RNA–Protein interactions for RNA: ENST00000488203.1

CIT-205, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 2

Gene CIT, Length 2,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-205ENST00000488203 CUL7Q14999 1698 aa14.65□□□□□ -0.06
CIT-205ENST00000488203 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.07
CIT-205ENST00000488203 ERCC6Q03468 1493 aa14.6□□□□□ -0.07
CIT-205ENST00000488203 ATP1B4Q9UN42 357 aaPredicted RBP14.6□□□□□ -0.07
CIT-205ENST00000488203 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
CIT-205ENST00000488203 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
CIT-205ENST00000488203 WDR62O43379 1518 aa14.56□□□□□ -0.08
CIT-205ENST00000488203 CTTNBP2Q8WZ74 1663 aa14.54□□□□□ -0.08
CIT-205ENST00000488203 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
CIT-205ENST00000488203 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
CIT-205ENST00000488203 PBRM1Q86U86 1689 aa14.52□□□□□ -0.09
CIT-205ENST00000488203 FHAD1B1AJZ9 1412 aa14.51□□□□□ -0.09
CIT-205ENST00000488203 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
CIT-205ENST00000488203 PCF11O94913 1555 aaKnown RBP14.5□□□□□ -0.09
CIT-205ENST00000488203 EFCAB5A4FU69 1503 aa14.5□□□□□ -0.09
CIT-205ENST00000488203 TIAM1Q13009 1591 aa14.5□□□□□ -0.09
CIT-205ENST00000488203 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
CIT-205ENST00000488203 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CIT-205ENST00000488203 LRRC9Q6ZRR7 1453 aa14.46□□□□□ -0.09
CIT-205ENST00000488203 ITGAEP38570 1179 aa14.46□□□□□ -0.09
CIT-205ENST00000488203 CASKIN1Q8WXD9 1431 aa14.45□□□□□ -0.1
CIT-205ENST00000488203 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
CIT-205ENST00000488203 MAP3K1Q13233 1512 aa14.45□□□□□ -0.1
CIT-205ENST00000488203 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
CIT-205ENST00000488203 SAMD9Q5K651 1589 aa14.43□□□□□ -0.1
CIT-205ENST00000488203 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
CIT-205ENST00000488203 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
CIT-205ENST00000488203 FYCO1Q9BQS8 1478 aa14.43□□□□□ -0.1
CIT-205ENST00000488203 FMN1Q68DA7 1419 aa14.43□□□□□ -0.1
CIT-205ENST00000488203 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
CIT-205ENST00000488203 FBLN2P98095 1184 aa14.39□□□□□ -0.11
CIT-205ENST00000488203 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
CIT-205ENST00000488203 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
CIT-205ENST00000488203 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
CIT-205ENST00000488203 FAM50AQ14320 339 aaKnown RBP14.36□□□□□ -0.11
CIT-205ENST00000488203 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
CIT-205ENST00000488203 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
CIT-205ENST00000488203 MTUS2Q5JR59 1369 aa14.32□□□□□ -0.12
CIT-205ENST00000488203 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
CIT-205ENST00000488203 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
CIT-205ENST00000488203 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
CIT-205ENST00000488203 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
CIT-205ENST00000488203 UGGT2Q9NYU1 1516 aa14.3□□□□□ -0.12
CIT-205ENST00000488203 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
CIT-205ENST00000488203 DISP1Q96F81 1524 aa14.28□□□□□ -0.12
CIT-205ENST00000488203 CEP170Q5SW79 1584 aa14.27□□□□□ -0.13
CIT-205ENST00000488203 MAGI3Q5TCQ9 1506 aa14.25□□□□□ -0.13
CIT-205ENST00000488203 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
CIT-205ENST00000488203 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
CIT-205ENST00000488203 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
CIT-205ENST00000488203 KIAA0556O60303 1618 aa14.23□□□□□ -0.13
CIT-205ENST00000488203 FGD6Q6ZV73 1430 aa14.23□□□□□ -0.13
CIT-205ENST00000488203 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
CIT-205ENST00000488203 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
CIT-205ENST00000488203 HECW1Q76N89 1606 aa14.22□□□□□ -0.13
CIT-205ENST00000488203 CCDC18Q5T9S5 1454 aa14.21□□□□□ -0.13
CIT-205ENST00000488203 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.14
CIT-205ENST00000488203 NUP160Q12769 1436 aa14.2□□□□□ -0.14
CIT-205ENST00000488203 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
CIT-205ENST00000488203 EHBP1L1Q8N3D4 1523 aa14.19□□□□□ -0.14
CIT-205ENST00000488203 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
CIT-205ENST00000488203 SUPT6HQ7KZ85 1726 aaKnown RBP14.17□□□□□ -0.14
CIT-205ENST00000488203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.16□□□□□ -0.14
CIT-205ENST00000488203 PTPRKQ15262 1439 aa14.16□□□□□ -0.14
CIT-205ENST00000488203 NUP153P49790 1475 aaKnown RBP14.16□□□□□ -0.14
CIT-205ENST00000488203 CLSPNQ9HAW4 1339 aa14.15□□□□□ -0.14
CIT-205ENST00000488203 PLB1Q6P1J6 1458 aa14.15□□□□□ -0.14
CIT-205ENST00000488203 ARHGEF11O15085 1522 aa14.14□□□□□ -0.15
CIT-205ENST00000488203 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
CIT-205ENST00000488203 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
CIT-205ENST00000488203 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
CIT-205ENST00000488203 DIEXFQ68CQ4 756 aaKnown RBP14.11□□□□□ -0.15
CIT-205ENST00000488203 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
CIT-205ENST00000488203 PTPN23Q9H3S7 1636 aa14.1□□□□□ -0.15
CIT-205ENST00000488203 MAPKBP1O60336 1514 aa14.09□□□□□ -0.15
CIT-205ENST00000488203 PRG4Q92954 1404 aaPredicted RBP14.09□□□□□ -0.15
CIT-205ENST00000488203 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
CIT-205ENST00000488203 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
CIT-205ENST00000488203 RRP7BPQ9NSQ0 103 aa14.07□□□□□ -0.16
CIT-205ENST00000488203 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
CIT-205ENST00000488203 ZNF644Q9H582 1327 aaPredicted RBP14.06□□□□□ -0.16
CIT-205ENST00000488203 CHD1O14646 1710 aa14.06□□□□□ -0.16
CIT-205ENST00000488203 TCOF1Q13428 1488 aaKnown RBP14.04□□□□□ -0.16
CIT-205ENST00000488203 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
CIT-205ENST00000488203 NAIPQ13075 1403 aa14.04□□□□□ -0.16
CIT-205ENST00000488203 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
CIT-205ENST00000488203 PTPRGP23470 1445 aa14.02□□□□□ -0.17
CIT-205ENST00000488203 TROQ12816 1431 aaPredicted RBP14.02□□□□□ -0.17
CIT-205ENST00000488203 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
CIT-205ENST00000488203 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
CIT-205ENST00000488203 ABCA8O94911 1581 aa14.01□□□□□ -0.17
CIT-205ENST00000488203 ATP10BO94823 1461 aa14□□□□□ -0.17
CIT-205ENST00000488203 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
CIT-205ENST00000488203 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
CIT-205ENST00000488203 KIF14Q15058 1648 aa13.98□□□□□ -0.17
CIT-205ENST00000488203 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
CIT-205ENST00000488203 ERCC6L2Q5T890 1561 aa13.97□□□□□ -0.17
CIT-205ENST00000488203 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.17
CIT-205ENST00000488203 ABCC5O15440 1437 aa13.96□□□□□ -0.18
CIT-205ENST00000488203 UACAQ9BZF9 1416 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms