□ 0.65
SNU13-208ENST00000488571 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
SNU13-208ENST00000488571 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
SNU13-208ENST00000488571 AKNAQ7Z591 1439 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms